RNA–Protein interactions for RNA: ENST00000413374.1

NCKIPSD-202, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 725 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-202ENST00000413374 NECAB3Q96P71 396 aaPredicted RBP11.35□□□□□ -0.59
NCKIPSD-202ENST00000413374 CASD1Q96PB1 797 aa11.35□□□□□ -0.59
NCKIPSD-202ENST00000413374 C11orf84Q9BUA3 381 aaPredicted RBP11.35□□□□□ -0.59
NCKIPSD-202ENST00000413374 INO80BQ9C086 356 aaPredicted RBP11.35□□□□□ -0.59
NCKIPSD-202ENST00000413374 ELAC1Q9H777 363 aaKnown RBP11.35□□□□□ -0.59
NCKIPSD-202ENST00000413374 MINDY3Q9H8M7 445 aa11.35□□□□□ -0.59
NCKIPSD-202ENST00000413374 IFT122Q9HBG6 1241 aa11.35□□□□□ -0.59
NCKIPSD-202ENST00000413374 POLD4Q9HCU8 107 aa11.35□□□□□ -0.59
NCKIPSD-202ENST00000413374 XPNPEP1Q9NQW7 623 aa11.35□□□□□ -0.59
NCKIPSD-202ENST00000413374 RNF19AQ9NV58 838 aa11.35□□□□□ -0.59
NCKIPSD-202ENST00000413374 SMC3Q9UQE7 1217 aa11.35□□□□□ -0.59
NCKIPSD-202ENST00000413374 RWDD3Q9Y3V2 267 aa11.35□□□□□ -0.59
NCKIPSD-202ENST00000413374 A0A0U1RQF3 1178 aa11.34□□□□□ -0.59
NCKIPSD-202ENST00000413374 USO1O60763 962 aaKnown RBP11.34□□□□□ -0.59
NCKIPSD-202ENST00000413374 LYPLA2O95372 231 aa11.34□□□□□ -0.59
NCKIPSD-202ENST00000413374 BMP1P13497 986 aa11.34□□□□□ -0.59
NCKIPSD-202ENST00000413374 KCNA5P22460 613 aa11.34□□□□□ -0.59
NCKIPSD-202ENST00000413374 U2AF2P26368 475 aaKnown RBP eCLIP11.34□□□□□ -0.59
NCKIPSD-202ENST00000413374 GTF2F1P35269 517 aaKnown RBP eCLIP11.34□□□□□ -0.592e-6■■■■□ 23.4
NCKIPSD-202ENST00000413374 IRS1P35568 1242 aa11.34□□□□□ -0.59
NCKIPSD-202ENST00000413374 PBX3P40426 434 aa11.34□□□□□ -0.59
NCKIPSD-202ENST00000413374 RARRES1P49788 294 aa11.34□□□□□ -0.59
NCKIPSD-202ENST00000413374 PTGDRQ13258 359 aa11.34□□□□□ -0.59
NCKIPSD-202ENST00000413374 CAMK1Q14012 370 aa11.34□□□□□ -0.59
NCKIPSD-202ENST00000413374 POTEGQ6S5H5 508 aa11.34□□□□□ -0.59
NCKIPSD-202ENST00000413374 RBM23Q86U06 439 aaKnown RBP11.34□□□□□ -0.59
NCKIPSD-202ENST00000413374 EXOC8Q8IYI6 725 aa11.34□□□□□ -0.59
NCKIPSD-202ENST00000413374 ABI1Q8IZP0 508 aa11.34□□□□□ -0.59
NCKIPSD-202ENST00000413374 NEK9Q8TD19 979 aa11.34□□□□□ -0.59
NCKIPSD-202ENST00000413374 ASAP3Q8TDY4 903 aa11.34□□□□□ -0.59
NCKIPSD-202ENST00000413374 MICAL1Q8TDZ2 1067 aa11.34□□□□□ -0.59
NCKIPSD-202ENST00000413374 ADAMTS19Q8TE59 1207 aa11.34□□□□□ -0.59
NCKIPSD-202ENST00000413374 TCP11Q8WWU5 503 aa11.34□□□□□ -0.59
NCKIPSD-202ENST00000413374 PLVAPQ9BX97 442 aa11.34□□□□□ -0.59
NCKIPSD-202ENST00000413374 NSUN3Q9H649 340 aaKnown RBP11.34□□□□□ -0.59
NCKIPSD-202ENST00000413374 CWH43Q9H720 699 aa11.34□□□□□ -0.59
NCKIPSD-202ENST00000413374 GPRC5CQ9NQ84 441 aa11.34□□□□□ -0.59
NCKIPSD-202ENST00000413374 ANKEF1Q9NU02 776 aa11.34□□□□□ -0.59
NCKIPSD-202ENST00000413374 RNF216Q9NWF9 866 aaPredicted RBP11.34□□□□□ -0.59
NCKIPSD-202ENST00000413374 COG5Q9UP83 839 aa11.34□□□□□ -0.59
NCKIPSD-202ENST00000413374 PCDHB12Q9Y5F1 795 aa11.34□□□□□ -0.59
NCKIPSD-202ENST00000413374 PCDHGC5Q9Y5F6 944 aa11.34□□□□□ -0.59
NCKIPSD-202ENST00000413374 UNC80Q8N2C7 3258 aa11.34□□□□□ -0.59
NCKIPSD-202ENST00000413374 PRUNE2Q8WUY3 3088 aa11.34□□□□□ -0.59
NCKIPSD-202ENST00000413374 MEIS3P2A8K0S8 358 aa11.33□□□□□ -0.6
NCKIPSD-202ENST00000413374 NT5C1B-RDH14C9J2C7 533 aa11.33□□□□□ -0.6
NCKIPSD-202ENST00000413374 H3BQ06 376 aaPredicted RBP11.33□□□□□ -0.6
NCKIPSD-202ENST00000413374 ASAP2O43150 1006 aa11.33□□□□□ -0.6
NCKIPSD-202ENST00000413374 ATF7P17544 494 aaPredicted RBP11.33□□□□□ -0.6
NCKIPSD-202ENST00000413374 CDC25AP30304 524 aa11.33□□□□□ -0.6
NCKIPSD-202ENST00000413374 CCT6AP40227 531 aaKnown RBP11.33□□□□□ -0.6
NCKIPSD-202ENST00000413374 PHKA2P46019 1235 aa11.33□□□□□ -0.6
NCKIPSD-202ENST00000413374 MCM2P49736 904 aa11.33□□□□□ -0.6
NCKIPSD-202ENST00000413374 ECM1Q16610 540 aa11.33□□□□□ -0.6
NCKIPSD-202ENST00000413374 AAK1Q2M2I8 961 aa11.33□□□□□ -0.6
NCKIPSD-202ENST00000413374 CLLU1OSQ5K130 101 aa11.33□□□□□ -0.6
NCKIPSD-202ENST00000413374 SRGAP1Q7Z6B7 1085 aa11.33□□□□□ -0.6
NCKIPSD-202ENST00000413374 THNSL1Q8IYQ7 743 aa11.33□□□□□ -0.6
NCKIPSD-202ENST00000413374 COLGALT1Q8NBJ5 622 aa11.33□□□□□ -0.6
NCKIPSD-202ENST00000413374 ERMNQ8TAM6 284 aa11.33□□□□□ -0.6
NCKIPSD-202ENST00000413374 CPB2Q96IY4 423 aa11.33□□□□□ -0.6
NCKIPSD-202ENST00000413374 BACH2Q9BYV9 841 aa11.33□□□□□ -0.6
NCKIPSD-202ENST00000413374 TMEM117Q9H0C3 514 aa11.33□□□□□ -0.6
NCKIPSD-202ENST00000413374 UBE2ZQ9H832 354 aaPredicted RBP11.33□□□□□ -0.6
NCKIPSD-202ENST00000413374 TUFT1Q9NNX1 390 aa11.33□□□□□ -0.6
NCKIPSD-202ENST00000413374 CHST12Q9NRB3 414 aa11.33□□□□□ -0.6
NCKIPSD-202ENST00000413374 AAASQ9NRG9 546 aa11.33□□□□□ -0.6
NCKIPSD-202ENST00000413374 FOXD4L1Q9NU39 408 aa11.33□□□□□ -0.6
NCKIPSD-202ENST00000413374 CLDND1Q9NY35 253 aa11.33□□□□□ -0.6
NCKIPSD-202ENST00000413374 DACT1Q9NYF0 836 aa11.33□□□□□ -0.6
NCKIPSD-202ENST00000413374 LRWD1Q9UFC0 647 aa11.33□□□□□ -0.6
NCKIPSD-202ENST00000413374 INPP5FQ9Y2H2 1132 aa11.33□□□□□ -0.6
NCKIPSD-202ENST00000413374 KIF3AQ9Y496 699 aa11.33□□□□□ -0.6
NCKIPSD-202ENST00000413374 PPME1Q9Y570 386 aa11.33□□□□□ -0.6
NCKIPSD-202ENST00000413374 MICAL3Q7RTP6 2002 aa11.33□□□□□ -0.6
NCKIPSD-202ENST00000413374 SIP14410 1827 aa11.32□□□□□ -0.6
NCKIPSD-202ENST00000413374 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.32□□□□□ -0.6
NCKIPSD-202ENST00000413374 PP2D1A8MPX8 630 aa11.32□□□□□ -0.6
NCKIPSD-202ENST00000413374 INO80B-WBP1J3KQ70 363 aa11.32□□□□□ -0.6
NCKIPSD-202ENST00000413374 DGAT1O75907 488 aa11.32□□□□□ -0.6
NCKIPSD-202ENST00000413374 FGF18O76093 207 aa11.32□□□□□ -0.6
NCKIPSD-202ENST00000413374 EOMESO95936 686 aa11.32□□□□□ -0.6
NCKIPSD-202ENST00000413374 ARL2P36404 184 aa11.32□□□□□ -0.6
NCKIPSD-202ENST00000413374 TRAPPC10P48553 1259 aa11.32□□□□□ -0.6
NCKIPSD-202ENST00000413374 HYAL1Q12794 435 aa11.32□□□□□ -0.6
NCKIPSD-202ENST00000413374 ZRSR1Q15695 479 aaKnown RBP11.32□□□□□ -0.6
NCKIPSD-202ENST00000413374 CLUL1Q15846 466 aa11.32□□□□□ -0.6
NCKIPSD-202ENST00000413374 IL17AQ16552 155 aa11.32□□□□□ -0.6
NCKIPSD-202ENST00000413374 TIGD5Q53EQ6 642 aa11.32□□□□□ -0.6
NCKIPSD-202ENST00000413374 LARP1BQ659C4 914 aaKnown RBP11.32□□□□□ -0.6
NCKIPSD-202ENST00000413374 ADGRD2Q7Z7M1 963 aa11.32□□□□□ -0.6
NCKIPSD-202ENST00000413374 ZNF598Q86UK7 904 aaKnown RBP11.32□□□□□ -0.6
NCKIPSD-202ENST00000413374 P2RX5Q93086 422 aa11.32□□□□□ -0.6
NCKIPSD-202ENST00000413374 NACC1Q96RE7 527 aa11.32□□□□□ -0.6
NCKIPSD-202ENST00000413374 UHRF1Q96T88 793 aaPredicted RBP11.32□□□□□ -0.6
NCKIPSD-202ENST00000413374 POLR3CQ9BUI4 534 aaPredicted RBP11.32□□□□□ -0.6
NCKIPSD-202ENST00000413374 LMAN2LQ9H0V9 348 aa11.32□□□□□ -0.6
NCKIPSD-202ENST00000413374 POLR3FQ9H1D9 316 aaPredicted RBP11.32□□□□□ -0.6
NCKIPSD-202ENST00000413374 FAM105AQ9NUU6 356 aa11.32□□□□□ -0.6
NCKIPSD-202ENST00000413374 KIAA1024Q9UPX6 916 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms