RNA–Protein interactions for RNA: ENST00000409088.3

LRRTM4-201, Transcript of leucine rich repeat transmembrane neuronal 4, humanhuman

TSL 1 (best) BASIC

Gene LRRTM4, Length 3,616 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM4-201ENST00000409088 AFPP02771 609 aaKnown RBP4.36□□□□□ -1.71
LRRTM4-201ENST00000409088 ACTN1P12814 892 aa4.36□□□□□ -1.71
LRRTM4-201ENST00000409088 SLC9A1P19634 815 aa4.36□□□□□ -1.71
LRRTM4-201ENST00000409088 SFNP31947 248 aa4.36□□□□□ -1.71
LRRTM4-201ENST00000409088 EPHX2P34913 555 aa4.36□□□□□ -1.71
LRRTM4-201ENST00000409088 EIF4A3P38919 411 aaKnown RBP4.36□□□□□ -1.71
LRRTM4-201ENST00000409088 HERVK_113P62684 666 aa4.36□□□□□ -1.71
LRRTM4-201ENST00000409088 KRT83P78385 493 aa4.36□□□□□ -1.71
LRRTM4-201ENST00000409088 IRX3P78415 501 aaPredicted RBP4.36□□□□□ -1.71
LRRTM4-201ENST00000409088 ARID5AQ03989 594 aa4.36□□□□□ -1.71
LRRTM4-201ENST00000409088 FSTL1Q12841 308 aa4.36□□□□□ -1.71
LRRTM4-201ENST00000409088 TDRD12Q587J7 1177 aaKnown RBP4.36□□□□□ -1.71
LRRTM4-201ENST00000409088 SWSAP1Q6NVH7 229 aa4.36□□□□□ -1.71
LRRTM4-201ENST00000409088 LBX2Q6XYB7 198 aa4.36□□□□□ -1.71
LRRTM4-201ENST00000409088 NUDT18Q6ZVK8 323 aa4.36□□□□□ -1.71
LRRTM4-201ENST00000409088 C4orf19Q8IY42 314 aa4.36□□□□□ -1.71
LRRTM4-201ENST00000409088 FAM186BQ8IYM0 893 aa4.36□□□□□ -1.71
LRRTM4-201ENST00000409088 CCDC170Q8IYT3 715 aa4.36□□□□□ -1.71
LRRTM4-201ENST00000409088 BAP1Q92560 729 aa4.36□□□□□ -1.71
LRRTM4-201ENST00000409088 CDCA5Q96FF9 252 aa4.36□□□□□ -1.71
LRRTM4-201ENST00000409088 MOV10L1Q9BXT6 1211 aaKnown RBP4.36□□□□□ -1.71
LRRTM4-201ENST00000409088 METTL14Q9HCE5 456 aaKnown RBP4.36□□□□□ -1.71
LRRTM4-201ENST00000409088 ARHGAP20Q9P2F6 1191 aa4.36□□□□□ -1.71
LRRTM4-201ENST00000409088 DBR1Q9UK59 544 aaKnown RBP4.36□□□□□ -1.71
LRRTM4-201ENST00000409088 PCDHA10Q9Y5I2 948 aa4.36□□□□□ -1.71
LRRTM4-201ENST00000409088 MYPNQ86TC9 1320 aa4.36□□□□□ -1.71
LRRTM4-201ENST00000409088 EIF3CLB5ME19 914 aaKnown RBP4.36□□□□□ -1.71
LRRTM4-201ENST00000409088 LYPLA2O95372 231 aa4.36□□□□□ -1.71
LRRTM4-201ENST00000409088 KCNA2P16389 499 aa4.36□□□□□ -1.71
LRRTM4-201ENST00000409088 PSMC2P35998 433 aaKnown RBP4.36□□□□□ -1.71
LRRTM4-201ENST00000409088 PEX3P56589 373 aa4.36□□□□□ -1.71
LRRTM4-201ENST00000409088 SPA17Q15506 151 aa4.36□□□□□ -1.71
LRRTM4-201ENST00000409088 ELF2Q15723 593 aa4.36□□□□□ -1.71
LRRTM4-201ENST00000409088 EXOC3L4Q17RC7 722 aa4.36□□□□□ -1.71
LRRTM4-201ENST00000409088 ERCC6LQ2NKX8 1250 aa4.36□□□□□ -1.71
LRRTM4-201ENST00000409088 GNPTABQ3T906 1256 aa4.36□□□□□ -1.71
LRRTM4-201ENST00000409088 FAM102BQ5T8I3 360 aa4.36□□□□□ -1.71
LRRTM4-201ENST00000409088 ZNF746Q6NUN9 644 aaPredicted RBP4.36□□□□□ -1.71
LRRTM4-201ENST00000409088 PDXDC1Q6P996 788 aa4.36□□□□□ -1.71
LRRTM4-201ENST00000409088 SEPT14Q6ZU15 432 aa4.36□□□□□ -1.71
LRRTM4-201ENST00000409088 ERO1BQ86YB8 467 aa4.36□□□□□ -1.71
LRRTM4-201ENST00000409088 ANKRD13AQ8IZ07 590 aa4.36□□□□□ -1.71
LRRTM4-201ENST00000409088 CHST13Q8NET6 341 aa4.36□□□□□ -1.71
LRRTM4-201ENST00000409088 EIF3CQ99613 913 aaKnown RBP4.36□□□□□ -1.71
LRRTM4-201ENST00000409088 LACRTQ9GZZ8 138 aa4.36□□□□□ -1.71
LRRTM4-201ENST00000409088 PCIF1Q9H4Z3 704 aa4.36□□□□□ -1.71
LRRTM4-201ENST00000409088 HAUS4Q9H6D7 363 aa4.36□□□□□ -1.71
LRRTM4-201ENST00000409088 CEP72Q9P209 647 aa4.36□□□□□ -1.71
LRRTM4-201ENST00000409088 ZMYM2Q9UBW7 1377 aa4.36□□□□□ -1.71
LRRTM4-201ENST00000409088 CTAGE9A4FU28 777 aa4.35□□□□□ -1.71
LRRTM4-201ENST00000409088 CCDC169A6NNP5 214 aa4.35□□□□□ -1.71
LRRTM4-201ENST00000409088 TISP43B9A030 160 aa4.35□□□□□ -1.71
LRRTM4-201ENST00000409088 SLC16A4O15374 487 aa4.35□□□□□ -1.71
LRRTM4-201ENST00000409088 KRT86O43790 486 aa4.35□□□□□ -1.71
LRRTM4-201ENST00000409088 ZNF862O60290 1169 aa4.35□□□□□ -1.71
LRRTM4-201ENST00000409088 EXOC3O60645 756 aa4.35□□□□□ -1.71
LRRTM4-201ENST00000409088 HNRNPH3P31942 346 aaKnown RBP4.35□□□□□ -1.71
LRRTM4-201ENST00000409088 SOX10P56693 466 aa4.35□□□□□ -1.71
LRRTM4-201ENST00000409088 CDK17Q00537 523 aa4.35□□□□□ -1.71
LRRTM4-201ENST00000409088 PPATQ06203 517 aa4.35□□□□□ -1.71
LRRTM4-201ENST00000409088 RAPGEF1Q13905 1077 aa4.35□□□□□ -1.71
LRRTM4-201ENST00000409088 STXBP2Q15833 593 aa4.35□□□□□ -1.71
LRRTM4-201ENST00000409088 GPR162Q16538 588 aa4.35□□□□□ -1.71
LRRTM4-201ENST00000409088 SFMBT2Q5VUG0 894 aa4.35□□□□□ -1.71
LRRTM4-201ENST00000409088 ANO5Q75V66 913 aa4.35□□□□□ -1.71
LRRTM4-201ENST00000409088 CYFIP1Q7L576 1253 aa4.35□□□□□ -1.71
LRRTM4-201ENST00000409088 SLC35C1Q96A29 364 aa4.35□□□□□ -1.71
LRRTM4-201ENST00000409088 JAKMIP2Q96AA8 810 aa4.35□□□□□ -1.71
LRRTM4-201ENST00000409088 CDHR1Q96JP9 859 aa4.35□□□□□ -1.71
LRRTM4-201ENST00000409088 CEP170P1Q96L14 293 aa4.35□□□□□ -1.71
LRRTM4-201ENST00000409088 EDEM3Q9BZQ6 932 aa4.35□□□□□ -1.71
LRRTM4-201ENST00000409088 SPATC1LQ9H0A9 340 aa4.35□□□□□ -1.71
LRRTM4-201ENST00000409088 JPH1Q9HDC5 661 aaPredicted RBP4.35□□□□□ -1.71
LRRTM4-201ENST00000409088 PRM3Q9NNZ6 103 aa4.35□□□□□ -1.71
LRRTM4-201ENST00000409088 AGPAT3Q9NRZ7 376 aa4.35□□□□□ -1.71
LRRTM4-201ENST00000409088 SLC9A2Q9UBY0 812 aa4.35□□□□□ -1.71
LRRTM4-201ENST00000409088 FRMD4BQ9Y2L6 1034 aa4.35□□□□□ -1.71
LRRTM4-201ENST00000409088 DUSP10Q9Y6W6 482 aa4.35□□□□□ -1.71
LRRTM4-201ENST00000409088 MACROD2A1Z1Q3 448 aa4.35□□□□□ -1.71
LRRTM4-201ENST00000409088 ZNF263O14978 683 aa4.35□□□□□ -1.71
LRRTM4-201ENST00000409088 SLC16A3O15427 465 aaKnown RBP4.35□□□□□ -1.71
LRRTM4-201ENST00000409088 EIF3JO75822 258 aaKnown RBP4.35□□□□□ -1.71
LRRTM4-201ENST00000409088 PSAPP07602 524 aa4.35□□□□□ -1.71
LRRTM4-201ENST00000409088 PLS3P13797 630 aa4.35□□□□□ -1.71
LRRTM4-201ENST00000409088 KIF11P52732 1056 aa4.35□□□□□ -1.71
LRRTM4-201ENST00000409088 ACTR2P61160 394 aa4.35□□□□□ -1.71
LRRTM4-201ENST00000409088 SP2Q02086 613 aa4.35□□□□□ -1.71
LRRTM4-201ENST00000409088 PPP2R3AQ06190 1150 aa4.35□□□□□ -1.71
LRRTM4-201ENST00000409088 KIF5AQ12840 1032 aa4.35□□□□□ -1.71
LRRTM4-201ENST00000409088 HSP90AA2PQ14568 343 aaPredicted RBP4.35□□□□□ -1.71
LRRTM4-201ENST00000409088 SLC9C1Q4G0N8 1177 aa4.35□□□□□ -1.71
LRRTM4-201ENST00000409088 WDR78Q5VTH9 848 aa4.35□□□□□ -1.71
LRRTM4-201ENST00000409088 GBP6Q6ZN66 633 aa4.35□□□□□ -1.71
LRRTM4-201ENST00000409088 USP50Q70EL3 339 aaPredicted RBP4.35□□□□□ -1.71
LRRTM4-201ENST00000409088 OTUD6AQ7L8S5 288 aa4.35□□□□□ -1.71
LRRTM4-201ENST00000409088 EEPD1Q7L9B9 569 aa4.35□□□□□ -1.71
LRRTM4-201ENST00000409088 HAUS6Q7Z4H7 955 aa4.35□□□□□ -1.71
LRRTM4-201ENST00000409088 CCDC60Q8IWA6 550 aaPredicted RBP4.35□□□□□ -1.71
LRRTM4-201ENST00000409088 PDCL2Q8N4E4 241 aa4.35□□□□□ -1.71
LRRTM4-201ENST00000409088 FAM133AQ8N9E0 248 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms