RNA–Protein interactions for RNA: ENST00000406327.2

HMGB3P18-201, Transcript of high mobility group box 3 pseudogene 18, humanhuman

BASIC

Gene HMGB3P18, Length 590 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P18-201ENST00000406327 KCMF1Q9P0J7 381 aa5.99□□□□□ -1.45
HMGB3P18-201ENST00000406327 PRSS50Q9UI38 385 aa5.99□□□□□ -1.45
HMGB3P18-201ENST00000406327 WASF3Q9UPY6 502 aa5.99□□□□□ -1.45
HMGB3P18-201ENST00000406327 PTPN22Q9Y2R2 807 aa5.99□□□□□ -1.45
HMGB3P18-201ENST00000406327 MYO15BQ96JP2 1530 aa5.99□□□□□ -1.45
HMGB3P18-201ENST00000406327 CUTAO60888 179 aa5.98□□□□□ -1.45
HMGB3P18-201ENST00000406327 PCDH8O95206 1070 aa5.98□□□□□ -1.45
HMGB3P18-201ENST00000406327 LRG1P02750 347 aa5.98□□□□□ -1.45
HMGB3P18-201ENST00000406327 PDCP20941 246 aa5.98□□□□□ -1.45
HMGB3P18-201ENST00000406327 MC4RP32245 332 aa5.98□□□□□ -1.45
HMGB3P18-201ENST00000406327 PDE6BP35913 854 aa5.98□□□□□ -1.45
HMGB3P18-201ENST00000406327 RGS3P49796 1198 aa5.98□□□□□ -1.45
HMGB3P18-201ENST00000406327 FAM193AP78312 1265 aa5.98□□□□□ -1.45
HMGB3P18-201ENST00000406327 MORC3Q14149 939 aa5.98□□□□□ -1.45
HMGB3P18-201ENST00000406327 PGS1Q32NB8 556 aa5.98□□□□□ -1.45
HMGB3P18-201ENST00000406327 ZNF792Q3KQV3 632 aa5.98□□□□□ -1.45
HMGB3P18-201ENST00000406327 MUM1L1Q5H9M0 696 aa5.98□□□□□ -1.45
HMGB3P18-201ENST00000406327 PPP4R3AQ6IN85 833 aa5.98□□□□□ -1.45
HMGB3P18-201ENST00000406327 KLHDC10Q6PID8 442 aa5.98□□□□□ -1.45
HMGB3P18-201ENST00000406327 MIGA2Q7L4E1 593 aa5.98□□□□□ -1.45
HMGB3P18-201ENST00000406327 BMP8AQ7Z5Y6 402 aa5.98□□□□□ -1.45
HMGB3P18-201ENST00000406327 IRF2BP1Q8IU81 584 aa5.98□□□□□ -1.45
HMGB3P18-201ENST00000406327 GLB1L2Q8IW92 636 aa5.98□□□□□ -1.45
HMGB3P18-201ENST00000406327 TSPEARQ8WU66 669 aa5.98□□□□□ -1.45
HMGB3P18-201ENST00000406327 GAB3Q8WWW8 586 aa5.98□□□□□ -1.45
HMGB3P18-201ENST00000406327 HDAC10Q969S8 669 aa5.98□□□□□ -1.45
HMGB3P18-201ENST00000406327 KIRREL1Q96J84 757 aa5.98□□□□□ -1.45
HMGB3P18-201ENST00000406327 ADI1Q9BV57 179 aa5.98□□□□□ -1.45
HMGB3P18-201ENST00000406327 OR10A5Q9H207 317 aa5.98□□□□□ -1.45
HMGB3P18-201ENST00000406327 DLL4Q9NR61 685 aa5.98□□□□□ -1.45
HMGB3P18-201ENST00000406327 FTSJ1Q9UET6 329 aa5.98□□□□□ -1.45
HMGB3P18-201ENST00000406327 TUBD1Q9UJT1 453 aa5.98□□□□□ -1.45
HMGB3P18-201ENST00000406327 ADAMTS6Q9UKP5 1117 aa5.98□□□□□ -1.45
HMGB3P18-201ENST00000406327 TMPRSS11EQ9UL52 423 aa5.98□□□□□ -1.45
HMGB3P18-201ENST00000406327 NFIBO00712 420 aa5.97□□□□□ -1.45
HMGB3P18-201ENST00000406327 OPHN1O60890 802 aa5.97□□□□□ -1.45
HMGB3P18-201ENST00000406327 MPIG6BO95866 241 aa5.97□□□□□ -1.45
HMGB3P18-201ENST00000406327 RHCEP18577 417 aa5.97□□□□□ -1.45
HMGB3P18-201ENST00000406327 WASP42768 502 aa5.97□□□□□ -1.45
HMGB3P18-201ENST00000406327 CACNB3P54284 484 aa5.97□□□□□ -1.45
HMGB3P18-201ENST00000406327 GJA9P57773 515 aa5.97□□□□□ -1.45
HMGB3P18-201ENST00000406327 CDK17Q00537 523 aa5.97□□□□□ -1.45
HMGB3P18-201ENST00000406327 RHDQ02161 417 aa5.97□□□□□ -1.45
HMGB3P18-201ENST00000406327 ZNF267Q14586 743 aaPredicted RBP5.97□□□□□ -1.45
HMGB3P18-201ENST00000406327 THEMIS2Q5TEJ8 643 aa5.97□□□□□ -1.45
HMGB3P18-201ENST00000406327 TSHZ1Q6ZSZ6 1077 aa5.97□□□□□ -1.45
HMGB3P18-201ENST00000406327 CXXC5Q7LFL8 322 aaKnown RBP5.97□□□□□ -1.45
HMGB3P18-201ENST00000406327 PPM1NQ8N819 430 aa5.97□□□□□ -1.45
HMGB3P18-201ENST00000406327 ZBTB34Q8NCN2 500 aa5.97□□□□□ -1.45
HMGB3P18-201ENST00000406327 CPA5Q8WXQ8 436 aa5.97□□□□□ -1.45
HMGB3P18-201ENST00000406327 SLC39A13Q96H72 371 aa5.97□□□□□ -1.45
HMGB3P18-201ENST00000406327 TNIP3Q96KP6 325 aa5.97□□□□□ -1.45
HMGB3P18-201ENST00000406327 SLC2A13Q96QE2 648 aa5.97□□□□□ -1.45
HMGB3P18-201ENST00000406327 ACO2Q99798 780 aaKnown RBP5.97□□□□□ -1.45
HMGB3P18-201ENST00000406327 ELAC2Q9BQ52 826 aaKnown RBP5.97□□□□□ -1.45
HMGB3P18-201ENST00000406327 NOL10Q9BSC4 688 aaKnown RBP5.97□□□□□ -1.45
HMGB3P18-201ENST00000406327 TMEM60Q9H2L4 133 aa5.97□□□□□ -1.45
HMGB3P18-201ENST00000406327 SLC39A2Q9NP94 309 aa5.97□□□□□ -1.45
HMGB3P18-201ENST00000406327 KMT5AQ9NQR1 393 aa5.97□□□□□ -1.45
HMGB3P18-201ENST00000406327 CHST12Q9NRB3 414 aa5.97□□□□□ -1.45
HMGB3P18-201ENST00000406327 DDX20Q9UHI6 824 aaKnown RBP5.97□□□□□ -1.45
HMGB3P18-201ENST00000406327 A0A0A6YYJ9 748 aa5.96□□□□□ -1.46
HMGB3P18-201ENST00000406327 FAM171A2A8MVW0 826 aa5.96□□□□□ -1.46
HMGB3P18-201ENST00000406327 TPP1O14773 563 aa5.96□□□□□ -1.46
HMGB3P18-201ENST00000406327 HTR3AP46098 478 aa5.96□□□□□ -1.46
HMGB3P18-201ENST00000406327 YBX1P67809 324 aaKnown RBP5.96□□□□□ -1.46
HMGB3P18-201ENST00000406327 PFKPQ01813 784 aa5.96□□□□□ -1.46
HMGB3P18-201ENST00000406327 TRIM25Q14258 630 aaKnown RBP5.96□□□□□ -1.46
HMGB3P18-201ENST00000406327 NOLC1Q14978 699 aaKnown RBP eCLIP5.96□□□□□ -1.46
HMGB3P18-201ENST00000406327 TARBP2Q15633 366 aaKnown RBP5.96□□□□□ -1.46
HMGB3P18-201ENST00000406327 ADRM1Q16186 407 aa5.96□□□□□ -1.46
HMGB3P18-201ENST00000406327 IL31Q6EBC2 164 aa5.96□□□□□ -1.46
HMGB3P18-201ENST00000406327 LMBR1LQ6UX01 489 aa5.96□□□□□ -1.46
HMGB3P18-201ENST00000406327 BTNL9Q6UXG8 535 aa5.96□□□□□ -1.46
HMGB3P18-201ENST00000406327 NFXL1Q6ZNB6 911 aa5.96□□□□□ -1.46
HMGB3P18-201ENST00000406327 PRR18Q8N4B5 295 aa5.96□□□□□ -1.46
HMGB3P18-201ENST00000406327 MARCH10Q8NA82 808 aaPredicted RBP5.96□□□□□ -1.46
HMGB3P18-201ENST00000406327 STRBPQ96SI9 672 aaKnown RBP5.96□□□□□ -1.46
HMGB3P18-201ENST00000406327 GREM2Q9H772 168 aa5.96□□□□□ -1.46
HMGB3P18-201ENST00000406327 KLHL14Q9P2G3 628 aa5.96□□□□□ -1.46
HMGB3P18-201ENST00000406327 USP18Q9UMW8 372 aa5.96□□□□□ -1.46
HMGB3P18-201ENST00000406327 DNM3Q9UQ16 869 aa5.96□□□□□ -1.46
HMGB3P18-201ENST00000406327 FAM50BQ9Y247 325 aa5.96□□□□□ -1.46
HMGB3P18-201ENST00000406327 CFAP20Q9Y6A4 193 aaKnown RBP5.96□□□□□ -1.46
HMGB3P18-201ENST00000406327 IFRD1O00458 451 aaPredicted RBP5.95□□□□□ -1.46
HMGB3P18-201ENST00000406327 ADAMTS4O75173 837 aa5.95□□□□□ -1.46
HMGB3P18-201ENST00000406327 CYP7B1O75881 506 aa5.95□□□□□ -1.46
HMGB3P18-201ENST00000406327 NCAM1P13591 858 aa5.95□□□□□ -1.46
HMGB3P18-201ENST00000406327 STAT5AP42229 794 aa5.95□□□□□ -1.46
HMGB3P18-201ENST00000406327 GALK1P51570 392 aa5.95□□□□□ -1.46
HMGB3P18-201ENST00000406327 NEK3P51956 506 aa5.95□□□□□ -1.46
HMGB3P18-201ENST00000406327 USP14P54578 494 aa5.95□□□□□ -1.46
HMGB3P18-201ENST00000406327 MEF2AQ02078 507 aaPredicted RBP5.95□□□□□ -1.46
HMGB3P18-201ENST00000406327 ZRSR2Q15696 482 aaKnown RBP5.95□□□□□ -1.46
HMGB3P18-201ENST00000406327 MAN2A1Q16706 1144 aa5.95□□□□□ -1.46
HMGB3P18-201ENST00000406327 DGKDQ16760 1214 aa5.95□□□□□ -1.46
HMGB3P18-201ENST00000406327 CR1LQ2VPA4 569 aa5.95□□□□□ -1.46
HMGB3P18-201ENST00000406327 DARS2Q6PI48 645 aaKnown RBP5.95□□□□□ -1.46
HMGB3P18-201ENST00000406327 UNQ6494/PRO21346Q6UXR6 183 aa5.95□□□□□ -1.46
HMGB3P18-201ENST00000406327 CD300LDQ6UXZ3 194 aa5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms