RNA–Protein interactions for RNA: ENST00000413642.7

VEGFA-207, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,197 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-207ENST00000413642 EXOC8Q8IYI6 725 aa29.35■■■□□ 2.29
VEGFA-207ENST00000413642 KLHL23Q8NBE8 558 aa29.35■■■□□ 2.29
VEGFA-207ENST00000413642 MTRQ99707 1265 aa29.35■■■□□ 2.29
VEGFA-207ENST00000413642 MINDY3Q9H8M7 445 aa29.35■■■□□ 2.29
VEGFA-207ENST00000413642 TYW1Q9NV66 732 aaKnown RBP29.35■■■□□ 2.29
VEGFA-207ENST00000413642 ITGB1P05556 798 aa29.34■■■□□ 2.29
VEGFA-207ENST00000413642 SFPQP23246 707 aaKnown RBP eCLIP29.34■■■□□ 2.29
VEGFA-207ENST00000413642 DNAJB1P25685 340 aa29.34■■■□□ 2.29
VEGFA-207ENST00000413642 RARRES1P49788 294 aa29.34■■■□□ 2.29
VEGFA-207ENST00000413642 ORC2Q13416 577 aaPredicted RBP29.34■■■□□ 2.29
VEGFA-207ENST00000413642 CAMK1Q14012 370 aa29.34■■■□□ 2.29
VEGFA-207ENST00000413642 MCTP1Q6DN14 999 aa29.34■■■□□ 2.29
VEGFA-207ENST00000413642 CATSPER4Q7RTX7 472 aa29.34■■■□□ 2.29
VEGFA-207ENST00000413642 FERMT3Q86UX7 667 aa29.34■■■□□ 2.29
VEGFA-207ENST00000413642 CASD1Q96PB1 797 aa29.34■■■□□ 2.29
VEGFA-207ENST00000413642 PLVAPQ9BX97 442 aa29.34■■■□□ 2.29
VEGFA-207ENST00000413642 INO80BQ9C086 356 aaPredicted RBP29.34■■■□□ 2.29
VEGFA-207ENST00000413642 COG5Q9UP83 839 aa29.34■■■□□ 2.29
VEGFA-207ENST00000413642 A0A0C4DFX4 3053 aa29.33■■■□□ 2.29
VEGFA-207ENST00000413642 A0A0U1RQF3 1178 aa29.33■■■□□ 2.29
VEGFA-207ENST00000413642 ATF7P17544 494 aaPredicted RBP29.33■■■□□ 2.29
VEGFA-207ENST00000413642 MCM2P49736 904 aa29.33■■■□□ 2.29
VEGFA-207ENST00000413642 SPOUT1Q5T280 376 aaKnown RBP29.33■■■□□ 2.29
VEGFA-207ENST00000413642 LRRC55Q6ZSA7 311 aa29.33■■■□□ 2.29
VEGFA-207ENST00000413642 ZNF598Q86UK7 904 aaKnown RBP29.33■■■□□ 2.29
VEGFA-207ENST00000413642 TCP11Q8WWU5 503 aa29.33■■■□□ 2.29
VEGFA-207ENST00000413642 BACH2Q9BYV9 841 aa29.33■■■□□ 2.29
VEGFA-207ENST00000413642 RNF216Q9NWF9 866 aaPredicted RBP29.33■■■□□ 2.29
VEGFA-207ENST00000413642 PIN4Q9Y237 131 aaKnown RBP29.33■■■□□ 2.29
VEGFA-207ENST00000413642 LONRF3Q496Y0 759 aa29.32■■■□□ 2.28
VEGFA-207ENST00000413642 TIGD5Q53EQ6 642 aa29.32■■■□□ 2.28
VEGFA-207ENST00000413642 CLLU1OSQ5K130 101 aa29.32■■■□□ 2.28
VEGFA-207ENST00000413642 RNF149Q8NC42 400 aa29.32■■■□□ 2.28
VEGFA-207ENST00000413642 IL27Q8NEV9 243 aa29.32■■■□□ 2.28
VEGFA-207ENST00000413642 SPPL3Q8TCT6 385 aa29.32■■■□□ 2.28
VEGFA-207ENST00000413642 ASAP3Q8TDY4 903 aa29.32■■■□□ 2.28
VEGFA-207ENST00000413642 TMEM117Q9H0C3 514 aa29.32■■■□□ 2.28
VEGFA-207ENST00000413642 CWH43Q9H720 699 aa29.32■■■□□ 2.28
VEGFA-207ENST00000413642 TUFT1Q9NNX1 390 aa29.32■■■□□ 2.28
VEGFA-207ENST00000413642 CHST12Q9NRB3 414 aa29.32■■■□□ 2.28
VEGFA-207ENST00000413642 KIF3AQ9Y496 699 aa29.32■■■□□ 2.28
VEGFA-207ENST00000413642 BMP1P13497 986 aa29.31■■■□□ 2.28
VEGFA-207ENST00000413642 PTGDRQ13258 359 aa29.31■■■□□ 2.28
VEGFA-207ENST00000413642 POTEGQ6S5H5 508 aa29.31■■■□□ 2.28
VEGFA-207ENST00000413642 SYMPKQ92797 1274 aaKnown RBP29.31■■■□□ 2.28
VEGFA-207ENST00000413642 P2RX5Q93086 422 aa29.31■■■□□ 2.28
VEGFA-207ENST00000413642 CCDC43Q96MW1 224 aaKnown RBP29.31■■■□□ 2.28
VEGFA-207ENST00000413642 POLR3CQ9BUI4 534 aaPredicted RBP29.31■■■□□ 2.28
VEGFA-207ENST00000413642 LMAN2LQ9H0V9 348 aa29.31■■■□□ 2.28
VEGFA-207ENST00000413642 NSUN3Q9H649 340 aaKnown RBP29.31■■■□□ 2.28
VEGFA-207ENST00000413642 DACT1Q9NYF0 836 aa29.31■■■□□ 2.28
VEGFA-207ENST00000413642 NLRC5Q86WI3 1866 aa29.3■■■□□ 2.28
VEGFA-207ENST00000413642 GAS2O43903 313 aaKnown RBP29.3■■■□□ 2.28
VEGFA-207ENST00000413642 USO1O60763 962 aaKnown RBP29.3■■■□□ 2.28
VEGFA-207ENST00000413642 DGAT1O75907 488 aa29.3■■■□□ 2.28
VEGFA-207ENST00000413642 TWF2Q6IBS0 349 aaKnown RBP29.3■■■□□ 2.28
VEGFA-207ENST00000413642 MAEAQ7L5Y9 396 aa29.3■■■□□ 2.28
VEGFA-207ENST00000413642 SRGAP1Q7Z6B7 1085 aa29.3■■■□□ 2.28
VEGFA-207ENST00000413642 HELQQ8TDG4 1101 aa29.3■■■□□ 2.28
VEGFA-207ENST00000413642 ADAMTS19Q8TE59 1207 aa29.3■■■□□ 2.28
VEGFA-207ENST00000413642 LPPQ93052 612 aa29.3■■■□□ 2.28
VEGFA-207ENST00000413642 UBE2ZQ9H832 354 aaPredicted RBP29.3■■■□□ 2.28
VEGFA-207ENST00000413642 SMC3Q9UQE7 1217 aa29.3■■■□□ 2.28
VEGFA-207ENST00000413642 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP29.29■■■□□ 2.28
VEGFA-207ENST00000413642 XRCC6P12956 609 aaKnown RBP eCLIP29.29■■■□□ 2.281e-10■□□□□ 8.4
VEGFA-207ENST00000413642 IRS1P35568 1242 aa29.29■■■□□ 2.28
VEGFA-207ENST00000413642 ARL2P36404 184 aa29.29■■■□□ 2.28
VEGFA-207ENST00000413642 PHKA2P46019 1235 aa29.29■■■□□ 2.28
VEGFA-207ENST00000413642 ECM1Q16610 540 aa29.29■■■□□ 2.28
VEGFA-207ENST00000413642 COLGALT1Q8NBJ5 622 aa29.29■■■□□ 2.28
VEGFA-207ENST00000413642 NECAB3Q96P71 396 aaPredicted RBP29.29■■■□□ 2.28
VEGFA-207ENST00000413642 GPRC5CQ9NQ84 441 aa29.29■■■□□ 2.28
VEGFA-207ENST00000413642 RALGAPA2Q2PPJ7 1873 aa29.29■■■□□ 2.28
VEGFA-207ENST00000413642 REV3LO60673 3130 aa29.28■■■□□ 2.28
VEGFA-207ENST00000413642 MEIS3P2A8K0S8 358 aa29.28■■■□□ 2.28
VEGFA-207ENST00000413642 ASAP2O43150 1006 aa29.28■■■□□ 2.28
VEGFA-207ENST00000413642 FXR2P51116 673 aaKnown RBP eCLIP29.28■■■□□ 2.286e-18■■■□□ 18.2
VEGFA-207ENST00000413642 IL17AQ16552 155 aa29.28■■■□□ 2.28
VEGFA-207ENST00000413642 AAK1Q2M2I8 961 aa29.28■■■□□ 2.28
VEGFA-207ENST00000413642 ERMNQ8TAM6 284 aa29.28■■■□□ 2.28
VEGFA-207ENST00000413642 POF1BQ8WVV4 589 aa29.28■■■□□ 2.28
VEGFA-207ENST00000413642 AGPAT5Q9NUQ2 364 aa29.28■■■□□ 2.28
VEGFA-207ENST00000413642 PCDHGC5Q9Y5F6 944 aa29.28■■■□□ 2.28
VEGFA-207ENST00000413642 H3BQV1 296 aa29.27■■■□□ 2.28
VEGFA-207ENST00000413642 HOXA2O43364 376 aa29.27■■■□□ 2.28
VEGFA-207ENST00000413642 EOMESO95936 686 aa29.27■■■□□ 2.28
VEGFA-207ENST00000413642 KCNA5P22460 613 aa29.27■■■□□ 2.28
VEGFA-207ENST00000413642 GLRA2P23416 452 aa29.27■■■□□ 2.28
VEGFA-207ENST00000413642 RPA1P27694 616 aa29.27■■■□□ 2.28
VEGFA-207ENST00000413642 HOXA11P31270 313 aaPredicted RBP29.27■■■□□ 2.28
VEGFA-207ENST00000413642 PBX3P40426 434 aa29.27■■■□□ 2.28
VEGFA-207ENST00000413642 CAPSQ13938 189 aa29.27■■■□□ 2.28
VEGFA-207ENST00000413642 NAALADL2Q58DX5 795 aa29.27■■■□□ 2.28
VEGFA-207ENST00000413642 ABI1Q8IZP0 508 aa29.27■■■□□ 2.28
VEGFA-207ENST00000413642 NACC1Q96RE7 527 aa29.27■■■□□ 2.28
VEGFA-207ENST00000413642 TRAIPQ9BWF2 469 aa29.27■■■□□ 2.28
VEGFA-207ENST00000413642 POLR3FQ9H1D9 316 aaPredicted RBP29.27■■■□□ 2.28
VEGFA-207ENST00000413642 EIF4ENIF1Q9NRA8 985 aaKnown RBP29.27■■■□□ 2.28
VEGFA-207ENST00000413642 FAM105AQ9NUU6 356 aa29.27■■■□□ 2.28
VEGFA-207ENST00000413642 LRWD1Q9UFC0 647 aa29.27■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms