RNA–Protein interactions for RNA: ENST00000409076.6

SNX13-201, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 3,818 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-201ENST00000409076 STX2P32856 288 aa8.99□□□□□ -0.97
SNX13-201ENST00000409076 ZNF131P52739 623 aa8.99□□□□□ -0.97
SNX13-201ENST00000409076 IRX4P78413 519 aa8.99□□□□□ -0.97
SNX13-201ENST00000409076 MDH1BQ5I0G3 518 aa8.99□□□□□ -0.97
SNX13-201ENST00000409076 C16orf86Q6ZW13 317 aa8.99□□□□□ -0.97
SNX13-201ENST00000409076 CYFIP1Q7L576 1253 aa8.99□□□□□ -0.97
SNX13-201ENST00000409076 VSIG1Q86XK7 387 aa8.99□□□□□ -0.97
SNX13-201ENST00000409076 CCDC197Q8NCU1 140 aa8.99□□□□□ -0.97
SNX13-201ENST00000409076 TBC1D16Q8TBP0 767 aa8.99□□□□□ -0.97
SNX13-201ENST00000409076 ACER1Q8TDN7 264 aa8.99□□□□□ -0.97
SNX13-201ENST00000409076 CPA5Q8WXQ8 436 aa8.99□□□□□ -0.97
SNX13-201ENST00000409076 TEKT1Q969V4 418 aa8.99□□□□□ -0.97
SNX13-201ENST00000409076 TCHPQ9BT92 498 aa8.99□□□□□ -0.97
SNX13-201ENST00000409076 SPZ1Q9BXG8 430 aa8.99□□□□□ -0.97
SNX13-201ENST00000409076 ZBTB12Q9Y330 459 aaPredicted RBP8.99□□□□□ -0.97
SNX13-201ENST00000409076 PMS2P54278 862 aa8.99□□□□□ -0.97
SNX13-201ENST00000409076 PPATQ06203 517 aa8.99□□□□□ -0.97
SNX13-201ENST00000409076 ABCB5Q2M3G0 1257 aa8.99□□□□□ -0.97
SNX13-201ENST00000409076 ACCSLQ4AC99 568 aa8.99□□□□□ -0.97
SNX13-201ENST00000409076 SBK1Q52WX2 424 aa8.99□□□□□ -0.97
SNX13-201ENST00000409076 ARSHQ5FYA8 562 aa8.99□□□□□ -0.97
SNX13-201ENST00000409076 C10orf76Q5T2E6 689 aa8.99□□□□□ -0.97
SNX13-201ENST00000409076 PRAMEF18Q5VWM3 479 aa8.99□□□□□ -0.97
SNX13-201ENST00000409076 CCDC137Q6PK04 289 aaKnown RBP8.99□□□□□ -0.97
SNX13-201ENST00000409076 C4orf33Q8N1A6 199 aa8.99□□□□□ -0.97
SNX13-201ENST00000409076 LZTS2Q9BRK4 669 aa8.99□□□□□ -0.97
SNX13-201ENST00000409076 CBWD1Q9BRT8 395 aa8.99□□□□□ -0.97
SNX13-201ENST00000409076 ZNF577Q9BSK1 485 aa8.99□□□□□ -0.97
SNX13-201ENST00000409076 MTRF1LQ9UGC7 380 aaKnown RBP8.99□□□□□ -0.97
SNX13-201ENST00000409076 LEMD3Q9Y2U8 911 aa8.99□□□□□ -0.97
SNX13-201ENST00000409076 SLIT3O75094 1523 aa8.98□□□□□ -0.97
SNX13-201ENST00000409076 ANKRD63C9JTQ0 380 aa8.98□□□□□ -0.97
SNX13-201ENST00000409076 DNM1LO00429 736 aa8.98□□□□□ -0.97
SNX13-201ENST00000409076 COMTP21964 271 aa8.98□□□□□ -0.97
SNX13-201ENST00000409076 GIT2Q14161 759 aa8.98□□□□□ -0.97
SNX13-201ENST00000409076 ASPRV1Q53RT3 343 aa8.98□□□□□ -0.97
SNX13-201ENST00000409076 CDC42EP5Q6NZY7 148 aa8.98□□□□□ -0.97
SNX13-201ENST00000409076 SCARA5Q6ZMJ2 495 aa8.98□□□□□ -0.97
SNX13-201ENST00000409076 EEPD1Q7L9B9 569 aa8.98□□□□□ -0.97
SNX13-201ENST00000409076 SLF2Q8IX21 1173 aa8.98□□□□□ -0.97
SNX13-201ENST00000409076 ELOA2Q8IYF1 753 aaPredicted RBP8.98□□□□□ -0.97
SNX13-201ENST00000409076 NEK9Q8TD19 979 aa8.98□□□□□ -0.97
SNX13-201ENST00000409076 RBM17Q96I25 401 aaKnown RBP8.98□□□□□ -0.97
SNX13-201ENST00000409076 INTS2Q9H0H0 1204 aaKnown RBP8.98□□□□□ -0.97
SNX13-201ENST00000409076 C12orf65Q9H3J6 166 aaKnown RBP8.98□□□□□ -0.97
SNX13-201ENST00000409076 ABCF3Q9NUQ8 709 aa8.98□□□□□ -0.97
SNX13-201ENST00000409076 ANKFY1Q9P2R3 1169 aa8.98□□□□□ -0.97
SNX13-201ENST00000409076 RASAL2Q9UJF2 1139 aa8.98□□□□□ -0.97
SNX13-201ENST00000409076 DCTN4Q9UJW0 460 aa8.98□□□□□ -0.97
SNX13-201ENST00000409076 ZC3H4Q9UPT8 1303 aaKnown RBP8.98□□□□□ -0.97
SNX13-201ENST00000409076 RASGRF2O14827 1237 aa8.98□□□□□ -0.97
SNX13-201ENST00000409076 SGPL1O95470 568 aa8.98□□□□□ -0.97
SNX13-201ENST00000409076 RCAN1P53805 252 aa8.98□□□□□ -0.97
SNX13-201ENST00000409076 CDR2LQ86X02 465 aaPredicted RBP8.98□□□□□ -0.97
SNX13-201ENST00000409076 TRIM59Q8IWR1 403 aa8.98□□□□□ -0.97
SNX13-201ENST00000409076 LNX1Q8TBB1 728 aaPredicted RBP8.98□□□□□ -0.97
SNX13-201ENST00000409076 WHAMMQ8TF30 809 aa8.98□□□□□ -0.97
SNX13-201ENST00000409076 STAMBPL1Q96FJ0 436 aa8.98□□□□□ -0.97
SNX13-201ENST00000409076 AMNQ9BXJ7 453 aa8.98□□□□□ -0.97
SNX13-201ENST00000409076 TSKSQ9UJT2 592 aa8.98□□□□□ -0.97
SNX13-201ENST00000409076 SUGT1Q9Y2Z0 365 aa8.98□□□□□ -0.97
SNX13-201ENST00000409076 ALG6Q9Y672 507 aa8.98□□□□□ -0.97
SNX13-201ENST00000409076 COL4A1P02462 1669 aa8.98□□□□□ -0.97
SNX13-201ENST00000409076 HMGB1P1B2RPK0 211 aaPredicted RBP8.98□□□□□ -0.97
SNX13-201ENST00000409076 MSH4O15457 936 aa8.98□□□□□ -0.97
SNX13-201ENST00000409076 TNNI1P19237 187 aa8.98□□□□□ -0.97
SNX13-201ENST00000409076 PRPHP41219 470 aa8.98□□□□□ -0.97
SNX13-201ENST00000409076 NBPF20Q3BBV1 942 aa8.98□□□□□ -0.97
SNX13-201ENST00000409076 SGO2Q562F6 1265 aa8.98□□□□□ -0.97
SNX13-201ENST00000409076 XKR9Q5GH70 373 aa8.98□□□□□ -0.97
SNX13-201ENST00000409076 GALNT17Q6IS24 598 aa8.98□□□□□ -0.97
SNX13-201ENST00000409076 JAMLQ86YT9 394 aa8.98□□□□□ -0.97
SNX13-201ENST00000409076 ALG3Q92685 438 aa8.98□□□□□ -0.97
SNX13-201ENST00000409076 MTMR9Q96QG7 549 aa8.98□□□□□ -0.97
SNX13-201ENST00000409076 ENO4A6NNW6 628 aa8.97□□□□□ -0.97
SNX13-201ENST00000409076 NDUFB10O96000 172 aa8.97□□□□□ -0.97
SNX13-201ENST00000409076 GH1P01241 217 aa8.97□□□□□ -0.97
SNX13-201ENST00000409076 CCDC172P0C7W6 258 aa8.97□□□□□ -0.97
SNX13-201ENST00000409076 CHRNA5P30532 468 aa8.97□□□□□ -0.97
SNX13-201ENST00000409076 PSMC2P35998 433 aaKnown RBP8.97□□□□□ -0.97
SNX13-201ENST00000409076 ORC1Q13415 861 aa8.97□□□□□ -0.97
SNX13-201ENST00000409076 ANKMY2Q8IV38 441 aa8.97□□□□□ -0.97
SNX13-201ENST00000409076 ARHGEF19Q8IW93 802 aa8.97□□□□□ -0.97
SNX13-201ENST00000409076 CDAN1Q8IWY9 1227 aa8.97□□□□□ -0.97
SNX13-201ENST00000409076 PARP9Q8IXQ6 854 aa8.97□□□□□ -0.97
SNX13-201ENST00000409076 CERS5Q8N5B7 392 aa8.97□□□□□ -0.97
SNX13-201ENST00000409076 KLHL29Q96CT2 875 aa8.97□□□□□ -0.97
SNX13-201ENST00000409076 INPP4AQ96PE3 977 aaPredicted RBP8.97□□□□□ -0.97
SNX13-201ENST00000409076 TMBIM4Q9HC24 238 aa8.97□□□□□ -0.97
SNX13-201ENST00000409076 ANAPC7Q9UJX3 599 aa8.97□□□□□ -0.97
SNX13-201ENST00000409076 PNMA3Q9UL41 463 aa8.97□□□□□ -0.97
SNX13-201ENST00000409076 PPEF1O14829 653 aaPredicted RBP8.97□□□□□ -0.97
SNX13-201ENST00000409076 DIAPH2O60879 1101 aa8.97□□□□□ -0.97
SNX13-201ENST00000409076 BANF1O75531 89 aa8.97□□□□□ -0.97
SNX13-201ENST00000409076 ARP10275 920 aa8.97□□□□□ -0.97
SNX13-201ENST00000409076 PCP11498 1178 aaKnown RBP8.97□□□□□ -0.97
SNX13-201ENST00000409076 PAX7P23759 505 aa8.97□□□□□ -0.97
SNX13-201ENST00000409076 USP11P51784 963 aa8.97□□□□□ -0.97
SNX13-201ENST00000409076 CETN1Q12798 172 aa8.97□□□□□ -0.97
SNX13-201ENST00000409076 CYB5D1Q6P9G0 228 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms