RNA–Protein interactions for RNA: ENST00000409483.5

PTPRN2-205, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPRN2, Length 4,711 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-205ENST00000409483 SEMA6BQ9H3T3 888 aa17.72■□□□□ 0.43
PTPRN2-205ENST00000409483 ATP6V0A4Q9HBG4 840 aa17.72■□□□□ 0.43
PTPRN2-205ENST00000409483 MRPL47Q9HD33 250 aaKnown RBP17.72■□□□□ 0.43
PTPRN2-205ENST00000409483 ARHGAP23Q9P227 1491 aa17.71■□□□□ 0.43
PTPRN2-205ENST00000409483 GOLGA8MH3BSY2 632 aa17.71■□□□□ 0.43
PTPRN2-205ENST00000409483 PSMD14O00487 310 aa17.71■□□□□ 0.43
PTPRN2-205ENST00000409483 YWHABP31946 246 aaKnown RBP17.71■□□□□ 0.43
PTPRN2-205ENST00000409483 SNX16P57768 344 aa17.71■□□□□ 0.43
PTPRN2-205ENST00000409483 FRMD5Q7Z6J6 570 aa17.71■□□□□ 0.43
PTPRN2-205ENST00000409483 DDX42Q86XP3 938 aaKnown RBP eCLIP17.71■□□□□ 0.43
PTPRN2-205ENST00000409483 C1orf54Q8WWF1 131 aa17.71■□□□□ 0.43
PTPRN2-205ENST00000409483 ADAM33Q9BZ11 813 aa17.71■□□□□ 0.43
PTPRN2-205ENST00000409483 KBTBD4Q9NVX7 518 aa17.71■□□□□ 0.43
PTPRN2-205ENST00000409483 PCK1P35558 622 aa17.71■□□□□ 0.43
PTPRN2-205ENST00000409483 TFDP1Q14186 410 aa17.71■□□□□ 0.43
PTPRN2-205ENST00000409483 ZNF70Q9UC06 446 aaPredicted RBP17.71■□□□□ 0.43
PTPRN2-205ENST00000409483 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.71■□□□□ 0.43
PTPRN2-205ENST00000409483 I3L4J1 428 aa17.71■□□□□ 0.43
PTPRN2-205ENST00000409483 MAGOHP61326 146 aaKnown RBP17.71■□□□□ 0.43
PTPRN2-205ENST00000409483 KRT76Q01546 638 aa17.71■□□□□ 0.43
PTPRN2-205ENST00000409483 NEDD9Q14511 834 aa17.71■□□□□ 0.43
PTPRN2-205ENST00000409483 EPC2Q52LR7 807 aa17.71■□□□□ 0.43
PTPRN2-205ENST00000409483 NUDT12Q9BQG2 462 aa17.71■□□□□ 0.43
PTPRN2-205ENST00000409483 KIFC3Q9BVG8 833 aa17.71■□□□□ 0.43
PTPRN2-205ENST00000409483 L2HGDHQ9H9P8 463 aa17.71■□□□□ 0.43
PTPRN2-205ENST00000409483 ABL1P00519 1130 aa17.7■□□□□ 0.42
PTPRN2-205ENST00000409483 ZNF18P17022 549 aa17.7■□□□□ 0.42
PTPRN2-205ENST00000409483 ACOT2P49753 483 aa17.7■□□□□ 0.42
PTPRN2-205ENST00000409483 FXR2P51116 673 aaKnown RBP eCLIP17.7■□□□□ 0.42
PTPRN2-205ENST00000409483 PSMC5P62195 406 aa17.7■□□□□ 0.42
PTPRN2-205ENST00000409483 STXBP2Q15833 593 aa17.7■□□□□ 0.42
PTPRN2-205ENST00000409483 HEXIM2Q96MH2 286 aaKnown RBP17.7■□□□□ 0.42
PTPRN2-205ENST00000409483 KCNQ5Q9NR82 932 aa17.7■□□□□ 0.42
PTPRN2-205ENST00000409483 CAPN6Q9Y6Q1 641 aa17.7■□□□□ 0.42
PTPRN2-205ENST00000409483 ATMINO43313 823 aaPredicted RBP17.7■□□□□ 0.42
PTPRN2-205ENST00000409483 CYP11B2P19099 503 aa17.7■□□□□ 0.42
PTPRN2-205ENST00000409483 MCPH1Q8NEM0 835 aa17.7■□□□□ 0.42
PTPRN2-205ENST00000409483 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.7■□□□□ 0.424e-6■□□□□ 11.2
PTPRN2-205ENST00000409483 NGRNQ9NPE2 291 aaKnown RBP17.7■□□□□ 0.42
PTPRN2-205ENST00000409483 MYO3BQ8WXR4 1341 aa17.7■□□□□ 0.42
PTPRN2-205ENST00000409483 A0A0U1RQJ8 604 aa17.7■□□□□ 0.42
PTPRN2-205ENST00000409483 NDC80O14777 642 aa17.7■□□□□ 0.42
PTPRN2-205ENST00000409483 COPB2P35606 906 aa17.7■□□□□ 0.42
PTPRN2-205ENST00000409483 CUL1Q13616 776 aa17.7■□□□□ 0.42
PTPRN2-205ENST00000409483 LGSNQ5TDP6 509 aa17.7■□□□□ 0.42
PTPRN2-205ENST00000409483 CCDC197Q8NCU1 140 aa17.7■□□□□ 0.42
PTPRN2-205ENST00000409483 CYP2W1Q8TAV3 490 aa17.7■□□□□ 0.42
PTPRN2-205ENST00000409483 POLR3FQ9H1D9 316 aaPredicted RBP17.7■□□□□ 0.42
PTPRN2-205ENST00000409483 CCDC160A6NGH7 325 aa17.7■□□□□ 0.42
PTPRN2-205ENST00000409483 WNT7AO00755 349 aa17.7■□□□□ 0.42
PTPRN2-205ENST00000409483 CASP4P49662 377 aa17.7■□□□□ 0.42
PTPRN2-205ENST00000409483 KRT39Q6A163 491 aa17.7■□□□□ 0.42
PTPRN2-205ENST00000409483 CCDC62Q6P9F0 684 aa17.7■□□□□ 0.42
PTPRN2-205ENST00000409483 TMEM143Q96AN5 459 aa17.7■□□□□ 0.42
PTPRN2-205ENST00000409483 RUSC1Q9BVN2 902 aa17.7■□□□□ 0.42
PTPRN2-205ENST00000409483 A0A087X0T9 212 aa17.69■□□□□ 0.42
PTPRN2-205ENST00000409483 M0QZ92 97 aa17.69■□□□□ 0.42
PTPRN2-205ENST00000409483 MSH4O15457 936 aa17.69■□□□□ 0.42
PTPRN2-205ENST00000409483 SART1O43290 800 aaKnown RBP17.69■□□□□ 0.42
PTPRN2-205ENST00000409483 ZRANB2O95218 330 aaKnown RBP eCLIP17.69■□□□□ 0.42
PTPRN2-205ENST00000409483 FAM228BP0C875 321 aa17.69■□□□□ 0.42
PTPRN2-205ENST00000409483 PHBP35232 272 aa17.69■□□□□ 0.42
PTPRN2-205ENST00000409483 ALCAMQ13740 583 aa17.69■□□□□ 0.42
PTPRN2-205ENST00000409483 E2F5Q15329 346 aa17.69■□□□□ 0.42
PTPRN2-205ENST00000409483 CDKAL1Q5VV42 579 aa17.69■□□□□ 0.42
PTPRN2-205ENST00000409483 ERICH1Q86X53 443 aa17.69■□□□□ 0.42
PTPRN2-205ENST00000409483 OR2W6PQ8NHA6 318 aa17.69■□□□□ 0.42
PTPRN2-205ENST00000409483 TRIM51Q9BSJ1 452 aa17.69■□□□□ 0.42
PTPRN2-205ENST00000409483 KRT14P02533 472 aa17.69■□□□□ 0.42
PTPRN2-205ENST00000409483 RPA1P27694 616 aa17.69■□□□□ 0.42
PTPRN2-205ENST00000409483 FMO5P49326 533 aa17.69■□□□□ 0.42
PTPRN2-205ENST00000409483 TRIM11Q96F44 468 aa17.69■□□□□ 0.42
PTPRN2-205ENST00000409483 OTUD5Q96G74 571 aa17.69■□□□□ 0.42
PTPRN2-205ENST00000409483 RSRC1Q96IZ7 334 aaKnown RBP17.69■□□□□ 0.42
PTPRN2-205ENST00000409483 RNPC3Q96LT9 517 aaKnown RBP17.69■□□□□ 0.42
PTPRN2-205ENST00000409483 KLHL11Q9NVR0 708 aa17.69■□□□□ 0.42
PTPRN2-205ENST00000409483 SEL1LQ9UBV2 794 aa17.69■□□□□ 0.42
PTPRN2-205ENST00000409483 PCSK1NQ9UHG2 260 aa17.69■□□□□ 0.42
PTPRN2-205ENST00000409483 FBXL5Q9UKA1 691 aa17.69■□□□□ 0.42
PTPRN2-205ENST00000409483 EXOC1LA0A1B0GW35 172 aa17.69■□□□□ 0.42
PTPRN2-205ENST00000409483 HDLBPQ00341 1268 aaKnown RBP17.69■□□□□ 0.42
PTPRN2-205ENST00000409483 CCDC38Q502W7 563 aa17.69■□□□□ 0.42
PTPRN2-205ENST00000409483 KCTD6Q8NC69 237 aa17.69■□□□□ 0.42
PTPRN2-205ENST00000409483 LRRC8CQ8TDW0 803 aa17.69■□□□□ 0.42
PTPRN2-205ENST00000409483 HSPH1Q92598 858 aa17.69■□□□□ 0.42
PTPRN2-205ENST00000409483 DDX4Q9NQI0 724 aaKnown RBP17.69■□□□□ 0.42
PTPRN2-205ENST00000409483 MYO1CO00159 1063 aa17.69■□□□□ 0.42
PTPRN2-205ENST00000409483 TTI1O43156 1089 aa17.69■□□□□ 0.42
PTPRN2-205ENST00000409483 GUCY1A3Q02108 690 aa17.69■□□□□ 0.42
PTPRN2-205ENST00000409483 RFFLQ8WZ73 363 aa17.69■□□□□ 0.42
PTPRN2-205ENST00000409483 DNAJC5Q9H3Z4 198 aa17.69■□□□□ 0.42
PTPRN2-205ENST00000409483 PCDHA10Q9Y5I2 948 aa17.69■□□□□ 0.42
PTPRN2-205ENST00000409483 RIC1Q4ADV7 1423 aa17.69■□□□□ 0.42
PTPRN2-205ENST00000409483 CARSP49589 748 aaKnown RBP17.68■□□□□ 0.42
PTPRN2-205ENST00000409483 SESN3P58005 492 aa17.68■□□□□ 0.42
PTPRN2-205ENST00000409483 SMAD1Q15797 465 aaKnown RBP17.68■□□□□ 0.42
PTPRN2-205ENST00000409483 GLE1Q53GS7 698 aaKnown RBP17.68■□□□□ 0.42
PTPRN2-205ENST00000409483 RHPN2Q8IUC4 686 aa17.68■□□□□ 0.42
PTPRN2-205ENST00000409483 CCNYQ8ND76 341 aa17.68■□□□□ 0.42
PTPRN2-205ENST00000409483 VCPKMTQ9H867 229 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms