RNA–Protein interactions for RNA: ENST00000417122.6

ITGB1-204, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-204ENST00000417122 DACT1Q9NYF0 836 aa17.44■□□□□ 0.38
ITGB1-204ENST00000417122 ATG2AQ2TAZ0 1938 aa17.44■□□□□ 0.38
ITGB1-204ENST00000417122 REV3LO60673 3130 aa17.44■□□□□ 0.38
ITGB1-204ENST00000417122 FGFR1P11362 822 aa17.43■□□□□ 0.38
ITGB1-204ENST00000417122 NAALADL2Q58DX5 795 aa17.43■□□□□ 0.38
ITGB1-204ENST00000417122 ECHDC2Q86YB7 292 aa17.43■□□□□ 0.38
ITGB1-204ENST00000417122 IFT122Q9HBG6 1241 aa17.43■□□□□ 0.38
ITGB1-204ENST00000417122 ALG13Q9NP73 1137 aaKnown RBP17.43■□□□□ 0.38
ITGB1-204ENST00000417122 A0A0U1RQF3 1178 aa17.42■□□□□ 0.38
ITGB1-204ENST00000417122 ASAP2O43150 1006 aa17.42■□□□□ 0.38
ITGB1-204ENST00000417122 HOXA2O43364 376 aa17.42■□□□□ 0.38
ITGB1-204ENST00000417122 DGAT1O75907 488 aa17.42■□□□□ 0.38
ITGB1-204ENST00000417122 SRGAP2CP0DJJ0 459 aa17.42■□□□□ 0.38
ITGB1-204ENST00000417122 SPATA31C1P0DKV0 1188 aa17.42■□□□□ 0.38
ITGB1-204ENST00000417122 XRCC6P12956 609 aaKnown RBP eCLIP17.42■□□□□ 0.38
ITGB1-204ENST00000417122 GJB2P29033 226 aa17.42■□□□□ 0.38
ITGB1-204ENST00000417122 LAMTOR4Q0VGL1 99 aa17.42■□□□□ 0.38
ITGB1-204ENST00000417122 NBR1Q14596 966 aa17.42■□□□□ 0.38
ITGB1-204ENST00000417122 SPOUT1Q5T280 376 aaKnown RBP17.42■□□□□ 0.38
ITGB1-204ENST00000417122 CATSPER4Q7RTX7 472 aa17.42■□□□□ 0.38
ITGB1-204ENST00000417122 FERMT3Q86UX7 667 aa17.42■□□□□ 0.38
ITGB1-204ENST00000417122 CATSPER3Q86XQ3 398 aa17.42■□□□□ 0.38
ITGB1-204ENST00000417122 KLHL23Q8NBE8 558 aa17.42■□□□□ 0.38
ITGB1-204ENST00000417122 PIGOQ8TEQ8 1089 aa17.42■□□□□ 0.38
ITGB1-204ENST00000417122 CCDC43Q96MW1 224 aaKnown RBP17.42■□□□□ 0.38
ITGB1-204ENST00000417122 TMEM117Q9H0C3 514 aa17.42■□□□□ 0.38
ITGB1-204ENST00000417122 NSUN3Q9H649 340 aaKnown RBP17.42■□□□□ 0.38
ITGB1-204ENST00000417122 TUFT1Q9NNX1 390 aa17.42■□□□□ 0.38
ITGB1-204ENST00000417122 XPNPEP1Q9NQW7 623 aa17.42■□□□□ 0.38
ITGB1-204ENST00000417122 PLAGL2Q9UPG8 496 aa17.42■□□□□ 0.38
ITGB1-204ENST00000417122 SPTBN5Q9NRC6 3674 aaKnown RBP17.42■□□□□ 0.38
ITGB1-204ENST00000417122 A0A087WWV3 80 aa17.41■□□□□ 0.38
ITGB1-204ENST00000417122 MED24O75448 989 aa17.41■□□□□ 0.38
ITGB1-204ENST00000417122 EOMESO95936 686 aa17.41■□□□□ 0.38
ITGB1-204ENST00000417122 ITGB1P05556 798 aa17.41■□□□□ 0.38
ITGB1-204ENST00000417122 RARRES1P49788 294 aa17.41■□□□□ 0.38
ITGB1-204ENST00000417122 TOB1P50616 345 aaPredicted RBP17.41■□□□□ 0.38
ITGB1-204ENST00000417122 TCEAL5Q5H9L2 206 aa17.41■□□□□ 0.38
ITGB1-204ENST00000417122 TWF2Q6IBS0 349 aaKnown RBP17.41■□□□□ 0.38
ITGB1-204ENST00000417122 SRGAP1Q7Z6B7 1085 aa17.41■□□□□ 0.38
ITGB1-204ENST00000417122 ABI1Q8IZP0 508 aa17.41■□□□□ 0.38
ITGB1-204ENST00000417122 RNF149Q8NC42 400 aa17.41■□□□□ 0.38
ITGB1-204ENST00000417122 RNF169Q8NCN4 708 aa17.41■□□□□ 0.38
ITGB1-204ENST00000417122 ERMNQ8TAM6 284 aa17.41■□□□□ 0.38
ITGB1-204ENST00000417122 CASD1Q96PB1 797 aa17.41■□□□□ 0.38
ITGB1-204ENST00000417122 POLR3CQ9BUI4 534 aaPredicted RBP17.41■□□□□ 0.38
ITGB1-204ENST00000417122 AAASQ9NRG9 546 aa17.41■□□□□ 0.38
ITGB1-204ENST00000417122 RNF19AQ9NV58 838 aa17.41■□□□□ 0.38
ITGB1-204ENST00000417122 TYW1Q9NV66 732 aaKnown RBP17.41■□□□□ 0.38
ITGB1-204ENST00000417122 PIN4Q9Y237 131 aaKnown RBP17.41■□□□□ 0.38
ITGB1-204ENST00000417122 PCDHB12Q9Y5F1 795 aa17.41■□□□□ 0.38
ITGB1-204ENST00000417122 PLXNA4Q9HCM2 1894 aa17.41■□□□□ 0.38
ITGB1-204ENST00000417122 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.4■□□□□ 0.38
ITGB1-204ENST00000417122 BMP1P13497 986 aa17.4■□□□□ 0.38
ITGB1-204ENST00000417122 KCNQ1P51787 676 aa17.4■□□□□ 0.38
ITGB1-204ENST00000417122 MXD4Q14582 209 aaPredicted RBP17.4■□□□□ 0.38
ITGB1-204ENST00000417122 MCTP1Q6DN14 999 aa17.4■□□□□ 0.38
ITGB1-204ENST00000417122 ZNF598Q86UK7 904 aaKnown RBP17.4■□□□□ 0.38
ITGB1-204ENST00000417122 C4orf32Q8N8J7 132 aa17.4■□□□□ 0.38
ITGB1-204ENST00000417122 SPPL3Q8TCT6 385 aa17.4■□□□□ 0.38
ITGB1-204ENST00000417122 TRAIPQ9BWF2 469 aa17.4■□□□□ 0.38
ITGB1-204ENST00000417122 CWH43Q9H720 699 aa17.4■□□□□ 0.38
ITGB1-204ENST00000417122 UBE2ZQ9H832 354 aaPredicted RBP17.4■□□□□ 0.38
ITGB1-204ENST00000417122 MINDY3Q9H8M7 445 aa17.4■□□□□ 0.38
ITGB1-204ENST00000417122 HCSTQ9UBK5 93 aa17.4■□□□□ 0.38
ITGB1-204ENST00000417122 SMC3Q9UQE7 1217 aa17.4■□□□□ 0.38
ITGB1-204ENST00000417122 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.4■□□□□ 0.38
ITGB1-204ENST00000417122 PCDHB6Q9Y5E3 794 aa17.4■□□□□ 0.38
ITGB1-204ENST00000417122 TCF20Q9UGU0 1960 aaKnown RBP17.4■□□□□ 0.38
ITGB1-204ENST00000417122 H3BQV1 296 aa17.39■□□□□ 0.37
ITGB1-204ENST00000417122 CSPG5O95196 566 aa17.39■□□□□ 0.37
ITGB1-204ENST00000417122 SKIP12755 728 aa17.39■□□□□ 0.37
ITGB1-204ENST00000417122 ATF7P17544 494 aaPredicted RBP17.39■□□□□ 0.37
ITGB1-204ENST00000417122 RPA1P27694 616 aa17.39■□□□□ 0.37
ITGB1-204ENST00000417122 PHKA2P46019 1235 aa17.39■□□□□ 0.37
ITGB1-204ENST00000417122 FXR2P51116 673 aaKnown RBP eCLIP17.39■□□□□ 0.37
ITGB1-204ENST00000417122 CAMK1Q14012 370 aa17.39■□□□□ 0.37
ITGB1-204ENST00000417122 CLLU1OSQ5K130 101 aa17.39■□□□□ 0.37
ITGB1-204ENST00000417122 COLGALT1Q8NBJ5 622 aa17.39■□□□□ 0.37
ITGB1-204ENST00000417122 ADAMTS19Q8TE59 1207 aa17.39■□□□□ 0.37
ITGB1-204ENST00000417122 NACC1Q96RE7 527 aa17.39■□□□□ 0.37
ITGB1-204ENST00000417122 AGPAT5Q9NUQ2 364 aa17.39■□□□□ 0.37
ITGB1-204ENST00000417122 USO1O60763 962 aaKnown RBP17.38■□□□□ 0.37
ITGB1-204ENST00000417122 LAG3P18627 525 aa17.38■□□□□ 0.37
ITGB1-204ENST00000417122 DNAJB1P25685 340 aa17.38■□□□□ 0.37
ITGB1-204ENST00000417122 ARL2P36404 184 aa17.38■□□□□ 0.37
ITGB1-204ENST00000417122 RAB27AP51159 221 aa17.38■□□□□ 0.37
ITGB1-204ENST00000417122 PTGDRQ13258 359 aa17.38■□□□□ 0.37
ITGB1-204ENST00000417122 TFDP1Q14186 410 aa17.38■□□□□ 0.37
ITGB1-204ENST00000417122 CSPP1Q1MSJ5 1256 aa17.38■□□□□ 0.37
ITGB1-204ENST00000417122 HAUS3Q68CZ6 603 aa17.38■□□□□ 0.37
ITGB1-204ENST00000417122 POTEGQ6S5H5 508 aa17.38■□□□□ 0.37
ITGB1-204ENST00000417122 LRRC55Q6ZSA7 311 aa17.38■□□□□ 0.37
ITGB1-204ENST00000417122 LRRC43Q8N309 656 aa17.38■□□□□ 0.37
ITGB1-204ENST00000417122 HELQQ8TDG4 1101 aa17.38■□□□□ 0.37
ITGB1-204ENST00000417122 ASAP3Q8TDY4 903 aa17.38■□□□□ 0.37
ITGB1-204ENST00000417122 POF1BQ8WVV4 589 aa17.38■□□□□ 0.37
ITGB1-204ENST00000417122 BACH2Q9BYV9 841 aa17.38■□□□□ 0.37
ITGB1-204ENST00000417122 FAM105AQ9NUU6 356 aa17.38■□□□□ 0.37
ITGB1-204ENST00000417122 LRWD1Q9UFC0 647 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms