RNA–Protein interactions for RNA: ENST00000411827.1

CDC42-204, Transcript of cell division cycle 42, humanhuman

TSL 3

Gene CDC42, Length 597 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-204ENST00000411827 ZSCAN23Q3MJ62 389 aa20.6■□□□□ 0.89
CDC42-204ENST00000411827 ANO10Q9NW15 660 aa20.6■□□□□ 0.89
CDC42-204ENST00000411827 UBE4BO95155 1302 aa20.59■□□□□ 0.89
CDC42-204ENST00000411827 DCDC2CA8MYV0 355 aa20.59■□□□□ 0.89
CDC42-204ENST00000411827 EIF3DO15371 548 aaKnown RBP eCLIP20.59■□□□□ 0.89
CDC42-204ENST00000411827 LAMTOR4Q0VGL1 99 aa20.59■□□□□ 0.89
CDC42-204ENST00000411827 MAEAQ7L5Y9 396 aa20.59■□□□□ 0.89
CDC42-204ENST00000411827 IFNLR1Q8IU57 520 aaPredicted RBP20.59■□□□□ 0.89
CDC42-204ENST00000411827 ZBTB8OSQ8IWT0 167 aa20.59■□□□□ 0.89
CDC42-204ENST00000411827 LRRC71Q8N4P6 559 aa20.59■□□□□ 0.89
CDC42-204ENST00000411827 CAGE1Q8TC20 777 aa20.59■□□□□ 0.89
CDC42-204ENST00000411827 INO80BQ9C086 356 aaPredicted RBP20.59■□□□□ 0.89
CDC42-204ENST00000411827 MRPL44Q9H9J2 332 aaKnown RBP20.59■□□□□ 0.89
CDC42-204ENST00000411827 KMT5AQ9NQR1 393 aa20.59■□□□□ 0.89
CDC42-204ENST00000411827 MAN1B1Q9UKM7 699 aa20.59■□□□□ 0.89
CDC42-204ENST00000411827 AKT3Q9Y243 479 aa20.59■□□□□ 0.89
CDC42-204ENST00000411827 GLRA2P23416 452 aa20.58■□□□□ 0.89
CDC42-204ENST00000411827 CASP1P29466 404 aa20.58■□□□□ 0.89
CDC42-204ENST00000411827 PHKA2P46019 1235 aa20.58■□□□□ 0.89
CDC42-204ENST00000411827 NPTX2P47972 431 aa20.58■□□□□ 0.89
CDC42-204ENST00000411827 CLCN3P51790 818 aa20.58■□□□□ 0.89
CDC42-204ENST00000411827 PEX3P56589 373 aa20.58■□□□□ 0.89
CDC42-204ENST00000411827 NLRP12P59046 1061 aa20.58■□□□□ 0.89
CDC42-204ENST00000411827 RBL2Q08999 1139 aa20.58■□□□□ 0.89
CDC42-204ENST00000411827 MKRN4PQ13434 485 aaPredicted RBP20.58■□□□□ 0.89
CDC42-204ENST00000411827 ZNF720Q7Z2F6 126 aa20.58■□□□□ 0.89
CDC42-204ENST00000411827 SFR1Q86XK3 245 aa20.58■□□□□ 0.89
CDC42-204ENST00000411827 RHPN2Q8IUC4 686 aa20.58■□□□□ 0.89
CDC42-204ENST00000411827 DEPTORQ8TB45 409 aa20.58■□□□□ 0.89
CDC42-204ENST00000411827 PAWRQ96IZ0 340 aaKnown RBP20.58■□□□□ 0.89
CDC42-204ENST00000411827 GPRC5CQ9NQ84 441 aa20.58■□□□□ 0.89
CDC42-204ENST00000411827 CCDC169A6NNP5 214 aa20.57■□□□□ 0.88
CDC42-204ENST00000411827 RSPH10B2B2RC85 870 aa20.57■□□□□ 0.88
CDC42-204ENST00000411827 RSPH10BP0C881 870 aa20.57■□□□□ 0.88
CDC42-204ENST00000411827 NCKAP1LP55160 1127 aa20.57■□□□□ 0.88
CDC42-204ENST00000411827 BFSP2Q13515 415 aa20.57■□□□□ 0.88
CDC42-204ENST00000411827 STX1AQ16623 288 aa20.57■□□□□ 0.88
CDC42-204ENST00000411827 SRGAP1Q7Z6B7 1085 aa20.57■□□□□ 0.88
CDC42-204ENST00000411827 FAM126BQ8IXS8 530 aa20.57■□□□□ 0.88
CDC42-204ENST00000411827 GUF1Q8N442 669 aaKnown RBP20.57■□□□□ 0.88
CDC42-204ENST00000411827 NAT10Q9H0A0 1025 aaKnown RBP20.57■□□□□ 0.88
CDC42-204ENST00000411827 TMEM134Q9H6X4 195 aa20.57■□□□□ 0.88
CDC42-204ENST00000411827 EXOC7Q9UPT5 735 aa20.57■□□□□ 0.88
CDC42-204ENST00000411827 SQORQ9Y6N5 450 aa20.57■□□□□ 0.88
CDC42-204ENST00000411827 BRCA2P51587 3418 aa20.56■□□□□ 0.88
CDC42-204ENST00000411827 KIAA0100Q14667 2235 aaKnown RBP20.56■□□□□ 0.88
CDC42-204ENST00000411827 SFI1A8K8P3 1242 aa20.56■□□□□ 0.88
CDC42-204ENST00000411827 PARNO95453 639 aaKnown RBP20.56■□□□□ 0.88
CDC42-204ENST00000411827 CD4P01730 458 aa20.56■□□□□ 0.88
CDC42-204ENST00000411827 SNRPFP62306 86 aaKnown RBP20.56■□□□□ 0.88
CDC42-204ENST00000411827 GTF2BQ00403 316 aa20.56■□□□□ 0.88
CDC42-204ENST00000411827 CACNB1Q02641 598 aaPredicted RBP20.56■□□□□ 0.88
CDC42-204ENST00000411827 HIC1Q14526 733 aa20.56■□□□□ 0.88
CDC42-204ENST00000411827 CDCA2Q69YH5 1023 aaPredicted RBP20.56■□□□□ 0.88
CDC42-204ENST00000411827 FOXR2Q6PJQ5 311 aa20.56■□□□□ 0.88
CDC42-204ENST00000411827 HAUS6Q7Z4H7 955 aa20.56■□□□□ 0.88
CDC42-204ENST00000411827 USP38Q8NB14 1042 aa20.56■□□□□ 0.88
CDC42-204ENST00000411827 RNF149Q8NC42 400 aa20.56■□□□□ 0.88
CDC42-204ENST00000411827 ASAP3Q8TDY4 903 aa20.56■□□□□ 0.88
CDC42-204ENST00000411827 DNAJB3Q8WWF6 145 aa20.56■□□□□ 0.88
CDC42-204ENST00000411827 GCOM2Q9BZD3 368 aaPredicted RBP20.56■□□□□ 0.88
CDC42-204ENST00000411827 FAM49AQ9H0Q0 323 aaPredicted RBP20.56■□□□□ 0.88
CDC42-204ENST00000411827 TMEM206Q9H813 350 aa20.56■□□□□ 0.88
CDC42-204ENST00000411827 ARHGAP28Q9P2N2 729 aa20.56■□□□□ 0.88
CDC42-204ENST00000411827 MKI67P46013 3256 aaKnown RBP20.56■□□□□ 0.88
CDC42-204ENST00000411827 LRRIQ4A6NIV6 560 aa20.55■□□□□ 0.88
CDC42-204ENST00000411827 PITPNM1O00562 1244 aa20.55■□□□□ 0.88
CDC42-204ENST00000411827 PSMA7O14818 248 aa20.55■□□□□ 0.88
CDC42-204ENST00000411827 B4GALT4O60513 344 aa20.55■□□□□ 0.88
CDC42-204ENST00000411827 GPC3P51654 580 aa20.55■□□□□ 0.88
CDC42-204ENST00000411827 CRYBB1P53674 252 aaPredicted RBP20.55■□□□□ 0.88
CDC42-204ENST00000411827 ZNF445P59923 1031 aa20.55■□□□□ 0.88
CDC42-204ENST00000411827 PTENP60484 403 aa20.55■□□□□ 0.88
CDC42-204ENST00000411827 MRPS6P82932 125 aaKnown RBP20.55■□□□□ 0.88
CDC42-204ENST00000411827 ZNF200P98182 395 aaPredicted RBP20.55■□□□□ 0.88
CDC42-204ENST00000411827 MLLT1Q03111 559 aaPredicted RBP20.55■□□□□ 0.88
CDC42-204ENST00000411827 CAPSQ13938 189 aa20.55■□□□□ 0.88
CDC42-204ENST00000411827 HSP90AA2PQ14568 343 aaPredicted RBP20.55■□□□□ 0.88
CDC42-204ENST00000411827 BMT2Q1RMZ1 405 aa20.55■□□□□ 0.88
CDC42-204ENST00000411827 UBE2Q1Q7Z7E8 422 aa20.55■□□□□ 0.88
CDC42-204ENST00000411827 MYOCDQ8IZQ8 938 aa20.55■□□□□ 0.88
CDC42-204ENST00000411827 TMEM161BQ8NDZ6 487 aa20.55■□□□□ 0.88
CDC42-204ENST00000411827 DHTKD1Q96HY7 919 aaPredicted RBP20.55■□□□□ 0.88
CDC42-204ENST00000411827 SCLT1Q96NL6 688 aa20.55■□□□□ 0.88
CDC42-204ENST00000411827 CGNQ9P2M7 1197 aaKnown RBP20.55■□□□□ 0.88
CDC42-204ENST00000411827 SYCE3A1L190 88 aa20.54■□□□□ 0.88
CDC42-204ENST00000411827 K7ENM7 598 aa20.54■□□□□ 0.88
CDC42-204ENST00000411827 K7ERI5 159 aa20.54■□□□□ 0.88
CDC42-204ENST00000411827 GCNT3O95395 438 aa20.54■□□□□ 0.88
CDC42-204ENST00000411827 SRGAP2CP0DJJ0 459 aa20.54■□□□□ 0.88
CDC42-204ENST00000411827 SOX10P56693 466 aa20.54■□□□□ 0.88
CDC42-204ENST00000411827 NLRP11P59045 1033 aaKnown RBP20.54■□□□□ 0.88
CDC42-204ENST00000411827 TYRO3Q06418 890 aa20.54■□□□□ 0.88
CDC42-204ENST00000411827 NCBP1Q09161 790 aaKnown RBP20.54■□□□□ 0.88
CDC42-204ENST00000411827 STRN3Q13033 797 aa20.54■□□□□ 0.88
CDC42-204ENST00000411827 STK4Q13043 487 aa20.54■□□□□ 0.88
CDC42-204ENST00000411827 DRP2Q13474 957 aa20.54■□□□□ 0.88
CDC42-204ENST00000411827 MAPK6Q16659 721 aa20.54■□□□□ 0.88
CDC42-204ENST00000411827 FAM26DQ5JW98 314 aa20.54■□□□□ 0.88
CDC42-204ENST00000411827 RUFY4Q6ZNE9 571 aa20.54■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms