RNA–Protein interactions for RNA: ENST00000410054.5

R3HDM1-204, Transcript of R3H domain containing 1, humanhuman

TSL 2 BASIC

Gene R3HDM1, Length 4,442 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-204ENST00000410054 CYP4F8P98187 520 aa5.58□□□□□ -1.52
R3HDM1-204ENST00000410054 TAF1CQ15572 869 aaPredicted RBP5.58□□□□□ -1.52
R3HDM1-204ENST00000410054 ZNF852Q6ZMS4 543 aa5.58□□□□□ -1.52
R3HDM1-204ENST00000410054 PDZD4Q76G19 769 aaPredicted RBP5.58□□□□□ -1.52
R3HDM1-204ENST00000410054 FAM71BQ8TC56 605 aa5.58□□□□□ -1.52
R3HDM1-204ENST00000410054 EPS8L3Q8TE67 593 aaKnown RBP5.58□□□□□ -1.52
R3HDM1-204ENST00000410054 PRCCQ92733 491 aaPredicted RBP5.58□□□□□ -1.52
R3HDM1-204ENST00000410054 USP13Q92995 863 aaPredicted RBP5.58□□□□□ -1.52
R3HDM1-204ENST00000410054 RELTQ969Z4 430 aa5.58□□□□□ -1.52
R3HDM1-204ENST00000410054 ZFYVE19Q96K21 471 aa5.58□□□□□ -1.52
R3HDM1-204ENST00000410054 RPRD1AQ96P16 312 aaPredicted RBP5.58□□□□□ -1.52
R3HDM1-204ENST00000410054 FAM213AQ9BRX8 229 aa5.58□□□□□ -1.52
R3HDM1-204ENST00000410054 C8orf33Q9H7E9 229 aaPredicted RBP5.58□□□□□ -1.52
R3HDM1-204ENST00000410054 SNRKQ9NRH2 765 aa5.58□□□□□ -1.52
R3HDM1-204ENST00000410054 SERPINB13Q9UIV8 391 aa5.58□□□□□ -1.52
R3HDM1-204ENST00000410054 RUSC2Q8N2Y8 1516 aa5.58□□□□□ -1.52
R3HDM1-204ENST00000410054 SMCO2A6NFE2 343 aa5.58□□□□□ -1.52
R3HDM1-204ENST00000410054 PSMD9O00233 223 aa5.58□□□□□ -1.52
R3HDM1-204ENST00000410054 RASGRF2O14827 1237 aa5.58□□□□□ -1.52
R3HDM1-204ENST00000410054 TNFRSF21O75509 655 aa5.58□□□□□ -1.52
R3HDM1-204ENST00000410054 MICAL2O94851 1124 aa5.58□□□□□ -1.52
R3HDM1-204ENST00000410054 HEXIM1O94992 359 aaKnown RBP5.58□□□□□ -1.52
R3HDM1-204ENST00000410054 NTRK1P04629 796 aa5.58□□□□□ -1.52
R3HDM1-204ENST00000410054 GSTA2P09210 222 aa5.58□□□□□ -1.52
R3HDM1-204ENST00000410054 TKTP29401 623 aaKnown RBP5.58□□□□□ -1.52
R3HDM1-204ENST00000410054 NOS2P35228 1153 aa5.58□□□□□ -1.52
R3HDM1-204ENST00000410054 ASMTP46597 345 aa5.58□□□□□ -1.52
R3HDM1-204ENST00000410054 SSTP61278 116 aa5.58□□□□□ -1.52
R3HDM1-204ENST00000410054 TBX2Q13207 712 aaPredicted RBP5.58□□□□□ -1.52
R3HDM1-204ENST00000410054 NR1D2Q14995 579 aa5.58□□□□□ -1.52
R3HDM1-204ENST00000410054 SPA17Q15506 151 aa5.58□□□□□ -1.52
R3HDM1-204ENST00000410054 IFI16Q16666 785 aaKnown RBP5.58□□□□□ -1.52
R3HDM1-204ENST00000410054 KRT24Q2M2I5 525 aa5.58□□□□□ -1.52
R3HDM1-204ENST00000410054 Q3ZCU0 254 aa5.58□□□□□ -1.52
R3HDM1-204ENST00000410054 TTMPQ5BVD1 217 aa5.58□□□□□ -1.52
R3HDM1-204ENST00000410054 BEND4Q6ZU67 534 aa5.58□□□□□ -1.52
R3HDM1-204ENST00000410054 IFNL2Q8IZJ0 200 aa5.58□□□□□ -1.52
R3HDM1-204ENST00000410054 TCP11L2Q8N4U5 519 aa5.58□□□□□ -1.52
R3HDM1-204ENST00000410054 ATP6V1C2Q8NEY4 427 aa5.58□□□□□ -1.52
R3HDM1-204ENST00000410054 SYTL5Q8TDW5 730 aaPredicted RBP5.58□□□□□ -1.52
R3HDM1-204ENST00000410054 CIDECQ96AQ7 238 aaPredicted RBP5.58□□□□□ -1.52
R3HDM1-204ENST00000410054 KIAA1143Q96AT1 154 aaPredicted RBP5.58□□□□□ -1.52
R3HDM1-204ENST00000410054 RBM17Q96I25 401 aaKnown RBP5.58□□□□□ -1.52
R3HDM1-204ENST00000410054 ANKRD27Q96NW4 1050 aa5.58□□□□□ -1.52
R3HDM1-204ENST00000410054 CEP44Q9C0F1 390 aa5.58□□□□□ -1.52
R3HDM1-204ENST00000410054 GLT8D2Q9H1C3 349 aa5.58□□□□□ -1.52
R3HDM1-204ENST00000410054 NEK6Q9HC98 313 aa5.58□□□□□ -1.52
R3HDM1-204ENST00000410054 CYP4F12Q9HCS2 524 aa5.58□□□□□ -1.52
R3HDM1-204ENST00000410054 ATAD3AQ9NVI7 634 aa5.58□□□□□ -1.52
R3HDM1-204ENST00000410054 EHD3Q9NZN3 535 aa5.58□□□□□ -1.52
R3HDM1-204ENST00000410054 ZKSCAN7Q9P0L1 754 aaPredicted RBP5.58□□□□□ -1.52
R3HDM1-204ENST00000410054 MYO1AQ9UBC5 1043 aa5.58□□□□□ -1.52
R3HDM1-204ENST00000410054 C15orf38-AP3S2A0A0A6YYH1 394 aa5.58□□□□□ -1.52
R3HDM1-204ENST00000410054 STX16-NPEPL1H3BU86 382 aa5.58□□□□□ -1.52
R3HDM1-204ENST00000410054 TRDMT1O14717 391 aaKnown RBP5.58□□□□□ -1.52
R3HDM1-204ENST00000410054 FPGTO14772 594 aa5.58□□□□□ -1.52
R3HDM1-204ENST00000410054 CDC40O60508 579 aaKnown RBP eCLIP5.58□□□□□ -1.52
R3HDM1-204ENST00000410054 UFL1O94874 794 aa5.58□□□□□ -1.52
R3HDM1-204ENST00000410054 FYNP06241 537 aa5.58□□□□□ -1.52
R3HDM1-204ENST00000410054 ATP5BP06576 529 aaKnown RBP5.58□□□□□ -1.52
R3HDM1-204ENST00000410054 ENO2P09104 434 aaPredicted RBP5.58□□□□□ -1.52
R3HDM1-204ENST00000410054 HLA-DPA1P20036 260 aa5.58□□□□□ -1.52
R3HDM1-204ENST00000410054 IGSF11Q5DX21 431 aa5.58□□□□□ -1.52
R3HDM1-204ENST00000410054 CLVS2Q5SYC1 327 aa5.58□□□□□ -1.52
R3HDM1-204ENST00000410054 C6orf183Q5T699 404 aa5.58□□□□□ -1.52
R3HDM1-204ENST00000410054 C16orf86Q6ZW13 317 aa5.58□□□□□ -1.52
R3HDM1-204ENST00000410054 USP48Q86UV5 1035 aa5.58□□□□□ -1.52
R3HDM1-204ENST00000410054 SLC7A5P1Q8MH63 180 aa5.58□□□□□ -1.52
R3HDM1-204ENST00000410054 SYT2Q8N9I0 419 aaPredicted RBP5.58□□□□□ -1.52
R3HDM1-204ENST00000410054 CAPSLQ8WWF8 208 aa5.58□□□□□ -1.52
R3HDM1-204ENST00000410054 COG3Q96JB2 828 aa5.58□□□□□ -1.52
R3HDM1-204ENST00000410054 PPP1R13BQ96KQ4 1090 aa5.58□□□□□ -1.52
R3HDM1-204ENST00000410054 RMDN3Q96TC7 470 aa5.58□□□□□ -1.52
R3HDM1-204ENST00000410054 CAB39LQ9H9S4 337 aa5.58□□□□□ -1.52
R3HDM1-204ENST00000410054 PCDH18Q9HCL0 1135 aa5.58□□□□□ -1.52
R3HDM1-204ENST00000410054 GMIPQ9P107 970 aa5.58□□□□□ -1.52
R3HDM1-204ENST00000410054 VPS4AQ9UN37 437 aa5.58□□□□□ -1.52
R3HDM1-204ENST00000410054 GPC6Q9Y625 555 aaPredicted RBP5.58□□□□□ -1.52
R3HDM1-204ENST00000410054 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP5.58□□□□□ -1.52
R3HDM1-204ENST00000410054 RAB19A4D1S5 217 aa5.58□□□□□ -1.52
R3HDM1-204ENST00000410054 SRRM3A6NNA2 597 aaPredicted RBP5.58□□□□□ -1.52
R3HDM1-204ENST00000410054 NDUFS8O00217 210 aa5.58□□□□□ -1.52
R3HDM1-204ENST00000410054 EIF3FO00303 357 aaPredicted RBP5.58□□□□□ -1.52
R3HDM1-204ENST00000410054 RGS10O43665 173 aa5.58□□□□□ -1.52
R3HDM1-204ENST00000410054 PEX1O43933 1283 aa5.58□□□□□ -1.52
R3HDM1-204ENST00000410054 NR1I2O75469 434 aa5.58□□□□□ -1.52
R3HDM1-204ENST00000410054 PNPP00491 289 aa5.58□□□□□ -1.52
R3HDM1-204ENST00000410054 MSH2P43246 934 aa5.58□□□□□ -1.52
R3HDM1-204ENST00000410054 BCAP31P51572 246 aa5.58□□□□□ -1.52
R3HDM1-204ENST00000410054 ATXN1P54253 815 aaKnown RBP5.58□□□□□ -1.52
R3HDM1-204ENST00000410054 GSTO1P78417 241 aa5.58□□□□□ -1.52
R3HDM1-204ENST00000410054 ZNF45Q02386 682 aa5.58□□□□□ -1.52
R3HDM1-204ENST00000410054 ZC2HC1CQ53FD0 456 aaPredicted RBP5.58□□□□□ -1.52
R3HDM1-204ENST00000410054 USP39Q53GS9 565 aaKnown RBP5.58□□□□□ -1.52
R3HDM1-204ENST00000410054 ETFRF1Q6IPR1 90 aa5.58□□□□□ -1.52
R3HDM1-204ENST00000410054 CFAP161Q6P656 301 aa5.58□□□□□ -1.52
R3HDM1-204ENST00000410054 ATG14Q6ZNE5 492 aa5.58□□□□□ -1.52
R3HDM1-204ENST00000410054 PLEKHM3Q6ZWE6 761 aa5.58□□□□□ -1.52
R3HDM1-204ENST00000410054 TAS2R42Q7RTR8 314 aa5.58□□□□□ -1.52
R3HDM1-204ENST00000410054 PATL1Q86TB9 770 aaKnown RBP5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms