RNA–Protein interactions for RNA: ENST00000412393.5

LINC00342-201, long intergenic non-protein coding RNA 342, humanhuman

TSL 3 BASIC

Gene LINC00342, Length 654 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00342-201ENST00000412393 MBD4O95243 580 aa6.26□□□□□ -1.41
LINC00342-201ENST00000412393 GH2P01242 217 aa6.26□□□□□ -1.41
LINC00342-201ENST00000412393 EN2P19622 333 aaPredicted RBP6.26□□□□□ -1.41
LINC00342-201ENST00000412393 HOXA7P31268 230 aaPredicted RBP6.26□□□□□ -1.41
LINC00342-201ENST00000412393 GRK4P32298 578 aa6.26□□□□□ -1.41
LINC00342-201ENST00000412393 MCM4P33991 863 aa6.26□□□□□ -1.41
LINC00342-201ENST00000412393 SHMT1P34896 483 aa6.26□□□□□ -1.41
LINC00342-201ENST00000412393 DDIT3P35638 169 aa6.26□□□□□ -1.41
LINC00342-201ENST00000412393 IRX3P78415 501 aaPredicted RBP6.26□□□□□ -1.41
LINC00342-201ENST00000412393 PRKCZQ05513 592 aa6.26□□□□□ -1.41
LINC00342-201ENST00000412393 EGR3Q06889 387 aa6.26□□□□□ -1.41
LINC00342-201ENST00000412393 RAB3GAP1Q15042 981 aa6.26□□□□□ -1.41
LINC00342-201ENST00000412393 UBE3CQ15386 1083 aa6.26□□□□□ -1.41
LINC00342-201ENST00000412393 ABCB5Q2M3G0 1257 aa6.26□□□□□ -1.41
LINC00342-201ENST00000412393 CERKLQ49MI3 558 aaPredicted RBP6.26□□□□□ -1.41
LINC00342-201ENST00000412393 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.26□□□□□ -1.41
LINC00342-201ENST00000412393 ZSCAN25Q6NSZ9 544 aa6.26□□□□□ -1.41
LINC00342-201ENST00000412393 TATDN1Q6P1N9 297 aa6.26□□□□□ -1.41
LINC00342-201ENST00000412393 ANKRD13CQ8N6S4 541 aa6.26□□□□□ -1.41
LINC00342-201ENST00000412393 ANKS4BQ8N8V4 417 aa6.26□□□□□ -1.41
LINC00342-201ENST00000412393 DACT3Q96B18 629 aaPredicted RBP6.26□□□□□ -1.41
LINC00342-201ENST00000412393 PLPPR2Q96GM1 343 aa6.26□□□□□ -1.41
LINC00342-201ENST00000412393 GPATCH3Q96I76 525 aa6.26□□□□□ -1.41
LINC00342-201ENST00000412393 FEZ1Q99689 392 aa6.26□□□□□ -1.41
LINC00342-201ENST00000412393 ECHDC1Q9NTX5 307 aa6.26□□□□□ -1.41
LINC00342-201ENST00000412393 BIN2Q9UBW5 565 aaPredicted RBP6.26□□□□□ -1.41
LINC00342-201ENST00000412393 GABRQQ9UN88 632 aa6.26□□□□□ -1.41
LINC00342-201ENST00000412393 USTQ9Y2C2 406 aa6.26□□□□□ -1.41
LINC00342-201ENST00000412393 ZNFX1Q9P2E3 1918 aaKnown RBP6.26□□□□□ -1.41
LINC00342-201ENST00000412393 MYH4Q9Y623 1939 aa6.26□□□□□ -1.41
LINC00342-201ENST00000412393 HTTP42858 3142 aa6.26□□□□□ -1.41
LINC00342-201ENST00000412393 PARP14Q460N5 1801 aa6.25□□□□□ -1.41
LINC00342-201ENST00000412393 RLFQ13129 1914 aa6.25□□□□□ -1.41
LINC00342-201ENST00000412393 OR14I1A6ND48 311 aa6.25□□□□□ -1.41
LINC00342-201ENST00000412393 GOLGA6L3A6NEY3 463 aa6.25□□□□□ -1.41
LINC00342-201ENST00000412393 OTOL1A6NHN0 477 aaPredicted RBP6.25□□□□□ -1.41
LINC00342-201ENST00000412393 MPHOSPH10O00566 681 aaKnown RBP6.25□□□□□ -1.41
LINC00342-201ENST00000412393 PRKAB2O43741 272 aa6.25□□□□□ -1.41
LINC00342-201ENST00000412393 ADCY3O60266 1144 aa6.25□□□□□ -1.41
LINC00342-201ENST00000412393 CHGBP05060 677 aa6.25□□□□□ -1.41
LINC00342-201ENST00000412393 TPM2P07951 284 aa6.25□□□□□ -1.41
LINC00342-201ENST00000412393 CYP2D6P10635 497 aa6.25□□□□□ -1.41
LINC00342-201ENST00000412393 SERPINB4P48594 390 aa6.25□□□□□ -1.41
LINC00342-201ENST00000412393 FLT3LGP49771 235 aa6.25□□□□□ -1.41
LINC00342-201ENST00000412393 AFF3P51826 1226 aaKnown RBP6.25□□□□□ -1.41
LINC00342-201ENST00000412393 HERVK_113P62684 666 aa6.25□□□□□ -1.41
LINC00342-201ENST00000412393 UBXN2AP68543 259 aa6.25□□□□□ -1.41
LINC00342-201ENST00000412393 GABPAQ06546 454 aa6.25□□□□□ -1.41
LINC00342-201ENST00000412393 ZYXQ15942 572 aaKnown RBP6.25□□□□□ -1.41
LINC00342-201ENST00000412393 HS1BP3Q53T59 392 aa6.25□□□□□ -1.41
LINC00342-201ENST00000412393 TSPYL5Q86VY4 417 aaPredicted RBP6.25□□□□□ -1.41
LINC00342-201ENST00000412393 MRPL41Q8IXM3 137 aaKnown RBP6.25□□□□□ -1.41
LINC00342-201ENST00000412393 AMOTL1Q8IY63 956 aa6.25□□□□□ -1.41
LINC00342-201ENST00000412393 KBTBD3Q8NAB2 608 aa6.25□□□□□ -1.41
LINC00342-201ENST00000412393 COA7Q96BR5 231 aa6.25□□□□□ -1.41
LINC00342-201ENST00000412393 P2RX7Q99572 595 aaKnown RBP6.25□□□□□ -1.41
LINC00342-201ENST00000412393 ATP8A2Q9NTI2 1148 aa6.25□□□□□ -1.41
LINC00342-201ENST00000412393 CHMP5Q9NZZ3 219 aa6.25□□□□□ -1.41
LINC00342-201ENST00000412393 MORF4L1Q9UBU8 362 aa6.25□□□□□ -1.41
LINC00342-201ENST00000412393 CNOT11Q9UKZ1 510 aaKnown RBP6.25□□□□□ -1.41
LINC00342-201ENST00000412393 KCNH3Q9ULD8 1083 aa6.25□□□□□ -1.41
LINC00342-201ENST00000412393 CENPFP49454 3210 aa6.25□□□□□ -1.41
LINC00342-201ENST00000412393 COL11A1P12107 1806 aaPredicted RBP6.25□□□□□ -1.41
LINC00342-201ENST00000412393 CYP2D7A0A087X1C5 515 aa6.24□□□□□ -1.41
LINC00342-201ENST00000412393 ZC3H12DA2A288 527 aaKnown RBP6.24□□□□□ -1.41
LINC00342-201ENST00000412393 CCL5P13501 91 aa6.24□□□□□ -1.41
LINC00342-201ENST00000412393 GUCY1A2P33402 732 aa6.24□□□□□ -1.41
LINC00342-201ENST00000412393 USP14P54578 494 aa6.24□□□□□ -1.41
LINC00342-201ENST00000412393 EFEMP1Q12805 493 aa6.24□□□□□ -1.41
LINC00342-201ENST00000412393 SSPNQ14714 243 aa6.24□□□□□ -1.41
LINC00342-201ENST00000412393 SEPT2Q15019 361 aa6.24□□□□□ -1.41
LINC00342-201ENST00000412393 C12orf60Q5U649 245 aa6.24□□□□□ -1.41
LINC00342-201ENST00000412393 TSHZ3Q63HK5 1081 aa6.24□□□□□ -1.41
LINC00342-201ENST00000412393 PCNX4Q63HM2 1172 aa6.24□□□□□ -1.41
LINC00342-201ENST00000412393 OLFML2BQ68BL8 750 aa6.24□□□□□ -1.41
LINC00342-201ENST00000412393 CDH24Q86UP0 819 aa6.24□□□□□ -1.41
LINC00342-201ENST00000412393 SLC44A5Q8NCS7 719 aa6.24□□□□□ -1.41
LINC00342-201ENST00000412393 ACER1Q8TDN7 264 aa6.24□□□□□ -1.41
LINC00342-201ENST00000412393 FBF1Q8TES7 1133 aa6.24□□□□□ -1.41
LINC00342-201ENST00000412393 SNX21Q969T3 373 aa6.24□□□□□ -1.41
LINC00342-201ENST00000412393 DYNLL2Q96FJ2 89 aa6.24□□□□□ -1.41
LINC00342-201ENST00000412393 C12orf42Q96LP6 360 aa6.24□□□□□ -1.41
LINC00342-201ENST00000412393 PAGR1Q9BTK6 254 aa6.24□□□□□ -1.41
LINC00342-201ENST00000412393 KIAA1683Q9H0B3 1180 aa6.24□□□□□ -1.41
LINC00342-201ENST00000412393 PUS7LQ9H0K6 701 aaKnown RBP6.24□□□□□ -1.41
LINC00342-201ENST00000412393 PDCL3Q9H2J4 239 aa6.24□□□□□ -1.41
LINC00342-201ENST00000412393 SWAP70Q9UH65 585 aa6.24□□□□□ -1.41
LINC00342-201ENST00000412393 SLC4A4Q9Y6R1 1079 aa6.24□□□□□ -1.41
LINC00342-201ENST00000412393 GREB1LQ9C091 1923 aaPredicted RBP6.24□□□□□ -1.41
LINC00342-201ENST00000412393 TTC41PQ6P2S7 1318 aa6.24□□□□□ -1.41
LINC00342-201ENST00000412393 SLC22A31A6NKX4 558 aa6.23□□□□□ -1.41
LINC00342-201ENST00000412393 ERC2O15083 957 aa6.23□□□□□ -1.41
LINC00342-201ENST00000412393 RNF113AO15541 343 aaKnown RBP6.23□□□□□ -1.41
LINC00342-201ENST00000412393 IGHDP01880 384 aa6.23□□□□□ -1.41
LINC00342-201ENST00000412393 GJB1P08034 283 aa6.23□□□□□ -1.41
LINC00342-201ENST00000412393 ZFYP08048 801 aaPredicted RBP6.23□□□□□ -1.41
LINC00342-201ENST00000412393 VCAM1P19320 739 aa6.23□□□□□ -1.41
LINC00342-201ENST00000412393 CDK8P49336 464 aa6.23□□□□□ -1.41
LINC00342-201ENST00000412393 HSP90AA2PQ14568 343 aaPredicted RBP6.23□□□□□ -1.41
LINC00342-201ENST00000412393 LRRFIP1Q32MZ4 808 aaKnown RBP6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms