RNA–Protein interactions for RNA: ENST00000410080.5

PRPF40A-202, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PRPF40A, Length 8,048 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-202ENST00000410080 SLC7A5Q01650 507 aa11.97□□□□□ -0.49
PRPF40A-202ENST00000410080 GRIN1Q05586 938 aa11.97□□□□□ -0.49
PRPF40A-202ENST00000410080 BBS9Q3SYG4 887 aa11.97□□□□□ -0.49
PRPF40A-202ENST00000410080 ZNF302Q9NR11 478 aa11.97□□□□□ -0.49
PRPF40A-202ENST00000410080 CITO14578 2027 aa11.96□□□□□ -0.49
PRPF40A-202ENST00000410080 DCTN3O75935 186 aa11.96□□□□□ -0.49
PRPF40A-202ENST00000410080 BBOX1O75936 387 aa11.96□□□□□ -0.49
PRPF40A-202ENST00000410080 ZBTB17Q13105 803 aa11.96□□□□□ -0.49
PRPF40A-202ENST00000410080 ENTPD7Q9NQZ7 604 aa11.96□□□□□ -0.49
PRPF40A-202ENST00000410080 GEMIN8Q9NWZ8 242 aaKnown RBP11.96□□□□□ -0.49
PRPF40A-202ENST00000410080 CCDC159P0C7I6 412 aa11.96□□□□□ -0.49
PRPF40A-202ENST00000410080 COPS2P61201 443 aa11.96□□□□□ -0.49
PRPF40A-202ENST00000410080 TMEM62Q0P6H9 643 aa11.96□□□□□ -0.49
PRPF40A-202ENST00000410080 KRT72Q14CN4 511 aa11.96□□□□□ -0.49
PRPF40A-202ENST00000410080 BTBD8Q5XKL5 378 aa11.96□□□□□ -0.49
PRPF40A-202ENST00000410080 SIX5Q8N196 739 aa11.96□□□□□ -0.49
PRPF40A-202ENST00000410080 AP1M1Q9BXS5 423 aa11.96□□□□□ -0.49
PRPF40A-202ENST00000410080 LMBRD1Q9NUN5 540 aa11.96□□□□□ -0.49
PRPF40A-202ENST00000410080 COPB1P53618 953 aaKnown RBP11.96□□□□□ -0.49
PRPF40A-202ENST00000410080 IFT88Q13099 833 aa11.96□□□□□ -0.49
PRPF40A-202ENST00000410080 SNCBQ16143 134 aa11.96□□□□□ -0.49
PRPF40A-202ENST00000410080 PDXDC1Q6P996 788 aa11.96□□□□□ -0.49
PRPF40A-202ENST00000410080 ATP6V0A4Q9HBG4 840 aa11.96□□□□□ -0.49
PRPF40A-202ENST00000410080 TXLNGQ9NUQ3 528 aa11.96□□□□□ -0.49
PRPF40A-202ENST00000410080 PCDHA7Q9UN72 937 aa11.96□□□□□ -0.49
PRPF40A-202ENST00000410080 LAD1O00515 517 aa11.96□□□□□ -0.5
PRPF40A-202ENST00000410080 BHMTQ93088 406 aa11.96□□□□□ -0.5
PRPF40A-202ENST00000410080 TTC17Q96AE7 1141 aa11.96□□□□□ -0.5
PRPF40A-202ENST00000410080 CCDC51Q96ER9 411 aa11.96□□□□□ -0.5
PRPF40A-202ENST00000410080 ACAP3Q96P50 834 aa11.96□□□□□ -0.5
PRPF40A-202ENST00000410080 PACSIN2Q9UNF0 486 aaPredicted RBP11.96□□□□□ -0.5
PRPF40A-202ENST00000410080 CDC42BPGQ6DT37 1551 aa11.96□□□□□ -0.5
PRPF40A-202ENST00000410080 AARSP49588 968 aaKnown RBP eCLIP11.96□□□□□ -0.5
PRPF40A-202ENST00000410080 MXI1P50539 228 aa11.96□□□□□ -0.5
PRPF40A-202ENST00000410080 AGR3Q8TD06 166 aa11.96□□□□□ -0.5
PRPF40A-202ENST00000410080 KLHL29Q96CT2 875 aa11.96□□□□□ -0.5
PRPF40A-202ENST00000410080 FOPNLQ96NB1 174 aa11.96□□□□□ -0.5
PRPF40A-202ENST00000410080 DHX36Q9H2U1 1008 aaKnown RBP11.96□□□□□ -0.5
PRPF40A-202ENST00000410080 SH3BP1Q9Y3L3 701 aa11.96□□□□□ -0.5
PRPF40A-202ENST00000410080 EPN1Q9Y6I3 576 aaPredicted RBP11.96□□□□□ -0.5
PRPF40A-202ENST00000410080 UBE4BO95155 1302 aa11.96□□□□□ -0.5
PRPF40A-202ENST00000410080 MYH6P13533 1939 aa11.96□□□□□ -0.5
PRPF40A-202ENST00000410080 A0A087WWV3 80 aa11.96□□□□□ -0.5
PRPF40A-202ENST00000410080 TNPO2O14787 897 aaKnown RBP11.96□□□□□ -0.5
PRPF40A-202ENST00000410080 MAP3K13O43283 966 aa11.96□□□□□ -0.5
PRPF40A-202ENST00000410080 ECE2O60344 883 aa11.96□□□□□ -0.5
PRPF40A-202ENST00000410080 ZNF235Q14590 738 aa11.96□□□□□ -0.5
PRPF40A-202ENST00000410080 CENPUQ71F23 418 aa11.96□□□□□ -0.5
PRPF40A-202ENST00000410080 KIF12Q96FN5 646 aa11.96□□□□□ -0.5
PRPF40A-202ENST00000410080 SEPT5Q99719 369 aaPredicted RBP11.96□□□□□ -0.5
PRPF40A-202ENST00000410080 AGRPO00253 132 aa11.95□□□□□ -0.5
PRPF40A-202ENST00000410080 NCALDP61601 193 aa11.95□□□□□ -0.5
PRPF40A-202ENST00000410080 RAD51Q06609 339 aa11.95□□□□□ -0.5
PRPF40A-202ENST00000410080 UBE2Q2Q8WVN8 375 aa11.95□□□□□ -0.5
PRPF40A-202ENST00000410080 PUS7LQ9H0K6 701 aaKnown RBP11.95□□□□□ -0.5
PRPF40A-202ENST00000410080 RUBCNLQ9H714 662 aa11.95□□□□□ -0.5
PRPF40A-202ENST00000410080 DBNLQ9UJU6 430 aaKnown RBP11.95□□□□□ -0.5
PRPF40A-202ENST00000410080 CARMIL3Q8ND23 1372 aa11.95□□□□□ -0.5
PRPF40A-202ENST00000410080 SASH1O94885 1247 aa11.95□□□□□ -0.5
PRPF40A-202ENST00000410080 FTCDO95954 541 aa11.95□□□□□ -0.5
PRPF40A-202ENST00000410080 ASNSP08243 561 aa11.95□□□□□ -0.5
PRPF40A-202ENST00000410080 EPB42P16452 691 aa11.95□□□□□ -0.5
PRPF40A-202ENST00000410080 GRAMD1BQ3KR37 738 aa11.95□□□□□ -0.5
PRPF40A-202ENST00000410080 ADCK5Q3MIX3 580 aa11.95□□□□□ -0.5
PRPF40A-202ENST00000410080 SH3RF3Q8TEJ3 882 aaPredicted RBP11.95□□□□□ -0.5
PRPF40A-202ENST00000410080 ANKRD49Q8WVL7 239 aa11.95□□□□□ -0.5
PRPF40A-202ENST00000410080 ZSWIM6Q9HCJ5 1215 aa11.95□□□□□ -0.5
PRPF40A-202ENST00000410080 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.95□□□□□ -0.5
PRPF40A-202ENST00000410080 PCDHGB4Q9UN71 923 aa11.95□□□□□ -0.5
PRPF40A-202ENST00000410080 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.95□□□□□ -0.58e-8■■□□□ 12
PRPF40A-202ENST00000410080 KDM5DQ9BY66 1539 aa11.95□□□□□ -0.5
PRPF40A-202ENST00000410080 TBC1D12O60347 775 aa11.95□□□□□ -0.5
PRPF40A-202ENST00000410080 CTSHP09668 335 aa11.95□□□□□ -0.5
PRPF40A-202ENST00000410080 TCF3P15923 654 aa11.95□□□□□ -0.5
PRPF40A-202ENST00000410080 STX19Q8N4C7 294 aa11.95□□□□□ -0.5
PRPF40A-202ENST00000410080 MASTLQ96GX5 879 aa11.95□□□□□ -0.5
PRPF40A-202ENST00000410080 OSBPL10Q9BXB5 764 aa11.95□□□□□ -0.5
PRPF40A-202ENST00000410080 ADA2Q9NZK5 511 aa11.95□□□□□ -0.5
PRPF40A-202ENST00000410080 ALDH1A2O94788 518 aa11.95□□□□□ -0.5
PRPF40A-202ENST00000410080 PKP1Q13835 747 aa11.95□□□□□ -0.5
PRPF40A-202ENST00000410080 DMC1Q14565 340 aa11.95□□□□□ -0.5
PRPF40A-202ENST00000410080 PLEKHM3Q6ZWE6 761 aa11.95□□□□□ -0.5
PRPF40A-202ENST00000410080 FAM160B2Q86V87 743 aa11.95□□□□□ -0.5
PRPF40A-202ENST00000410080 MTBPQ96DY7 904 aa11.95□□□□□ -0.5
PRPF40A-202ENST00000410080 MYH7P12883 1935 aa11.95□□□□□ -0.5
PRPF40A-202ENST00000410080 TLR2O60603 784 aa11.95□□□□□ -0.5
PRPF40A-202ENST00000410080 IL6STP40189 918 aaPredicted RBP11.95□□□□□ -0.5
PRPF40A-202ENST00000410080 MORF4L2Q15014 288 aa11.95□□□□□ -0.5
PRPF40A-202ENST00000410080 HSP90AA5PQ58FG0 334 aa11.95□□□□□ -0.5
PRPF40A-202ENST00000410080 ACAD11Q709F0 780 aa11.95□□□□□ -0.5
PRPF40A-202ENST00000410080 SLC13A1Q9BZW2 595 aa11.95□□□□□ -0.5
PRPF40A-202ENST00000410080 ABCC12Q96J65 1359 aa11.95□□□□□ -0.5
PRPF40A-202ENST00000410080 C16orf87Q6PH81 154 aa11.95□□□□□ -0.5
PRPF40A-202ENST00000410080 SYNE4Q8N205 404 aa11.95□□□□□ -0.5
PRPF40A-202ENST00000410080 SSH3Q8TE77 659 aa11.95□□□□□ -0.5
PRPF40A-202ENST00000410080 FAM213AQ9BRX8 229 aa11.95□□□□□ -0.5
PRPF40A-202ENST00000410080 KIFC3Q9BVG8 833 aa11.95□□□□□ -0.5
PRPF40A-202ENST00000410080 ZCCHC11Q5TAX3 1644 aaKnown RBP11.94□□□□□ -0.5
PRPF40A-202ENST00000410080 LUC7L3O95232 432 aaKnown RBP11.94□□□□□ -0.5
PRPF40A-202ENST00000410080 CDC25AP30304 524 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 123.6 ms