RNA–Protein interactions for RNA: ENST00000414411.3

DDB1-202, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,904 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-202ENST00000414411 ZNF484Q5JVG2 852 aa10.99□□□□□ -0.65
DDB1-202ENST00000414411 MARCH8Q5T0T0 291 aa10.99□□□□□ -0.65
DDB1-202ENST00000414411 CNNM4Q6P4Q7 775 aa10.99□□□□□ -0.65
DDB1-202ENST00000414411 PADI6Q6TGC4 694 aa10.99□□□□□ -0.65
DDB1-202ENST00000414411 ANKRD7Q92527 254 aa10.99□□□□□ -0.65
DDB1-202ENST00000414411 STAMQ92783 540 aa10.99□□□□□ -0.65
DDB1-202ENST00000414411 CEP170P1Q96L14 293 aa10.99□□□□□ -0.65
DDB1-202ENST00000414411 DHX33Q9H6R0 707 aaKnown RBP10.99□□□□□ -0.65
DDB1-202ENST00000414411 SAMSN1Q9NSI8 373 aaKnown RBP10.99□□□□□ -0.65
DDB1-202ENST00000414411 IGKV6-21A0A0C4DH24 114 aa10.98□□□□□ -0.65
DDB1-202ENST00000414411 A0A1W2PQ45 241 aaPredicted RBP10.98□□□□□ -0.65
DDB1-202ENST00000414411 A0A1W2PQY0 241 aa10.98□□□□□ -0.65
DDB1-202ENST00000414411 TFRCP02786 760 aaKnown RBP10.98□□□□□ -0.65
DDB1-202ENST00000414411 SMIM10L2AP0DMW4 78 aa10.98□□□□□ -0.65
DDB1-202ENST00000414411 SMIM10L2BP0DMW5 78 aa10.98□□□□□ -0.65
DDB1-202ENST00000414411 CD44P16070 742 aaKnown RBP10.98□□□□□ -0.65
DDB1-202ENST00000414411 CYP11B2P19099 503 aa10.98□□□□□ -0.65
DDB1-202ENST00000414411 HIC1Q14526 733 aa10.98□□□□□ -0.65
DDB1-202ENST00000414411 PTPN21Q16825 1174 aa10.98□□□□□ -0.65
DDB1-202ENST00000414411 MTERF2Q49AM1 385 aa10.98□□□□□ -0.65
DDB1-202ENST00000414411 SPATA1Q5VX52 437 aa10.98□□□□□ -0.65
DDB1-202ENST00000414411 SPECC1LQ69YQ0 1117 aa10.98□□□□□ -0.65
DDB1-202ENST00000414411 SESTD1Q86VW0 696 aa10.98□□□□□ -0.65
DDB1-202ENST00000414411 SLC43A3Q8NBI5 491 aa10.98□□□□□ -0.65
DDB1-202ENST00000414411 KIF18AQ8NI77 898 aa10.98□□□□□ -0.65
DDB1-202ENST00000414411 C7orf25Q9BPX7 421 aa10.98□□□□□ -0.65
DDB1-202ENST00000414411 RUSC1Q9BVN2 902 aa10.98□□□□□ -0.65
DDB1-202ENST00000414411 KCND2Q9NZV8 630 aa10.98□□□□□ -0.65
DDB1-202ENST00000414411 HDAC6Q9UBN7 1215 aa10.98□□□□□ -0.65
DDB1-202ENST00000414411 TRPC6Q9Y210 931 aa10.98□□□□□ -0.65
DDB1-202ENST00000414411 NRCAMQ92823 1304 aa10.98□□□□□ -0.65
DDB1-202ENST00000414411 COL1A2P08123 1366 aa10.98□□□□□ -0.65
DDB1-202ENST00000414411 A0A1B0GTH6 734 aa10.97□□□□□ -0.65
DDB1-202ENST00000414411 MBLAC1A4D2B0 266 aaPredicted RBP10.97□□□□□ -0.65
DDB1-202ENST00000414411 ARHGEF35A5YM69 484 aa10.97□□□□□ -0.65
DDB1-202ENST00000414411 MYMKA6NI61 221 aa10.97□□□□□ -0.65
DDB1-202ENST00000414411 KBTBD13C9JR72 458 aa10.97□□□□□ -0.65
DDB1-202ENST00000414411 CCP110O43303 1012 aa10.97□□□□□ -0.65
DDB1-202ENST00000414411 MAFO75444 373 aaPredicted RBP10.97□□□□□ -0.65
DDB1-202ENST00000414411 DGAT1O75907 488 aa10.97□□□□□ -0.65
DDB1-202ENST00000414411 MYL1P05976 194 aa10.97□□□□□ -0.65
DDB1-202ENST00000414411 COL6A1P12109 1028 aa10.97□□□□□ -0.65
DDB1-202ENST00000414411 GUCY2CP25092 1073 aa10.97□□□□□ -0.65
DDB1-202ENST00000414411 NCBP1Q09161 790 aaKnown RBP10.97□□□□□ -0.65
DDB1-202ENST00000414411 PPFIA1Q13136 1202 aa10.97□□□□□ -0.65
DDB1-202ENST00000414411 ITGA7Q13683 1181 aa10.97□□□□□ -0.65
DDB1-202ENST00000414411 GRIK4Q16099 956 aa10.97□□□□□ -0.65
DDB1-202ENST00000414411 COL13A1Q5TAT6 717 aaPredicted RBP10.97□□□□□ -0.65
DDB1-202ENST00000414411 NFRKBQ6P4R8 1299 aa10.97□□□□□ -0.65
DDB1-202ENST00000414411 APTXQ7Z2E3 356 aaKnown RBP10.97□□□□□ -0.65
DDB1-202ENST00000414411 GPBP1Q86WP2 473 aa10.97□□□□□ -0.65
DDB1-202ENST00000414411 TMEM139Q8IV31 216 aa10.97□□□□□ -0.65
DDB1-202ENST00000414411 ANKLE1Q8NAG6 615 aa10.97□□□□□ -0.65
DDB1-202ENST00000414411 PPP1R13LQ8WUF5 828 aa10.97□□□□□ -0.65
DDB1-202ENST00000414411 LMBR1Q8WVP7 490 aa10.97□□□□□ -0.65
DDB1-202ENST00000414411 TRAPPC12Q8WVT3 735 aa10.97□□□□□ -0.65
DDB1-202ENST00000414411 DNAJC19Q96DA6 116 aa10.97□□□□□ -0.65
DDB1-202ENST00000414411 GLT1D1Q96MS3 346 aa10.97□□□□□ -0.65
DDB1-202ENST00000414411 TMEM106CQ9BVX2 250 aa10.97□□□□□ -0.65
DDB1-202ENST00000414411 TRIM9Q9C026 710 aa10.97□□□□□ -0.65
DDB1-202ENST00000414411 XPNPEP1Q9NQW7 623 aa10.97□□□□□ -0.65
DDB1-202ENST00000414411 SETD4Q9NVD3 440 aa10.97□□□□□ -0.65
DDB1-202ENST00000414411 RRN3P2A6NIE6 340 aa10.97□□□□□ -0.65
DDB1-202ENST00000414411 PPP1R3GB7ZBB8 358 aa10.97□□□□□ -0.65
DDB1-202ENST00000414411 PPP1R37O75864 691 aa10.97□□□□□ -0.65
DDB1-202ENST00000414411 C22orf31O95567 290 aa10.97□□□□□ -0.65
DDB1-202ENST00000414411 SSBP05455 408 aaKnown RBP eCLIP10.97□□□□□ -0.65
DDB1-202ENST00000414411 RFC5P40937 340 aa10.97□□□□□ -0.65
DDB1-202ENST00000414411 AMPD3Q01432 767 aa10.97□□□□□ -0.65
DDB1-202ENST00000414411 CDKAL1Q5VV42 579 aa10.97□□□□□ -0.65
DDB1-202ENST00000414411 KLHL10Q6JEL2 608 aa10.97□□□□□ -0.65
DDB1-202ENST00000414411 C7orf31Q8N865 590 aa10.97□□□□□ -0.65
DDB1-202ENST00000414411 DDX12PQ92771 950 aa10.97□□□□□ -0.65
DDB1-202ENST00000414411 LRRC27Q9C0I9 530 aa10.97□□□□□ -0.65
DDB1-202ENST00000414411 GTF2IRD1Q9UHL9 959 aa10.97□□□□□ -0.65
DDB1-202ENST00000414411 ARHGAP6O43182 974 aa10.96□□□□□ -0.65
DDB1-202ENST00000414411 TUBB4AP04350 444 aa10.96□□□□□ -0.65
DDB1-202ENST00000414411 KLRC1P26715 233 aa10.96□□□□□ -0.65
DDB1-202ENST00000414411 CDK7P50613 346 aa10.96□□□□□ -0.65
DDB1-202ENST00000414411 GOLGA8FQ08AF8 430 aa10.96□□□□□ -0.65
DDB1-202ENST00000414411 GOLGA8DPQ0D2H9 430 aa10.96□□□□□ -0.65
DDB1-202ENST00000414411 GIT2Q14161 759 aa10.96□□□□□ -0.65
DDB1-202ENST00000414411 NR1I3Q14994 352 aa10.96□□□□□ -0.65
DDB1-202ENST00000414411 MTHFD1LQ6UB35 978 aa10.96□□□□□ -0.65
DDB1-202ENST00000414411 EXOC8Q8IYI6 725 aa10.96□□□□□ -0.65
DDB1-202ENST00000414411 SMYD4Q8IYR2 804 aaPredicted RBP10.96□□□□□ -0.65
DDB1-202ENST00000414411 DAW1Q8N136 415 aa10.96□□□□□ -0.65
DDB1-202ENST00000414411 LINC01465Q8N7H1 131 aa10.96□□□□□ -0.65
DDB1-202ENST00000414411 CTAGE1Q96RT6 745 aa10.96□□□□□ -0.65
DDB1-202ENST00000414411 BLZF1Q9H2G9 400 aa10.96□□□□□ -0.65
DDB1-202ENST00000414411 STARD7Q9NQZ5 370 aa10.96□□□□□ -0.65
DDB1-202ENST00000414411 NPHP3-ACAD11A0A0J9YXS1 232 aa10.96□□□□□ -0.66
DDB1-202ENST00000414411 MAGEB2O15479 319 aa10.96□□□□□ -0.66
DDB1-202ENST00000414411 KLRC4O43908 158 aa10.96□□□□□ -0.66
DDB1-202ENST00000414411 USO1O60763 962 aaKnown RBP10.96□□□□□ -0.66
DDB1-202ENST00000414411 STX17P56962 302 aa10.96□□□□□ -0.66
DDB1-202ENST00000414411 CHMP4BP1P59074 171 aa10.96□□□□□ -0.66
DDB1-202ENST00000414411 IGBP1P78318 339 aa10.96□□□□□ -0.66
DDB1-202ENST00000414411 PTPN11Q06124 597 aaPredicted RBP10.96□□□□□ -0.66
DDB1-202ENST00000414411 TBC1D8BQ0IIM8 1120 aa10.96□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms