RNA–Protein interactions for RNA: ENST00000409747.5

CBX3-203, Transcript of chromobox 3, humanhuman

TSL 1 (best) BASIC

Gene CBX3, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-203ENST00000409747 DRP2Q13474 957 aa16.53■□□□□ 0.24
CBX3-203ENST00000409747 ANO5Q75V66 913 aa16.53■□□□□ 0.24
CBX3-203ENST00000409747 RHPN2Q8IUC4 686 aa16.53■□□□□ 0.24
CBX3-203ENST00000409747 SLFN12Q8IYM2 578 aa16.53■□□□□ 0.24
CBX3-203ENST00000409747 RNF169Q8NCN4 708 aa16.53■□□□□ 0.24
CBX3-203ENST00000409747 MSLNLQ96KJ4 702 aa16.53■□□□□ 0.24
CBX3-203ENST00000409747 ZNF558Q96NG5 402 aa16.53■□□□□ 0.24
CBX3-203ENST00000409747 CYP26B1Q9NR63 512 aa16.53■□□□□ 0.24
CBX3-203ENST00000409747 CARNS1A5YM72 827 aa16.52■□□□□ 0.24
CBX3-203ENST00000409747 C19orf67A6NJJ6 358 aa16.52■□□□□ 0.24
CBX3-203ENST00000409747 BAG4O95429 457 aaKnown RBP16.52■□□□□ 0.24
CBX3-203ENST00000409747 CTDNEP1O95476 244 aa16.52■□□□□ 0.24
CBX3-203ENST00000409747 EYA4O95677 639 aa16.52■□□□□ 0.24
CBX3-203ENST00000409747 SRGAP2BP0DMP2 458 aa16.52■□□□□ 0.24
CBX3-203ENST00000409747 RBM23Q86U06 439 aaKnown RBP16.52■□□□□ 0.24
CBX3-203ENST00000409747 MRPS27Q92552 414 aaKnown RBP16.52■□□□□ 0.24
CBX3-203ENST00000409747 GTF3C6Q969F1 213 aa16.52■□□□□ 0.24
CBX3-203ENST00000409747 TRAIPQ9BWF2 469 aa16.52■□□□□ 0.24
CBX3-203ENST00000409747 RNF19AQ9NV58 838 aa16.52■□□□□ 0.24
CBX3-203ENST00000409747 HCSTQ9UBK5 93 aa16.52■□□□□ 0.24
CBX3-203ENST00000409747 C5orf42Q9H799 3197 aa16.51■□□□□ 0.23
CBX3-203ENST00000409747 A0A087WZ62 844 aa16.51■□□□□ 0.23
CBX3-203ENST00000409747 EML1O00423 815 aa16.51■□□□□ 0.23
CBX3-203ENST00000409747 DCXO43602 365 aa16.51■□□□□ 0.23
CBX3-203ENST00000409747 GAS2O43903 313 aaKnown RBP16.51■□□□□ 0.23
CBX3-203ENST00000409747 FGFR4P22455 802 aa16.51■□□□□ 0.23
CBX3-203ENST00000409747 RFC5P40937 340 aa16.51■□□□□ 0.23
CBX3-203ENST00000409747 KRT17Q04695 432 aa16.51■□□□□ 0.23
CBX3-203ENST00000409747 COASYQ13057 564 aa16.51■□□□□ 0.23
CBX3-203ENST00000409747 PLA2G4FQ68DD2 849 aa16.51■□□□□ 0.23
CBX3-203ENST00000409747 KCNT2Q6UVM3 1135 aa16.51■□□□□ 0.23
CBX3-203ENST00000409747 ZNF598Q86UK7 904 aaKnown RBP16.51■□□□□ 0.23
CBX3-203ENST00000409747 OXER1Q8TDS5 423 aa16.51■□□□□ 0.23
CBX3-203ENST00000409747 SH2D3AQ9BRG2 576 aa16.51■□□□□ 0.23
CBX3-203ENST00000409747 FDXACB1Q9BRP7 624 aaPredicted RBP16.51■□□□□ 0.23
CBX3-203ENST00000409747 GJB4Q9NTQ9 266 aa16.51■□□□□ 0.23
CBX3-203ENST00000409747 RAB27AP51159 221 aa16.5■□□□□ 0.23
CBX3-203ENST00000409747 POLGP54098 1239 aaPredicted RBP16.5■□□□□ 0.23
CBX3-203ENST00000409747 EPHA7Q15375 998 aa16.5■□□□□ 0.23
CBX3-203ENST00000409747 CLLU1OSQ5K130 101 aa16.5■□□□□ 0.23
CBX3-203ENST00000409747 TWF2Q6IBS0 349 aaKnown RBP16.5■□□□□ 0.23
CBX3-203ENST00000409747 OTUD6AQ7L8S5 288 aa16.5■□□□□ 0.23
CBX3-203ENST00000409747 POTEDQ86YR6 584 aa16.5■□□□□ 0.23
CBX3-203ENST00000409747 C4orf19Q8IY42 314 aa16.5■□□□□ 0.23
CBX3-203ENST00000409747 SMRP1Q8NCR6 262 aa16.5■□□□□ 0.23
CBX3-203ENST00000409747 HAS1Q92839 578 aa16.5■□□□□ 0.23
CBX3-203ENST00000409747 CEP170P1Q96L14 293 aa16.5■□□□□ 0.23
CBX3-203ENST00000409747 NLRP4Q96MN2 994 aa16.5■□□□□ 0.23
CBX3-203ENST00000409747 LXNQ9BS40 222 aa16.5■□□□□ 0.23
CBX3-203ENST00000409747 NGRNQ9NPE2 291 aaKnown RBP16.5■□□□□ 0.23
CBX3-203ENST00000409747 ENTPD7Q9NQZ7 604 aa16.5■□□□□ 0.23
CBX3-203ENST00000409747 SPG21Q9NZD8 308 aa16.5■□□□□ 0.23
CBX3-203ENST00000409747 CLEC1BQ9P126 229 aa16.5■□□□□ 0.23
CBX3-203ENST00000409747 PIN4Q9Y237 131 aaKnown RBP16.5■□□□□ 0.23
CBX3-203ENST00000409747 ARIH1Q9Y4X5 557 aaPredicted RBP16.5■□□□□ 0.23
CBX3-203ENST00000409747 FSCN2O14926 492 aa16.5■□□□□ 0.23
CBX3-203ENST00000409747 PHKA2P46019 1235 aa16.5■□□□□ 0.23
CBX3-203ENST00000409747 ERVFC1P60507 584 aa16.5■□□□□ 0.23
CBX3-203ENST00000409747 TRIM29Q14134 588 aa16.5■□□□□ 0.23
CBX3-203ENST00000409747 ME3Q16798 604 aa16.5■□□□□ 0.23
CBX3-203ENST00000409747 DUSP6Q16828 381 aa16.5■□□□□ 0.23
CBX3-203ENST00000409747 NCAPH2Q6IBW4 605 aa16.5■□□□□ 0.23
CBX3-203ENST00000409747 LRRC55Q6ZSA7 311 aa16.5■□□□□ 0.23
CBX3-203ENST00000409747 CATSPER4Q7RTX7 472 aa16.5■□□□□ 0.23
CBX3-203ENST00000409747 HELQQ8TDG4 1101 aa16.5■□□□□ 0.23
CBX3-203ENST00000409747 PSPC1Q8WXF1 523 aaKnown RBP16.5■□□□□ 0.23
CBX3-203ENST00000409747 TCF25Q9BQ70 676 aa16.5■□□□□ 0.23
CBX3-203ENST00000409747 C11orf16Q9NQ32 467 aa16.5■□□□□ 0.23
CBX3-203ENST00000409747 PCDHGC5Q9Y5F6 944 aa16.5■□□□□ 0.23
CBX3-203ENST00000409747 COL4A3BPQ9Y5P4 624 aa16.5■□□□□ 0.23
CBX3-203ENST00000409747 FAM86C2PA6NEL3 165 aa16.49■□□□□ 0.23
CBX3-203ENST00000409747 PRR33A8MZF0 331 aa16.49■□□□□ 0.23
CBX3-203ENST00000409747 CSDE1O75534 798 aaKnown RBP16.49■□□□□ 0.23
CBX3-203ENST00000409747 GLP2RO95838 553 aa16.49■□□□□ 0.23
CBX3-203ENST00000409747 ATF7P17544 494 aaPredicted RBP16.49■□□□□ 0.23
CBX3-203ENST00000409747 YWHABP31946 246 aaKnown RBP16.49■□□□□ 0.23
CBX3-203ENST00000409747 NR5A1Q13285 461 aa16.49■□□□□ 0.23
CBX3-203ENST00000409747 NECAB1Q8N987 351 aa16.49■□□□□ 0.23
CBX3-203ENST00000409747 TCP11Q8WWU5 503 aa16.49■□□□□ 0.23
CBX3-203ENST00000409747 DHX33Q9H6R0 707 aaKnown RBP16.49■□□□□ 0.23
CBX3-203ENST00000409747 ZSWIM4Q9H7M6 989 aa16.49■□□□□ 0.23
CBX3-203ENST00000409747 RAPGEFL1Q9UHV5 662 aa16.49■□□□□ 0.23
CBX3-203ENST00000409747 BARX2Q9UMQ3 279 aaPredicted RBP16.49■□□□□ 0.23
CBX3-203ENST00000409747 FDPSP14324 419 aaKnown RBP16.48■□□□□ 0.23
CBX3-203ENST00000409747 ALDH7A1P49419 539 aaKnown RBP16.48■□□□□ 0.23
CBX3-203ENST00000409747 NEK4P51957 841 aa16.48■□□□□ 0.23
CBX3-203ENST00000409747 NPEPPSP55786 919 aa16.48■□□□□ 0.23
CBX3-203ENST00000409747 BMS1Q14692 1282 aaKnown RBP16.48■□□□□ 0.23
CBX3-203ENST00000409747 PLPP4Q5VZY2 271 aa16.48■□□□□ 0.23
CBX3-203ENST00000409747 PER2O15055 1255 aa16.48■□□□□ 0.23
CBX3-203ENST00000409747 EARS2Q5JPH6 523 aaKnown RBP16.48■□□□□ 0.23
CBX3-203ENST00000409747 GLB1LQ6UWU2 654 aa16.48■□□□□ 0.23
CBX3-203ENST00000409747 SRGAP1Q7Z6B7 1085 aa16.48■□□□□ 0.23
CBX3-203ENST00000409747 SLC39A11Q8N1S5 342 aa16.48■□□□□ 0.23
CBX3-203ENST00000409747 NSUN7Q8NE18 718 aaKnown RBP16.48■□□□□ 0.23
CBX3-203ENST00000409747 TNFRSF25Q93038 417 aa16.48■□□□□ 0.23
CBX3-203ENST00000409747 PGBD4Q96DM1 585 aa16.48■□□□□ 0.23
CBX3-203ENST00000409747 IFT122Q9HBG6 1241 aa16.48■□□□□ 0.23
CBX3-203ENST00000409747 AGPAT5Q9NUQ2 364 aa16.48■□□□□ 0.23
CBX3-203ENST00000409747 FAM105AQ9NUU6 356 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 77.8 ms