RNA–Protein interactions for RNA: ENST00000417389.1

TM9SF4-203, Transcript of transmembrane 9 superfamily member 4, humanhuman

TSL 4

Gene TM9SF4, Length 553 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-203ENST00000417389 LRRIQ4A6NIV6 560 aa12.28□□□□□ -0.44
TM9SF4-203ENST00000417389 INO80B-WBP1J3KQ70 363 aa12.28□□□□□ -0.44
TM9SF4-203ENST00000417389 RFXAPO00287 272 aa12.28□□□□□ -0.44
TM9SF4-203ENST00000417389 GTPBP6O43824 516 aaPredicted RBP12.28□□□□□ -0.44
TM9SF4-203ENST00000417389 MGEA5O60502 916 aa12.28□□□□□ -0.44
TM9SF4-203ENST00000417389 ERLIN2O94905 339 aa12.28□□□□□ -0.44
TM9SF4-203ENST00000417389 LIG1P18858 919 aa12.28□□□□□ -0.44
TM9SF4-203ENST00000417389 MUTP22033 750 aa12.28□□□□□ -0.44
TM9SF4-203ENST00000417389 UBA7P41226 1012 aa12.28□□□□□ -0.44
TM9SF4-203ENST00000417389 SARSP49591 514 aaKnown RBP12.28□□□□□ -0.44
TM9SF4-203ENST00000417389 NCBP1Q09161 790 aaKnown RBP12.28□□□□□ -0.44
TM9SF4-203ENST00000417389 RESTQ13127 1097 aa12.28□□□□□ -0.44
TM9SF4-203ENST00000417389 IL17AQ16552 155 aa12.28□□□□□ -0.44
TM9SF4-203ENST00000417389 TMEM132AQ24JP5 1023 aa12.28□□□□□ -0.44
TM9SF4-203ENST00000417389 FOXD4L6Q3SYB3 417 aaPredicted RBP12.28□□□□□ -0.44
TM9SF4-203ENST00000417389 ARL6IP4Q66PJ3 421 aaKnown RBP12.28□□□□□ -0.44
TM9SF4-203ENST00000417389 FOXD4L3Q6VB84 417 aaPredicted RBP12.28□□□□□ -0.44
TM9SF4-203ENST00000417389 ABI1Q8IZP0 508 aa12.28□□□□□ -0.44
TM9SF4-203ENST00000417389 MCPH1Q8NEM0 835 aa12.28□□□□□ -0.44
TM9SF4-203ENST00000417389 CALML4Q96GE6 196 aa12.28□□□□□ -0.44
TM9SF4-203ENST00000417389 ZSCAN16Q9H4T2 348 aaPredicted RBP12.28□□□□□ -0.44
TM9SF4-203ENST00000417389 RGS18Q9NS28 235 aa12.28□□□□□ -0.44
TM9SF4-203ENST00000417389 DACT1Q9NYF0 836 aa12.28□□□□□ -0.44
TM9SF4-203ENST00000417389 GBF1Q92538 1859 aa12.27□□□□□ -0.44
TM9SF4-203ENST00000417389 E9PMD0 336 aa12.27□□□□□ -0.45
TM9SF4-203ENST00000417389 ARHGEF15O94989 841 aa12.27□□□□□ -0.45
TM9SF4-203ENST00000417389 MARCKSP29966 332 aaPredicted RBP12.27□□□□□ -0.45
TM9SF4-203ENST00000417389 HTRA4P83105 476 aaPredicted RBP12.27□□□□□ -0.45
TM9SF4-203ENST00000417389 BECN1Q14457 450 aa12.27□□□□□ -0.45
TM9SF4-203ENST00000417389 ECM1Q16610 540 aa12.27□□□□□ -0.45
TM9SF4-203ENST00000417389 SRGAP1Q7Z6B7 1085 aa12.27□□□□□ -0.45
TM9SF4-203ENST00000417389 CABP7Q86V35 215 aa12.27□□□□□ -0.45
TM9SF4-203ENST00000417389 FBXO22Q8NEZ5 403 aa12.27□□□□□ -0.45
TM9SF4-203ENST00000417389 MAFAQ8NHW3 353 aaPredicted RBP12.27□□□□□ -0.45
TM9SF4-203ENST00000417389 ASAP3Q8TDY4 903 aa12.27□□□□□ -0.45
TM9SF4-203ENST00000417389 C17orf80Q9BSJ5 609 aa12.27□□□□□ -0.45
TM9SF4-203ENST00000417389 NT5C3AQ9H0P0 336 aa12.27□□□□□ -0.45
TM9SF4-203ENST00000417389 GPRC5CQ9NQ84 441 aa12.27□□□□□ -0.45
TM9SF4-203ENST00000417389 XPNPEP1Q9NQW7 623 aa12.27□□□□□ -0.45
TM9SF4-203ENST00000417389 CLIC4Q9Y696 253 aa12.27□□□□□ -0.45
TM9SF4-203ENST00000417389 ADGRA3Q8IWK6 1321 aa12.27□□□□□ -0.45
TM9SF4-203ENST00000417389 TBKBP1A7MCY6 615 aa12.26□□□□□ -0.45
TM9SF4-203ENST00000417389 DGKIO75912 1065 aa12.26□□□□□ -0.45
TM9SF4-203ENST00000417389 CTNNB1P35222 781 aa12.26□□□□□ -0.45
TM9SF4-203ENST00000417389 GATMP50440 423 aa12.26□□□□□ -0.45
TM9SF4-203ENST00000417389 DHX8Q14562 1220 aaKnown RBP12.26□□□□□ -0.45
TM9SF4-203ENST00000417389 STK38Q15208 465 aa12.26□□□□□ -0.45
TM9SF4-203ENST00000417389 SKIV2LQ15477 1246 aaKnown RBP12.26□□□□□ -0.45
TM9SF4-203ENST00000417389 CCDC85BQ15834 202 aaPredicted RBP12.26□□□□□ -0.45
TM9SF4-203ENST00000417389 LONRF3Q496Y0 759 aa12.26□□□□□ -0.45
TM9SF4-203ENST00000417389 FAM43BQ6ZT52 329 aaPredicted RBP12.26□□□□□ -0.45
TM9SF4-203ENST00000417389 SPRED2Q7Z698 418 aa12.26□□□□□ -0.45
TM9SF4-203ENST00000417389 ZBTB8OSQ8IWT0 167 aa12.26□□□□□ -0.45
TM9SF4-203ENST00000417389 GDPD5Q8WTR4 605 aa12.26□□□□□ -0.45
TM9SF4-203ENST00000417389 IFT74Q96LB3 600 aa12.26□□□□□ -0.45
TM9SF4-203ENST00000417389 AK8Q96MA6 479 aa12.26□□□□□ -0.45
TM9SF4-203ENST00000417389 ZNF396Q96N95 335 aaPredicted RBP12.26□□□□□ -0.45
TM9SF4-203ENST00000417389 IFT122Q9HBG6 1241 aa12.26□□□□□ -0.45
TM9SF4-203ENST00000417389 CHST12Q9NRB3 414 aa12.26□□□□□ -0.45
TM9SF4-203ENST00000417389 DAXXQ9UER7 740 aaPredicted RBP12.26□□□□□ -0.45
TM9SF4-203ENST00000417389 LOXHD1Q8IVV2 1947 aa12.26□□□□□ -0.45
TM9SF4-203ENST00000417389 C9IYK1 514 aa12.25□□□□□ -0.45
TM9SF4-203ENST00000417389 HOXA2O43364 376 aa12.25□□□□□ -0.45
TM9SF4-203ENST00000417389 CSPG5O95196 566 aa12.25□□□□□ -0.45
TM9SF4-203ENST00000417389 EYA4O95677 639 aa12.25□□□□□ -0.45
TM9SF4-203ENST00000417389 FGFR1P11362 822 aa12.25□□□□□ -0.45
TM9SF4-203ENST00000417389 PDIA4P13667 645 aaKnown RBP12.25□□□□□ -0.45
TM9SF4-203ENST00000417389 CYP11B2P19099 503 aa12.25□□□□□ -0.45
TM9SF4-203ENST00000417389 GLRA2P23416 452 aa12.25□□□□□ -0.45
TM9SF4-203ENST00000417389 ARL2P36404 184 aa12.25□□□□□ -0.45
TM9SF4-203ENST00000417389 LONP1P36776 959 aaKnown RBP12.25□□□□□ -0.45
TM9SF4-203ENST00000417389 TXLNAP40222 546 aa12.25□□□□□ -0.45
TM9SF4-203ENST00000417389 ERVK-21P61565 698 aa12.25□□□□□ -0.45
TM9SF4-203ENST00000417389 CAPSQ13938 189 aa12.25□□□□□ -0.45
TM9SF4-203ENST00000417389 DEPTORQ8TB45 409 aa12.25□□□□□ -0.45
TM9SF4-203ENST00000417389 SAMD11Q96NU1 681 aa12.25□□□□□ -0.45
TM9SF4-203ENST00000417389 POLD4Q9HCU8 107 aa12.25□□□□□ -0.45
TM9SF4-203ENST00000417389 TMEM161AQ9NX61 479 aa12.25□□□□□ -0.45
TM9SF4-203ENST00000417389 PTPRSQ13332 1948 aa12.25□□□□□ -0.45
TM9SF4-203ENST00000417389 MYO9BQ13459 2157 aa12.25□□□□□ -0.45
TM9SF4-203ENST00000417389 EPOPA6NHQ4 379 aa12.24□□□□□ -0.45
TM9SF4-203ENST00000417389 CCDC169A6NNP5 214 aa12.24□□□□□ -0.45
TM9SF4-203ENST00000417389 KRT18P05783 430 aaKnown RBP12.24□□□□□ -0.45
TM9SF4-203ENST00000417389 ZSCAN22P10073 491 aaPredicted RBP12.24□□□□□ -0.45
TM9SF4-203ENST00000417389 SKIP12755 728 aa12.24□□□□□ -0.45
TM9SF4-203ENST00000417389 PTENP60484 403 aa12.24□□□□□ -0.45
TM9SF4-203ENST00000417389 RAD51AP2Q09MP3 1159 aa12.24□□□□□ -0.45
TM9SF4-203ENST00000417389 GRB10Q13322 594 aa12.24□□□□□ -0.45
TM9SF4-203ENST00000417389 ADGRE1Q14246 886 aa12.24□□□□□ -0.45
TM9SF4-203ENST00000417389 DSC3Q14574 896 aa12.24□□□□□ -0.45
TM9SF4-203ENST00000417389 PPP2R5AQ15172 486 aa12.24□□□□□ -0.45
TM9SF4-203ENST00000417389 EPC2Q52LR7 807 aa12.24□□□□□ -0.45
TM9SF4-203ENST00000417389 SPECC1Q5M775 1068 aa12.24□□□□□ -0.45
TM9SF4-203ENST00000417389 ECHDC2Q86YB7 292 aa12.24□□□□□ -0.45
TM9SF4-203ENST00000417389 TMEM192Q8IY95 271 aa12.24□□□□□ -0.45
TM9SF4-203ENST00000417389 CMTR2Q8IYT2 770 aaKnown RBP12.24□□□□□ -0.45
TM9SF4-203ENST00000417389 SP7Q8TDD2 431 aaPredicted RBP12.24□□□□□ -0.45
TM9SF4-203ENST00000417389 KIFAP3Q92845 792 aa12.24□□□□□ -0.45
TM9SF4-203ENST00000417389 USP28Q96RU2 1077 aa12.24□□□□□ -0.45
TM9SF4-203ENST00000417389 MMTAG2Q9BU76 263 aaKnown RBP12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms