RNA–Protein interactions for RNA: ENST00000409808.6

LIMS2-207, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene LIMS2, Length 2,315 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-207ENST00000409808 RUFY1Q96T51 708 aa21.58■■□□□ 1.05
LIMS2-207ENST00000409808 GDF3Q9NR23 364 aa21.58■■□□□ 1.05
LIMS2-207ENST00000409808 TBC1D7Q9P0N9 293 aa21.58■■□□□ 1.05
LIMS2-207ENST00000409808 CETN3O15182 167 aa21.58■■□□□ 1.04
LIMS2-207ENST00000409808 NCK2O43639 380 aa21.58■■□□□ 1.04
LIMS2-207ENST00000409808 ATP9AO75110 1047 aa21.58■■□□□ 1.04
LIMS2-207ENST00000409808 NR3C2P08235 984 aa21.58■■□□□ 1.04
LIMS2-207ENST00000409808 DNAJC21Q5F1R6 531 aaKnown RBP21.58■■□□□ 1.04
LIMS2-207ENST00000409808 HERC4Q5GLZ8 1057 aaPredicted RBP21.58■■□□□ 1.04
LIMS2-207ENST00000409808 B3GNT9Q6UX72 402 aa21.58■■□□□ 1.04
LIMS2-207ENST00000409808 BHMT2Q9H2M3 363 aa21.58■■□□□ 1.04
LIMS2-207ENST00000409808 RBM12Q9NTZ6 932 aaKnown RBP21.58■■□□□ 1.04
LIMS2-207ENST00000409808 BZW2Q9Y6E2 419 aaKnown RBP21.58■■□□□ 1.04
LIMS2-207ENST00000409808 LCTP09848 1927 aa21.58■■□□□ 1.04
LIMS2-207ENST00000409808 BUB1O43683 1085 aa21.57■■□□□ 1.04
LIMS2-207ENST00000409808 MEI1Q5TIA1 1274 aa21.57■■□□□ 1.04
LIMS2-207ENST00000409808 FOXR1Q6PIV2 292 aa21.57■■□□□ 1.04
LIMS2-207ENST00000409808 NIPA1Q7RTP0 329 aa21.57■■□□□ 1.04
LIMS2-207ENST00000409808 C10orf67Q8IYJ2 551 aa21.57■■□□□ 1.04
LIMS2-207ENST00000409808 BANK1Q8NDB2 785 aa21.57■■□□□ 1.04
LIMS2-207ENST00000409808 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP21.57■■□□□ 1.048e-7■■■■■ 58.5
LIMS2-207ENST00000409808 RIT2Q99578 217 aa21.57■■□□□ 1.04
LIMS2-207ENST00000409808 FGFBP2Q9BYJ0 223 aa21.57■■□□□ 1.04
LIMS2-207ENST00000409808 MAGEA9P43362 315 aa21.57■■□□□ 1.04
LIMS2-207ENST00000409808 SLC7A5Q01650 507 aa21.57■■□□□ 1.04
LIMS2-207ENST00000409808 KLHL30Q0D2K2 578 aa21.57■■□□□ 1.04
LIMS2-207ENST00000409808 MKRN3Q13064 507 aaKnown RBP21.57■■□□□ 1.04
LIMS2-207ENST00000409808 PAK2Q13177 524 aa21.57■■□□□ 1.04
LIMS2-207ENST00000409808 ADAM9Q13443 819 aa21.57■■□□□ 1.04
LIMS2-207ENST00000409808 ASIC2Q16515 512 aa21.57■■□□□ 1.04
LIMS2-207ENST00000409808 SYT2Q8N9I0 419 aaPredicted RBP21.57■■□□□ 1.04
LIMS2-207ENST00000409808 SCFD1Q8WVM8 642 aa21.57■■□□□ 1.04
LIMS2-207ENST00000409808 SLC10A4Q96EP9 437 aa21.57■■□□□ 1.04
LIMS2-207ENST00000409808 AGTPBP1Q9UPW5 1226 aa21.57■■□□□ 1.04
LIMS2-207ENST00000409808 KIAA1217Q5T5P2 1943 aa21.56■■□□□ 1.04
LIMS2-207ENST00000409808 A0A0G2JMZ2 1700 aa21.56■■□□□ 1.04
LIMS2-207ENST00000409808 PALMO75781 387 aa21.56■■□□□ 1.04
LIMS2-207ENST00000409808 KRT18P05783 430 aaKnown RBP21.56■■□□□ 1.04
LIMS2-207ENST00000409808 ANXA13P27216 316 aa21.56■■□□□ 1.04
LIMS2-207ENST00000409808 CNTN2Q02246 1040 aa21.56■■□□□ 1.04
LIMS2-207ENST00000409808 FRMD5Q7Z6J6 570 aa21.56■■□□□ 1.04
LIMS2-207ENST00000409808 VSIG10LQ86VR7 867 aa21.56■■□□□ 1.04
LIMS2-207ENST00000409808 ZHX3Q9H4I2 956 aa21.56■■□□□ 1.04
LIMS2-207ENST00000409808 BCAS3Q9H6U6 928 aa21.56■■□□□ 1.04
LIMS2-207ENST00000409808 PLCB1Q9NQ66 1216 aa21.56■■□□□ 1.04
LIMS2-207ENST00000409808 IRAK1P51617 712 aa21.56■■□□□ 1.04
LIMS2-207ENST00000409808 CORO7P57737 925 aa21.56■■□□□ 1.04
LIMS2-207ENST00000409808 IFI16Q16666 785 aaKnown RBP21.56■■□□□ 1.04
LIMS2-207ENST00000409808 MREGQ8N565 214 aa21.56■■□□□ 1.04
LIMS2-207ENST00000409808 EIF1ADQ8N9N8 165 aaKnown RBP21.56■■□□□ 1.04
LIMS2-207ENST00000409808 NSUN6Q8TEA1 469 aaKnown RBP21.56■■□□□ 1.04
LIMS2-207ENST00000409808 PSMB7Q99436 277 aa21.56■■□□□ 1.04
LIMS2-207ENST00000409808 CAPS2Q9BXY5 557 aa21.56■■□□□ 1.04
LIMS2-207ENST00000409808 SPATC1LQ9H0A9 340 aa21.56■■□□□ 1.04
LIMS2-207ENST00000409808 GANQ9H2C0 597 aa21.56■■□□□ 1.04
LIMS2-207ENST00000409808 TUFT1Q9NNX1 390 aa21.56■■□□□ 1.04
LIMS2-207ENST00000409808 ATP8B3O60423 1300 aa21.56■■□□□ 1.04
LIMS2-207ENST00000409808 CNMDO75829 334 aa21.55■■□□□ 1.04
LIMS2-207ENST00000409808 CCND2P30279 289 aa21.55■■□□□ 1.04
LIMS2-207ENST00000409808 SKOR1P84550 965 aa21.55■■□□□ 1.04
LIMS2-207ENST00000409808 FSTL1Q12841 308 aa21.55■■□□□ 1.04
LIMS2-207ENST00000409808 GPAT2Q6NUI2 795 aa21.55■■□□□ 1.04
LIMS2-207ENST00000409808 NCAPG2Q86XI2 1143 aa21.55■■□□□ 1.04
LIMS2-207ENST00000409808 ANKRD35Q8N283 1001 aa21.55■■□□□ 1.04
LIMS2-207ENST00000409808 RUSC1Q9BVN2 902 aa21.55■■□□□ 1.04
LIMS2-207ENST00000409808 TXNRD2Q9NNW7 524 aa21.55■■□□□ 1.04
LIMS2-207ENST00000409808 RAPGEF1Q13905 1077 aa21.55■■□□□ 1.04
LIMS2-207ENST00000409808 GIT2Q14161 759 aa21.55■■□□□ 1.04
LIMS2-207ENST00000409808 EPHA7Q15375 998 aa21.55■■□□□ 1.04
LIMS2-207ENST00000409808 MIER3Q7Z3K6 550 aa21.55■■□□□ 1.04
LIMS2-207ENST00000409808 TRAF3IP3Q9Y228 551 aa21.55■■□□□ 1.04
LIMS2-207ENST00000409808 TRIM66O15016 1216 aa21.54■■□□□ 1.04
LIMS2-207ENST00000409808 RGS20O76081 388 aa21.54■■□□□ 1.04
LIMS2-207ENST00000409808 EYA4O95677 639 aa21.54■■□□□ 1.04
LIMS2-207ENST00000409808 KLRC1P26715 233 aa21.54■■□□□ 1.04
LIMS2-207ENST00000409808 KIAA0753Q2KHM9 967 aa21.54■■□□□ 1.04
LIMS2-207ENST00000409808 RIOX2Q8IUF8 465 aa21.54■■□□□ 1.04
LIMS2-207ENST00000409808 NELFCDQ8IXH7 590 aa21.54■■□□□ 1.04
LIMS2-207ENST00000409808 REEP2Q9BRK0 252 aa21.54■■□□□ 1.04
LIMS2-207ENST00000409808 LXNQ9BS40 222 aa21.54■■□□□ 1.04
LIMS2-207ENST00000409808 ASTN1O14525 1302 aa21.54■■□□□ 1.04
LIMS2-207ENST00000409808 DOCK5Q9H7D0 1870 aa21.54■■□□□ 1.04
LIMS2-207ENST00000409808 RSPH10B2B2RC85 870 aa21.54■■□□□ 1.04
LIMS2-207ENST00000409808 RSPH10BP0C881 870 aa21.54■■□□□ 1.04
LIMS2-207ENST00000409808 TNNC1P63316 161 aa21.54■■□□□ 1.04
LIMS2-207ENST00000409808 KCNH2Q12809 1159 aa21.54■■□□□ 1.04
LIMS2-207ENST00000409808 C1orf131Q8NDD1 294 aaKnown RBP21.54■■□□□ 1.04
LIMS2-207ENST00000409808 CHST13Q8NET6 341 aa21.54■■□□□ 1.04
LIMS2-207ENST00000409808 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP21.54■■□□□ 1.04
LIMS2-207ENST00000409808 MOV10L1Q9BXT6 1211 aaKnown RBP21.54■■□□□ 1.04
LIMS2-207ENST00000409808 SAMM50Q9Y512 469 aa21.54■■□□□ 1.04
LIMS2-207ENST00000409808 A0A087X0T9 212 aa21.53■■□□□ 1.04
LIMS2-207ENST00000409808 FAM228BP0C875 321 aa21.53■■□□□ 1.04
LIMS2-207ENST00000409808 ERCC3P19447 782 aa21.53■■□□□ 1.04
LIMS2-207ENST00000409808 Q3C1V9 767 aa21.53■■□□□ 1.04
LIMS2-207ENST00000409808 CD302Q8IX05 232 aa21.53■■□□□ 1.04
LIMS2-207ENST00000409808 WHAMMQ8TF30 809 aa21.53■■□□□ 1.04
LIMS2-207ENST00000409808 ZNF526Q8TF50 670 aaPredicted RBP21.53■■□□□ 1.04
LIMS2-207ENST00000409808 TAF4BQ92750 862 aa21.53■■□□□ 1.04
LIMS2-207ENST00000409808 SMARCAL1Q9NZC9 954 aa21.53■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms