RNA–Protein interactions for RNA: ENST00000417521.5

DDR1-231, Transcript of discoidin domain receptor tyrosine kinase 1, human

TSL 5

Gene DDR1, Length 1,479 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDR1-231	ENST00000417521	TEC	P42680	631 aa		18.26	■□□□□ 0.51
DDR1-231	ENST00000417521	EMC2	Q15006	297 aa		18.26	■□□□□ 0.51
DDR1-231	ENST00000417521	PAN2	Q504Q3	1202 aa	Known RBP	18.26	■□□□□ 0.51
DDR1-231	ENST00000417521	FAM102B	Q5T8I3	360 aa		18.26	■□□□□ 0.51
DDR1-231	ENST00000417521	MCTP1	Q6DN14	999 aa		18.26	■□□□□ 0.51
DDR1-231	ENST00000417521	KSR1	Q8IVT5	923 aa		18.26	■□□□□ 0.51
DDR1-231	ENST00000417521	C4orf32	Q8N8J7	132 aa		18.26	■□□□□ 0.51
DDR1-231	ENST00000417521	SYMPK	Q92797	1274 aa	Known RBP	18.26	■□□□□ 0.51
DDR1-231	ENST00000417521	P2RX5	Q93086	422 aa		18.26	■□□□□ 0.51
DDR1-231	ENST00000417521	TMEM143	Q96AN5	459 aa		18.26	■□□□□ 0.51
DDR1-231	ENST00000417521	NLRP4	Q96MN2	994 aa		18.26	■□□□□ 0.51
DDR1-231	ENST00000417521	ASB2	Q96Q27	587 aa		18.26	■□□□□ 0.51
DDR1-231	ENST00000417521	POLR3C	Q9BUI4	534 aa	Predicted RBP	18.26	■□□□□ 0.51
DDR1-231	ENST00000417521	LMAN2L	Q9H0V9	348 aa		18.26	■□□□□ 0.51
DDR1-231	ENST00000417521	IFT122	Q9HBG6	1241 aa		18.26	■□□□□ 0.51
DDR1-231	ENST00000417521	TUFT1	Q9NNX1	390 aa		18.26	■□□□□ 0.51
DDR1-231	ENST00000417521	PRRC2B	Q5JSZ5	2229 aa	Known RBP	18.25	■□□□□ 0.51
DDR1-231	ENST00000417521	HOXA2	O43364	376 aa		18.25	■□□□□ 0.51
DDR1-231	ENST00000417521	DGAT1	O75907	488 aa		18.25	■□□□□ 0.51
DDR1-231	ENST00000417521	GATM	P50440	423 aa		18.25	■□□□□ 0.51
DDR1-231	ENST00000417521	LAMTOR4	Q0VGL1	99 aa		18.25	■□□□□ 0.51
DDR1-231	ENST00000417521	AAK1	Q2M2I8	961 aa		18.25	■□□□□ 0.51
DDR1-231	ENST00000417521	SRGAP1	Q7Z6B7	1085 aa		18.25	■□□□□ 0.51
DDR1-231	ENST00000417521	CATSPER3	Q86XQ3	398 aa		18.25	■□□□□ 0.51
DDR1-231	ENST00000417521	ECHDC2	Q86YB7	292 aa		18.25	■□□□□ 0.51
DDR1-231	ENST00000417521	ERMN	Q8TAM6	284 aa		18.25	■□□□□ 0.51
DDR1-231	ENST00000417521	MTR	Q99707	1265 aa		18.25	■□□□□ 0.51
DDR1-231	ENST00000417521	TRAIP	Q9BWF2	469 aa		18.25	■□□□□ 0.51
DDR1-231	ENST00000417521	MYH9	P35579	1960 aa	Known RBP	18.24	■□□□□ 0.51
DDR1-231	ENST00000417521	TBKBP1	A7MCY6	615 aa		18.24	■□□□□ 0.51
DDR1-231	ENST00000417521	EOMES	O95936	686 aa		18.24	■□□□□ 0.51
DDR1-231	ENST00000417521	RARRES1	P49788	294 aa		18.24	■□□□□ 0.51
DDR1-231	ENST00000417521	TOB1	P50616	345 aa	Predicted RBP	18.24	■□□□□ 0.51
DDR1-231	ENST00000417521	MXD4	Q14582	209 aa	Predicted RBP	18.24	■□□□□ 0.51
DDR1-231	ENST00000417521	TIGD5	Q53EQ6	642 aa		18.24	■□□□□ 0.51
DDR1-231	ENST00000417521	FERMT3	Q86UX7	667 aa		18.24	■□□□□ 0.51
DDR1-231	ENST00000417521	PIGO	Q8TEQ8	1089 aa		18.24	■□□□□ 0.51
DDR1-231	ENST00000417521	HLA-C	Q95604	372 aa		18.24	■□□□□ 0.51
DDR1-231	ENST00000417521	CCDC43	Q96MW1	224 aa	Known RBP	18.24	■□□□□ 0.51
DDR1-231	ENST00000417521	TMEM117	Q9H0C3	514 aa		18.24	■□□□□ 0.51
DDR1-231	ENST00000417521	XPNPEP1	Q9NQW7	623 aa		18.24	■□□□□ 0.51
DDR1-231	ENST00000417521	VCAN	P13611	3396 aa		18.23	■□□□□ 0.51
DDR1-231	ENST00000417521	STX6	O43752	255 aa		18.23	■□□□□ 0.51
DDR1-231	ENST00000417521	SRGAP2C	P0DJJ0	459 aa		18.23	■□□□□ 0.51
DDR1-231	ENST00000417521	FGFR1	P11362	822 aa		18.23	■□□□□ 0.51
DDR1-231	ENST00000417521	MUT	P22033	750 aa		18.23	■□□□□ 0.51
DDR1-231	ENST00000417521	RPA1	P27694	616 aa		18.23	■□□□□ 0.51
DDR1-231	ENST00000417521	FXR2	P51116	673 aa	Known RBP eCLIP	18.23	■□□□□ 0.51	4e-6	■■■□□ 15.1
DDR1-231	ENST00000417521	POU5F1B	Q06416	359 aa		18.23	■□□□□ 0.51
DDR1-231	ENST00000417521	PDIA5	Q14554	519 aa		18.23	■□□□□ 0.51
DDR1-231	ENST00000417521	NBR1	Q14596	966 aa		18.23	■□□□□ 0.51
DDR1-231	ENST00000417521	CATSPER4	Q7RTX7	472 aa		18.23	■□□□□ 0.51
DDR1-231	ENST00000417521	NACC1	Q96RE7	527 aa		18.23	■□□□□ 0.51
DDR1-231	ENST00000417521	BMP2K	Q9NSY1	1161 aa	Predicted RBP	18.23	■□□□□ 0.51
DDR1-231	ENST00000417521	PLAGL2	Q9UPG8	496 aa		18.23	■□□□□ 0.51
DDR1-231	ENST00000417521	MTMR6	Q9Y217	621 aa		18.23	■□□□□ 0.51
DDR1-231	ENST00000417521	PCDHB6	Q9Y5E3	794 aa		18.23	■□□□□ 0.51
DDR1-231	ENST00000417521	LAD1	O00515	517 aa		18.22	■□□□□ 0.51
DDR1-231	ENST00000417521	GRM6	O15303	877 aa		18.22	■□□□□ 0.51
DDR1-231	ENST00000417521	MED24	O75448	989 aa		18.22	■□□□□ 0.51
DDR1-231	ENST00000417521	PTGDR	Q13258	359 aa		18.22	■□□□□ 0.51
DDR1-231	ENST00000417521	RILPL1	Q5EBL4	403 aa		18.22	■□□□□ 0.51
DDR1-231	ENST00000417521	ZNF598	Q86UK7	904 aa	Known RBP	18.22	■□□□□ 0.51
DDR1-231	ENST00000417521	RNF149	Q8NC42	400 aa		18.22	■□□□□ 0.51
DDR1-231	ENST00000417521	AAAS	Q9NRG9	546 aa		18.22	■□□□□ 0.51
DDR1-231	ENST00000417521	TYW1	Q9NV66	732 aa	Known RBP	18.22	■□□□□ 0.51
DDR1-231	ENST00000417521	DBR1	Q9UK59	544 aa	Known RBP	18.22	■□□□□ 0.51
DDR1-231	ENST00000417521	PIN4	Q9Y237	131 aa	Known RBP	18.22	■□□□□ 0.51
DDR1-231	ENST00000417521	STK24	Q9Y6E0	443 aa		18.22	■□□□□ 0.51
DDR1-231	ENST00000417521	SKI	P12755	728 aa		18.21	■□□□□ 0.51
DDR1-231	ENST00000417521	PKP1	Q13835	747 aa		18.21	■□□□□ 0.51
DDR1-231	ENST00000417521	PCBP1	Q15365	356 aa	Known RBP eCLIP	18.21	■□□□□ 0.51
DDR1-231	ENST00000417521	HAUS3	Q68CZ6	603 aa		18.21	■□□□□ 0.51
DDR1-231	ENST00000417521	ABI1	Q8IZP0	508 aa		18.21	■□□□□ 0.51
DDR1-231	ENST00000417521	KLHL23	Q8NBE8	558 aa		18.21	■□□□□ 0.51
DDR1-231	ENST00000417521	RSPH1	Q8WYR4	309 aa		18.21	■□□□□ 0.51
DDR1-231	ENST00000417521	CASD1	Q96PB1	797 aa		18.21	■□□□□ 0.51
DDR1-231	ENST00000417521	RAB34	Q9BZG1	259 aa		18.21	■□□□□ 0.51
DDR1-231	ENST00000417521	NSUN3	Q9H649	340 aa	Known RBP	18.21	■□□□□ 0.51
DDR1-231	ENST00000417521	EIF4ENIF1	Q9NRA8	985 aa	Known RBP	18.21	■□□□□ 0.51
DDR1-231	ENST00000417521	RNF19A	Q9NV58	838 aa		18.21	■□□□□ 0.51
DDR1-231	ENST00000417521	LRWD1	Q9UFC0	647 aa		18.21	■□□□□ 0.51
DDR1-231	ENST00000417521	PCDHB12	Q9Y5F1	795 aa		18.21	■□□□□ 0.51
DDR1-231	ENST00000417521	ZNF623	O75123	536 aa		18.2	■□□□□ 0.5
DDR1-231	ENST00000417521	ITGB1	P05556	798 aa		18.2	■□□□□ 0.5
DDR1-231	ENST00000417521	ARL2	P36404	184 aa		18.2	■□□□□ 0.5
DDR1-231	ENST00000417521	PRPH	P41219	470 aa		18.2	■□□□□ 0.5
DDR1-231	ENST00000417521	PHKA2	P46019	1235 aa		18.2	■□□□□ 0.5
DDR1-231	ENST00000417521	PTEN	P60484	403 aa		18.2	■□□□□ 0.5
DDR1-231	ENST00000417521	TFF2	Q03403	129 aa		18.2	■□□□□ 0.5
DDR1-231	ENST00000417521	TFDP1	Q14186	410 aa		18.2	■□□□□ 0.5
DDR1-231	ENST00000417521	CSPP1	Q1MSJ5	1256 aa		18.2	■□□□□ 0.5
DDR1-231	ENST00000417521	SPOUT1	Q5T280	376 aa	Known RBP	18.2	■□□□□ 0.5
DDR1-231	ENST00000417521	TWF2	Q6IBS0	349 aa	Known RBP	18.2	■□□□□ 0.5
DDR1-231	ENST00000417521	IFNLR1	Q8IU57	520 aa	Predicted RBP	18.2	■□□□□ 0.5
DDR1-231	ENST00000417521	IGSF22	Q8N9C0	903 aa		18.2	■□□□□ 0.5
DDR1-231	ENST00000417521	RNF169	Q8NCN4	708 aa		18.2	■□□□□ 0.5
DDR1-231	ENST00000417521	SPPL3	Q8TCT6	385 aa		18.2	■□□□□ 0.5
DDR1-231	ENST00000417521	MINDY3	Q9H8M7	445 aa		18.2	■□□□□ 0.5
DDR1-231	ENST00000417521	ALG13	Q9NP73	1137 aa	Known RBP	18.2	■□□□□ 0.5

Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms