RNA–Protein interactions for RNA: ENST00000414861.6

RIF1-202, Transcript of replication timing regulatory factor 1, humanhuman

TSL 1 (best)

Gene RIF1, Length 2,534 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-202ENST00000414861 DUSP9Q99956 384 aaKnown RBP10.67□□□□□ -0.7
RIF1-202ENST00000414861 KATNAL1Q9BW62 490 aa10.67□□□□□ -0.7
RIF1-202ENST00000414861 PAK6Q9NQU5 681 aaPredicted RBP10.67□□□□□ -0.7
RIF1-202ENST00000414861 FANCLQ9NW38 375 aa10.67□□□□□ -0.7
RIF1-202ENST00000414861 HDAC6Q9UBN7 1215 aa10.67□□□□□ -0.7
RIF1-202ENST00000414861 GRIN2DO15399 1336 aa10.67□□□□□ -0.7
RIF1-202ENST00000414861 NRCAMQ92823 1304 aa10.67□□□□□ -0.7
RIF1-202ENST00000414861 EIF3DO15371 548 aaKnown RBP eCLIP10.67□□□□□ -0.7
RIF1-202ENST00000414861 GAS2O43903 313 aaKnown RBP10.67□□□□□ -0.7
RIF1-202ENST00000414861 KPNA6O60684 536 aa10.67□□□□□ -0.7
RIF1-202ENST00000414861 HOXC8P31273 242 aa10.67□□□□□ -0.7
RIF1-202ENST00000414861 ADAM17P78536 824 aa10.67□□□□□ -0.7
RIF1-202ENST00000414861 CT47A1Q5JQC4 288 aaPredicted RBP10.67□□□□□ -0.7
RIF1-202ENST00000414861 TAS1R3Q7RTX0 852 aa10.67□□□□□ -0.7
RIF1-202ENST00000414861 HAUS6Q7Z4H7 955 aa10.67□□□□□ -0.7
RIF1-202ENST00000414861 RNF180Q86T96 592 aa10.67□□□□□ -0.7
RIF1-202ENST00000414861 ZNF507Q8TCN5 953 aa10.67□□□□□ -0.7
RIF1-202ENST00000414861 SPIRE2Q8WWL2 714 aa10.67□□□□□ -0.7
RIF1-202ENST00000414861 C17orf75Q9HAS0 396 aa10.67□□□□□ -0.7
RIF1-202ENST00000414861 KMT5AQ9NQR1 393 aa10.67□□□□□ -0.7
RIF1-202ENST00000414861 SAMSN1Q9NSI8 373 aaKnown RBP10.67□□□□□ -0.7
RIF1-202ENST00000414861 ARHGAP28Q9P2N2 729 aa10.67□□□□□ -0.7
RIF1-202ENST00000414861 SUCLA2Q9P2R7 463 aaPredicted RBP10.67□□□□□ -0.7
RIF1-202ENST00000414861 MBLAC1A4D2B0 266 aaPredicted RBP10.66□□□□□ -0.7
RIF1-202ENST00000414861 LRRIQ4A6NIV6 560 aa10.66□□□□□ -0.7
RIF1-202ENST00000414861 ZEB2O60315 1214 aa10.66□□□□□ -0.7
RIF1-202ENST00000414861 MAPTP10636 758 aaKnown RBP10.66□□□□□ -0.7
RIF1-202ENST00000414861 ATP1A3P13637 1013 aa10.66□□□□□ -0.7
RIF1-202ENST00000414861 CTCFP49711 727 aaPredicted RBP10.66□□□□□ -0.7
RIF1-202ENST00000414861 MRE11P49959 708 aa10.66□□□□□ -0.7
RIF1-202ENST00000414861 LAMTOR4Q0VGL1 99 aa10.66□□□□□ -0.7
RIF1-202ENST00000414861 NBPF20Q3BBV1 942 aa10.66□□□□□ -0.7
RIF1-202ENST00000414861 IER5Q5VY09 327 aa10.66□□□□□ -0.7
RIF1-202ENST00000414861 NFRKBQ6P4R8 1299 aa10.66□□□□□ -0.7
RIF1-202ENST00000414861 RUFY4Q6ZNE9 571 aa10.66□□□□□ -0.7
RIF1-202ENST00000414861 PSPC1Q8WXF1 523 aaKnown RBP10.66□□□□□ -0.7
RIF1-202ENST00000414861 IFT74Q96LB3 600 aa10.66□□□□□ -0.7
RIF1-202ENST00000414861 PPP1R16BQ96T49 567 aa10.66□□□□□ -0.7
RIF1-202ENST00000414861 DENND3A2RUS2 1198 aa10.66□□□□□ -0.7
RIF1-202ENST00000414861 TISP43B9A030 160 aa10.66□□□□□ -0.7
RIF1-202ENST00000414861 GOLGA6L19H0YKK7 550 aa10.66□□□□□ -0.7
RIF1-202ENST00000414861 MAGEB2O15479 319 aa10.66□□□□□ -0.7
RIF1-202ENST00000414861 TREHO43280 583 aa10.66□□□□□ -0.7
RIF1-202ENST00000414861 CCL5P13501 91 aa10.66□□□□□ -0.7
RIF1-202ENST00000414861 PPP1R2P41236 205 aa10.66□□□□□ -0.7
RIF1-202ENST00000414861 NAMPTP43490 491 aa10.66□□□□□ -0.7
RIF1-202ENST00000414861 ACLYP53396 1101 aa10.66□□□□□ -0.7
RIF1-202ENST00000414861 KNOP1Q1ED39 458 aaKnown RBP10.66□□□□□ -0.7
RIF1-202ENST00000414861 SPATA1Q5VX52 437 aa10.66□□□□□ -0.7
RIF1-202ENST00000414861 RHPN2Q8IUC4 686 aa10.66□□□□□ -0.7
RIF1-202ENST00000414861 RETREG2Q8NC44 543 aa10.66□□□□□ -0.7
RIF1-202ENST00000414861 TCP11Q8WWU5 503 aa10.66□□□□□ -0.7
RIF1-202ENST00000414861 JPH2Q9BR39 696 aaPredicted RBP10.66□□□□□ -0.7
RIF1-202ENST00000414861 NTPCRQ9BSD7 190 aaKnown RBP10.66□□□□□ -0.7
RIF1-202ENST00000414861 ST6GALNAC4Q9H4F1 302 aa10.66□□□□□ -0.7
RIF1-202ENST00000414861 UBE4BO95155 1302 aa10.66□□□□□ -0.7
RIF1-202ENST00000414861 RRN3P2A6NIE6 340 aa10.65□□□□□ -0.7
RIF1-202ENST00000414861 SMTNL1A8MU46 457 aa10.65□□□□□ -0.7
RIF1-202ENST00000414861 TGFB1I1O43294 461 aa10.65□□□□□ -0.7
RIF1-202ENST00000414861 VTNP04004 478 aa10.65□□□□□ -0.7
RIF1-202ENST00000414861 ZNF18P17022 549 aa10.65□□□□□ -0.7
RIF1-202ENST00000414861 SMTNP53814 917 aa10.65□□□□□ -0.7
RIF1-202ENST00000414861 GTF2BQ00403 316 aa10.65□□□□□ -0.7
RIF1-202ENST00000414861 FBXO46Q6PJ61 603 aaPredicted RBP10.65□□□□□ -0.7
RIF1-202ENST00000414861 LRRC55Q6ZSA7 311 aa10.65□□□□□ -0.7
RIF1-202ENST00000414861 KIAA0319LQ8IZA0 1049 aa10.65□□□□□ -0.7
RIF1-202ENST00000414861 C7orf31Q8N865 590 aa10.65□□□□□ -0.7
RIF1-202ENST00000414861 PCSK9Q8NBP7 692 aaKnown RBP10.65□□□□□ -0.7
RIF1-202ENST00000414861 RNF149Q8NC42 400 aa10.65□□□□□ -0.7
RIF1-202ENST00000414861 NLRP4Q96MN2 994 aa10.65□□□□□ -0.7
RIF1-202ENST00000414861 DEFB118Q96PH6 123 aa10.65□□□□□ -0.7
RIF1-202ENST00000414861 FAM49AQ9H0Q0 323 aaPredicted RBP10.65□□□□□ -0.7
RIF1-202ENST00000414861 RNF208Q9H0X6 261 aa10.65□□□□□ -0.7
RIF1-202ENST00000414861 USP20Q9Y2K6 914 aa10.65□□□□□ -0.7
RIF1-202ENST00000414861 EDN1P05305 212 aa10.65□□□□□ -0.7
RIF1-202ENST00000414861 SRGAP2CP0DJJ0 459 aa10.65□□□□□ -0.7
RIF1-202ENST00000414861 CDKAL1Q5VV42 579 aa10.65□□□□□ -0.7
RIF1-202ENST00000414861 EXOC8Q8IYI6 725 aa10.65□□□□□ -0.7
RIF1-202ENST00000414861 ZNF333Q96JL9 665 aa10.65□□□□□ -0.7
RIF1-202ENST00000414861 GTF2IRD1Q9UHL9 959 aa10.65□□□□□ -0.7
RIF1-202ENST00000414861 TBX20Q9UMR3 447 aa10.65□□□□□ -0.7
RIF1-202ENST00000414861 AKT3Q9Y243 479 aa10.65□□□□□ -0.7
RIF1-202ENST00000414861 PCDHB13Q9Y5F0 798 aa10.65□□□□□ -0.7
RIF1-202ENST00000414861 BICDL2A1A5D9 508 aa10.64□□□□□ -0.71
RIF1-202ENST00000414861 C17orf102A2RUQ5 167 aa10.64□□□□□ -0.71
RIF1-202ENST00000414861 KIF20AO95235 890 aa10.64□□□□□ -0.71
RIF1-202ENST00000414861 LRRC63Q05C16 580 aa10.64□□□□□ -0.71
RIF1-202ENST00000414861 ALCAMQ13740 583 aa10.64□□□□□ -0.71
RIF1-202ENST00000414861 MXD4Q14582 209 aaPredicted RBP10.64□□□□□ -0.71
RIF1-202ENST00000414861 PPP2R5AQ15172 486 aa10.64□□□□□ -0.71
RIF1-202ENST00000414861 UVSSAQ2YD98 709 aa10.64□□□□□ -0.71
RIF1-202ENST00000414861 FAM47CQ5HY64 1035 aa10.64□□□□□ -0.71
RIF1-202ENST00000414861 CDCA2Q69YH5 1023 aaPredicted RBP10.64□□□□□ -0.71
RIF1-202ENST00000414861 GDF6Q6KF10 455 aaPredicted RBP10.64□□□□□ -0.71
RIF1-202ENST00000414861 IRF2BP1Q8IU81 584 aa10.64□□□□□ -0.71
RIF1-202ENST00000414861 MAP4K3Q8IVH8 894 aa10.64□□□□□ -0.71
RIF1-202ENST00000414861 CSGALNACT2Q8N6G5 542 aa10.64□□□□□ -0.71
RIF1-202ENST00000414861 DEPTORQ8TB45 409 aa10.64□□□□□ -0.71
RIF1-202ENST00000414861 CTAGE1Q96RT6 745 aa10.64□□□□□ -0.71
RIF1-202ENST00000414861 TYW1Q9NV66 732 aaKnown RBP10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms