RNA–Protein interactions for RNA: ENST00000409141.5

PDLIM2-206, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 1,463 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-206ENST00000409141 FIBCD1Q8N539 461 aa19.95■□□□□ 0.78
PDLIM2-206ENST00000409141 RNF149Q8NC42 400 aa19.95■□□□□ 0.78
PDLIM2-206ENST00000409141 ZNF689Q96CS4 500 aaPredicted RBP19.95■□□□□ 0.78
PDLIM2-206ENST00000409141 DDX19AQ9NUU7 478 aaKnown RBP19.95■□□□□ 0.78
PDLIM2-206ENST00000409141 ARL2P36404 184 aa19.94■□□□□ 0.78
PDLIM2-206ENST00000409141 FAM189BP81408 668 aa19.94■□□□□ 0.78
PDLIM2-206ENST00000409141 TFDP1Q14186 410 aa19.94■□□□□ 0.78
PDLIM2-206ENST00000409141 BTG3Q14201 252 aaPredicted RBP19.94■□□□□ 0.78
PDLIM2-206ENST00000409141 PADI6Q6TGC4 694 aa19.94■□□□□ 0.78
PDLIM2-206ENST00000409141 CATSPER4Q7RTX7 472 aa19.94■□□□□ 0.78
PDLIM2-206ENST00000409141 SRGAP1Q7Z6B7 1085 aa19.94■□□□□ 0.78
PDLIM2-206ENST00000409141 MAFAQ8NHW3 353 aaPredicted RBP19.94■□□□□ 0.78
PDLIM2-206ENST00000409141 C17orf80Q9BSJ5 609 aa19.94■□□□□ 0.78
PDLIM2-206ENST00000409141 CHST12Q9NRB3 414 aa19.94■□□□□ 0.78
PDLIM2-206ENST00000409141 PHKA2P46019 1235 aa19.93■□□□□ 0.78
PDLIM2-206ENST00000409141 ZRSR1Q15695 479 aaKnown RBP19.93■□□□□ 0.78
PDLIM2-206ENST00000409141 MCPH1Q8NEM0 835 aa19.93■□□□□ 0.78
PDLIM2-206ENST00000409141 ASAP3Q8TDY4 903 aa19.93■□□□□ 0.78
PDLIM2-206ENST00000409141 POLR3FQ9H1D9 316 aaPredicted RBP19.93■□□□□ 0.78
PDLIM2-206ENST00000409141 BHMT2Q9H2M3 363 aa19.93■□□□□ 0.78
PDLIM2-206ENST00000409141 RC3H2Q9HBD1 1191 aaKnown RBP19.93■□□□□ 0.78
PDLIM2-206ENST00000409141 DACT1Q9NYF0 836 aa19.93■□□□□ 0.78
PDLIM2-206ENST00000409141 DNM3Q9UQ16 869 aa19.93■□□□□ 0.78
PDLIM2-206ENST00000409141 ADGRA3Q8IWK6 1321 aa19.93■□□□□ 0.78
PDLIM2-206ENST00000409141 FAM173BQ6P4H8 233 aa19.92■□□□□ 0.78
PDLIM2-206ENST00000409141 SPRYD3Q8NCJ5 442 aa19.92■□□□□ 0.78
PDLIM2-206ENST00000409141 SAMD11Q96NU1 681 aa19.92■□□□□ 0.78
PDLIM2-206ENST00000409141 MMTAG2Q9BU76 263 aaKnown RBP19.92■□□□□ 0.78
PDLIM2-206ENST00000409141 ZSCAN16Q9H4T2 348 aaPredicted RBP19.92■□□□□ 0.78
PDLIM2-206ENST00000409141 ELAC1Q9H777 363 aaKnown RBP19.92■□□□□ 0.78
PDLIM2-206ENST00000409141 MINDY3Q9H8M7 445 aa19.92■□□□□ 0.78
PDLIM2-206ENST00000409141 TMEM161AQ9NX61 479 aa19.92■□□□□ 0.78
PDLIM2-206ENST00000409141 PIN4Q9Y237 131 aaKnown RBP19.92■□□□□ 0.78
PDLIM2-206ENST00000409141 ARID2Q68CP9 1835 aa19.92■□□□□ 0.78
PDLIM2-206ENST00000409141 E9PMD0 336 aa19.92■□□□□ 0.78
PDLIM2-206ENST00000409141 CYP11B2P19099 503 aa19.92■□□□□ 0.78
PDLIM2-206ENST00000409141 GLRA2P23416 452 aa19.92■□□□□ 0.78
PDLIM2-206ENST00000409141 POU5F1BQ06416 359 aa19.92■□□□□ 0.78
PDLIM2-206ENST00000409141 GRB10Q13322 594 aa19.92■□□□□ 0.78
PDLIM2-206ENST00000409141 PAN2Q504Q3 1202 aaKnown RBP19.92■□□□□ 0.78
PDLIM2-206ENST00000409141 FAM102BQ5T8I3 360 aa19.92■□□□□ 0.78
PDLIM2-206ENST00000409141 TMEM192Q8IY95 271 aa19.92■□□□□ 0.78
PDLIM2-206ENST00000409141 CMTR2Q8IYT2 770 aaKnown RBP19.92■□□□□ 0.78
PDLIM2-206ENST00000409141 FBXO22Q8NEZ5 403 aa19.92■□□□□ 0.78
PDLIM2-206ENST00000409141 GPRC5CQ9NQ84 441 aa19.92■□□□□ 0.78
PDLIM2-206ENST00000409141 CLIC4Q9Y696 253 aa19.92■□□□□ 0.78
PDLIM2-206ENST00000409141 GTPBP6O43824 516 aaPredicted RBP19.91■□□□□ 0.78
PDLIM2-206ENST00000409141 EYA4O95677 639 aa19.91■□□□□ 0.78
PDLIM2-206ENST00000409141 GATMP50440 423 aa19.91■□□□□ 0.78
PDLIM2-206ENST00000409141 PTENP60484 403 aa19.91■□□□□ 0.78
PDLIM2-206ENST00000409141 CAPSQ13938 189 aa19.91■□□□□ 0.78
PDLIM2-206ENST00000409141 EPC2Q52LR7 807 aa19.91■□□□□ 0.78
PDLIM2-206ENST00000409141 TWF2Q6IBS0 349 aaKnown RBP19.91■□□□□ 0.78
PDLIM2-206ENST00000409141 RNF169Q8NCN4 708 aa19.91■□□□□ 0.78
PDLIM2-206ENST00000409141 PPM1EQ8WY54 764 aa19.91■□□□□ 0.78
PDLIM2-206ENST00000409141 AK8Q96MA6 479 aa19.91■□□□□ 0.78
PDLIM2-206ENST00000409141 A0A0U1RQF3 1178 aa19.9■□□□□ 0.78
PDLIM2-206ENST00000409141 CEBPZQ03701 1054 aaKnown RBP19.9■□□□□ 0.78
PDLIM2-206ENST00000409141 ECHDC2Q86YB7 292 aa19.9■□□□□ 0.78
PDLIM2-206ENST00000409141 GDPD5Q8WTR4 605 aa19.9■□□□□ 0.78
PDLIM2-206ENST00000409141 CDK5RAP3Q96JB5 506 aa19.9■□□□□ 0.78
PDLIM2-206ENST00000409141 PLIN2Q99541 437 aa19.9■□□□□ 0.78
PDLIM2-206ENST00000409141 CDH23Q9H251 3354 aa19.89■□□□□ 0.78
PDLIM2-206ENST00000409141 TBKBP1A7MCY6 615 aa19.89■□□□□ 0.77
PDLIM2-206ENST00000409141 INO80B-WBP1J3KQ70 363 aa19.89■□□□□ 0.77
PDLIM2-206ENST00000409141 ERLIN2O94905 339 aa19.89■□□□□ 0.77
PDLIM2-206ENST00000409141 FGFR1P11362 822 aa19.89■□□□□ 0.77
PDLIM2-206ENST00000409141 PDIA4P13667 645 aaKnown RBP19.89■□□□□ 0.77
PDLIM2-206ENST00000409141 LONP1P36776 959 aaKnown RBP19.89■□□□□ 0.77
PDLIM2-206ENST00000409141 CABP7Q86V35 215 aa19.89■□□□□ 0.77
PDLIM2-206ENST00000409141 MICALL1Q8N3F8 863 aa19.89■□□□□ 0.77
PDLIM2-206ENST00000409141 NT5C3AQ9H0P0 336 aa19.89■□□□□ 0.77
PDLIM2-206ENST00000409141 AGPAT5Q9NUQ2 364 aa19.89■□□□□ 0.77
PDLIM2-206ENST00000409141 CHD7Q9P2D1 2997 aa19.89■□□□□ 0.77
PDLIM2-206ENST00000409141 RWDD3Q9Y3V2 267 aa19.89■□□□□ 0.77
PDLIM2-206ENST00000409141 MTCH2Q9Y6C9 303 aa19.89■□□□□ 0.77
PDLIM2-206ENST00000409141 LRRIQ4A6NIV6 560 aa19.88■□□□□ 0.77
PDLIM2-206ENST00000409141 HOXA2O43364 376 aa19.88■□□□□ 0.77
PDLIM2-206ENST00000409141 LPXNO60711 386 aa19.88■□□□□ 0.77
PDLIM2-206ENST00000409141 EOMESO95936 686 aa19.88■□□□□ 0.77
PDLIM2-206ENST00000409141 POU3F3P20264 500 aaPredicted RBP19.88■□□□□ 0.77
PDLIM2-206ENST00000409141 CTNNB1P35222 781 aa19.88■□□□□ 0.77
PDLIM2-206ENST00000409141 BMPR1AP36894 532 aa19.88■□□□□ 0.77
PDLIM2-206ENST00000409141 UBA7P41226 1012 aa19.88■□□□□ 0.77
PDLIM2-206ENST00000409141 NCBP1Q09161 790 aaKnown RBP19.88■□□□□ 0.77
PDLIM2-206ENST00000409141 PTPAQ15257 358 aa19.88■□□□□ 0.77
PDLIM2-206ENST00000409141 PCBP1Q15365 356 aaKnown RBP eCLIP19.88■□□□□ 0.77
PDLIM2-206ENST00000409141 CCDC85BQ15834 202 aaPredicted RBP19.88■□□□□ 0.77
PDLIM2-206ENST00000409141 HYIQ5T013 277 aa19.88■□□□□ 0.77
PDLIM2-206ENST00000409141 FOXD4L5Q5VV16 416 aaPredicted RBP19.88■□□□□ 0.77
PDLIM2-206ENST00000409141 KCNK18Q7Z418 384 aa19.88■□□□□ 0.77
PDLIM2-206ENST00000409141 IFNLR1Q8IU57 520 aaPredicted RBP19.88■□□□□ 0.77
PDLIM2-206ENST00000409141 KCTD17Q8N5Z5 321 aa19.88■□□□□ 0.77
PDLIM2-206ENST00000409141 FOXD4L4Q8WXT5 416 aaPredicted RBP19.88■□□□□ 0.77
PDLIM2-206ENST00000409141 CLP1Q92989 425 aaKnown RBP19.88■□□□□ 0.77
PDLIM2-206ENST00000409141 PNMA5Q96PV4 448 aa19.88■□□□□ 0.77
PDLIM2-206ENST00000409141 TRAIPQ9BWF2 469 aa19.88■□□□□ 0.77
PDLIM2-206ENST00000409141 POLD4Q9HCU8 107 aa19.88■□□□□ 0.77
PDLIM2-206ENST00000409141 MRPL42Q9Y6G3 142 aaKnown RBP19.88■□□□□ 0.77
PDLIM2-206ENST00000409141 COL4A6Q14031 1691 aa19.88■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms