RNA–Protein interactions for RNA: ENST00000414407.1

LINC00398-201, long intergenic non-protein coding RNA 398, humanhuman

TSL 2 BASIC

Gene LINC00398, Length 906 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00398-201ENST00000414407 CUEDC2Q9H467 287 aa18.27■□□□□ 0.52
LINC00398-201ENST00000414407 C17orf75Q9HAS0 396 aa18.27■□□□□ 0.52
LINC00398-201ENST00000414407 IFT122Q9HBG6 1241 aa18.27■□□□□ 0.52
LINC00398-201ENST00000414407 ERVK-5Q9HDB9 667 aa18.27■□□□□ 0.52
LINC00398-201ENST00000414407 TET1Q8NFU7 2136 aa18.26■□□□□ 0.51
LINC00398-201ENST00000414407 SSBP05455 408 aaKnown RBP eCLIP18.26■□□□□ 0.51
LINC00398-201ENST00000414407 CMA1P23946 247 aa18.26■□□□□ 0.51
LINC00398-201ENST00000414407 PHKA2P46019 1235 aa18.26■□□□□ 0.51
LINC00398-201ENST00000414407 CAPSQ13938 189 aa18.26■□□□□ 0.51
LINC00398-201ENST00000414407 PPP2R5AQ15172 486 aa18.26■□□□□ 0.51
LINC00398-201ENST00000414407 TCTN1Q2MV58 587 aa18.26■□□□□ 0.51
LINC00398-201ENST00000414407 LRIT3Q3SXY7 679 aa18.26■□□□□ 0.51
LINC00398-201ENST00000414407 NAALADL2Q58DX5 795 aa18.26■□□□□ 0.51
LINC00398-201ENST00000414407 MAEAQ7L5Y9 396 aa18.26■□□□□ 0.51
LINC00398-201ENST00000414407 FAM228AQ86W67 206 aa18.26■□□□□ 0.51
LINC00398-201ENST00000414407 ASAP3Q8TDY4 903 aa18.26■□□□□ 0.51
LINC00398-201ENST00000414407 GPRC5CQ9NQ84 441 aa18.26■□□□□ 0.51
LINC00398-201ENST00000414407 CXXC1Q9P0U4 656 aaPredicted RBP18.26■□□□□ 0.51
LINC00398-201ENST00000414407 KCNG1Q9UIX4 513 aa18.26■□□□□ 0.51
LINC00398-201ENST00000414407 ST3GAL5Q9UNP4 418 aa18.26■□□□□ 0.51
LINC00398-201ENST00000414407 RANBP2P49792 3224 aaKnown RBP18.25■□□□□ 0.51
LINC00398-201ENST00000414407 A0A087X0B3 334 aa18.25■□□□□ 0.51
LINC00398-201ENST00000414407 A0A1W2PQ27 194 aa18.25■□□□□ 0.51
LINC00398-201ENST00000414407 A0A1W2PQ64 194 aa18.25■□□□□ 0.51
LINC00398-201ENST00000414407 A0A1W2PQD8 194 aa18.25■□□□□ 0.51
LINC00398-201ENST00000414407 SRGAP2CP0DJJ0 459 aa18.25■□□□□ 0.51
LINC00398-201ENST00000414407 SFPQP23246 707 aaKnown RBP eCLIP18.25■□□□□ 0.51
LINC00398-201ENST00000414407 STAT6P42226 847 aa18.25■□□□□ 0.51
LINC00398-201ENST00000414407 NAMPTP43490 491 aa18.25■□□□□ 0.51
LINC00398-201ENST00000414407 PTENP60484 403 aa18.25■□□□□ 0.51
LINC00398-201ENST00000414407 NFX1Q12986 1120 aaKnown RBP18.25■□□□□ 0.51
LINC00398-201ENST00000414407 MCM6Q14566 821 aa18.25■□□□□ 0.51
LINC00398-201ENST00000414407 IQUBQ8NA54 791 aa18.25■□□□□ 0.51
LINC00398-201ENST00000414407 PHOSPHO2Q8TCD6 241 aa18.25■□□□□ 0.51
LINC00398-201ENST00000414407 ZNF668Q96K58 619 aaPredicted RBP18.25■□□□□ 0.51
LINC00398-201ENST00000414407 IFT74Q96LB3 600 aa18.25■□□□□ 0.51
LINC00398-201ENST00000414407 ODF2LQ9ULJ1 636 aa18.25■□□□□ 0.51
LINC00398-201ENST00000414407 SLC4A7Q9Y6M7 1214 aa18.25■□□□□ 0.51
LINC00398-201ENST00000414407 FAM237AA0A1B0GTK4 181 aa18.24■□□□□ 0.51
LINC00398-201ENST00000414407 ZBBXA8MT70 800 aa18.24■□□□□ 0.51
LINC00398-201ENST00000414407 HIP1RO75146 1068 aa18.24■□□□□ 0.51
LINC00398-201ENST00000414407 KCNJ6P48051 423 aa18.24■□□□□ 0.51
LINC00398-201ENST00000414407 WDR5P61964 334 aaKnown RBP18.24■□□□□ 0.51
LINC00398-201ENST00000414407 MAPK7Q13164 816 aa18.24■□□□□ 0.51
LINC00398-201ENST00000414407 E2F4Q16254 413 aa18.24■□□□□ 0.51
LINC00398-201ENST00000414407 ARSHQ5FYA8 562 aa18.24■□□□□ 0.51
LINC00398-201ENST00000414407 SV2BQ7L1I2 683 aa18.24■□□□□ 0.51
LINC00398-201ENST00000414407 GPBP1Q86WP2 473 aa18.24■□□□□ 0.51
LINC00398-201ENST00000414407 SLC9A7Q96T83 725 aa18.24■□□□□ 0.51
LINC00398-201ENST00000414407 PANK2Q9BZ23 570 aa18.24■□□□□ 0.51
LINC00398-201ENST00000414407 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.23■□□□□ 0.51
LINC00398-201ENST00000414407 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.23■□□□□ 0.51
LINC00398-201ENST00000414407 ENPP3O14638 875 aa18.23■□□□□ 0.51
LINC00398-201ENST00000414407 CDCA2Q69YH5 1023 aaPredicted RBP18.23■□□□□ 0.51
LINC00398-201ENST00000414407 DAW1Q8N136 415 aa18.23■□□□□ 0.51
LINC00398-201ENST00000414407 PDILTQ8N807 584 aa18.23■□□□□ 0.51
LINC00398-201ENST00000414407 LRRC27Q9C0I9 530 aa18.23■□□□□ 0.51
LINC00398-201ENST00000414407 C2orf40Q9H1Z8 148 aa18.23■□□□□ 0.51
LINC00398-201ENST00000414407 TSPYL2Q9H2G4 693 aaPredicted RBP18.23■□□□□ 0.51
LINC00398-201ENST00000414407 TMX1Q9H3N1 280 aa18.23■□□□□ 0.51
LINC00398-201ENST00000414407 MAGEF1Q9HAY2 307 aa18.23■□□□□ 0.51
LINC00398-201ENST00000414407 CHST12Q9NRB3 414 aa18.23■□□□□ 0.51
LINC00398-201ENST00000414407 KCNH3Q9ULD8 1083 aa18.23■□□□□ 0.51
LINC00398-201ENST00000414407 TCHHQ07283 1943 aa18.22■□□□□ 0.51
LINC00398-201ENST00000414407 LOC101059915A0A1B0GWI6 518 aaPredicted RBP18.22■□□□□ 0.51
LINC00398-201ENST00000414407 LRRIQ4A6NIV6 560 aa18.22■□□□□ 0.51
LINC00398-201ENST00000414407 AMHP03971 560 aa18.22■□□□□ 0.51
LINC00398-201ENST00000414407 DHX8Q14562 1220 aaKnown RBP18.22■□□□□ 0.51
LINC00398-201ENST00000414407 CSPP1Q1MSJ5 1256 aa18.22■□□□□ 0.51
LINC00398-201ENST00000414407 HABP4Q5JVS0 413 aaKnown RBP18.22■□□□□ 0.51
LINC00398-201ENST00000414407 ZBTB8OSQ8IWT0 167 aa18.22■□□□□ 0.51
LINC00398-201ENST00000414407 BSNDQ8WZ55 320 aa18.22■□□□□ 0.51
LINC00398-201ENST00000414407 NTPCRQ9BSD7 190 aaKnown RBP18.22■□□□□ 0.51
LINC00398-201ENST00000414407 TNMDQ9H2S6 317 aa18.22■□□□□ 0.51
LINC00398-201ENST00000414407 MINDY3Q9H8M7 445 aa18.22■□□□□ 0.51
LINC00398-201ENST00000414407 GDPD2Q9HCC8 539 aa18.22■□□□□ 0.51
LINC00398-201ENST00000414407 RGS18Q9NS28 235 aa18.22■□□□□ 0.51
LINC00398-201ENST00000414407 C1orf112Q9NSG2 853 aa18.22■□□□□ 0.51
LINC00398-201ENST00000414407 KBTBD4Q9NVX7 518 aa18.22■□□□□ 0.51
LINC00398-201ENST00000414407 HPSEQ9Y251 543 aa18.22■□□□□ 0.51
LINC00398-201ENST00000414407 PHLPP2Q6ZVD8 1323 aa18.22■□□□□ 0.51
LINC00398-201ENST00000414407 POLR2DO15514 142 aaKnown RBP18.21■□□□□ 0.51
LINC00398-201ENST00000414407 CSDE1O75534 798 aaKnown RBP18.21■□□□□ 0.51
LINC00398-201ENST00000414407 PLS3P13797 630 aa18.21■□□□□ 0.51
LINC00398-201ENST00000414407 ATP2A2P16615 1042 aaKnown RBP18.21■□□□□ 0.51
LINC00398-201ENST00000414407 AXLP30530 894 aa18.21■□□□□ 0.51
LINC00398-201ENST00000414407 ZNF131P52739 623 aa18.21■□□□□ 0.51
LINC00398-201ENST00000414407 EFNA5P52803 228 aa18.21■□□□□ 0.51
LINC00398-201ENST00000414407 SMAD3P84022 425 aaKnown RBP18.21■□□□□ 0.51
LINC00398-201ENST00000414407 MBTD1Q05BQ5 628 aa18.21■□□□□ 0.51
LINC00398-201ENST00000414407 DMP1Q13316 513 aaPredicted RBP18.21■□□□□ 0.51
LINC00398-201ENST00000414407 GIT2Q14161 759 aa18.21■□□□□ 0.51
LINC00398-201ENST00000414407 DSC3Q14574 896 aa18.21■□□□□ 0.51
LINC00398-201ENST00000414407 CATSPER4Q7RTX7 472 aa18.21■□□□□ 0.51
LINC00398-201ENST00000414407 RTN4RL1Q86UN2 441 aaPredicted RBP18.21■□□□□ 0.51
LINC00398-201ENST00000414407 DEPTORQ8TB45 409 aa18.21■□□□□ 0.51
LINC00398-201ENST00000414407 SPIRE2Q8WWL2 714 aa18.21■□□□□ 0.51
LINC00398-201ENST00000414407 DHX58Q96C10 678 aa18.21■□□□□ 0.51
LINC00398-201ENST00000414407 PRIMPOLQ96LW4 560 aa18.21■□□□□ 0.51
LINC00398-201ENST00000414407 REEP2Q9BRK0 252 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms