RNA–Protein interactions for RNA: ENST00000405240.5

RTN4-209, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,061 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-209ENST00000405240 PCYOX1Q9UHG3 505 aa4.2□□□□□ -1.74
RTN4-209ENST00000405240 PPP1R9AQ9ULJ8 1098 aa4.2□□□□□ -1.74
RTN4-209ENST00000405240 ESYT3A0FGR9 886 aa4.2□□□□□ -1.74
RTN4-209ENST00000405240 ANKRD62A6NC57 917 aa4.2□□□□□ -1.74
RTN4-209ENST00000405240 FAM187AA6NFU0 413 aa4.2□□□□□ -1.74
RTN4-209ENST00000405240 FAM196BA6NMK8 535 aa4.2□□□□□ -1.74
RTN4-209ENST00000405240 KCNK3O14649 394 aa4.2□□□□□ -1.74
RTN4-209ENST00000405240 ITGA4P13612 1032 aa4.2□□□□□ -1.74
RTN4-209ENST00000405240 CHRNB2P17787 502 aa4.2□□□□□ -1.74
RTN4-209ENST00000405240 ERCC3P19447 782 aa4.2□□□□□ -1.74
RTN4-209ENST00000405240 FLT3P36888 993 aa4.2□□□□□ -1.74
RTN4-209ENST00000405240 NCKAP1LP55160 1127 aa4.2□□□□□ -1.74
RTN4-209ENST00000405240 NAP1L1P55209 391 aaKnown RBP4.2□□□□□ -1.74
RTN4-209ENST00000405240 SNAP25P60880 206 aa4.2□□□□□ -1.74
RTN4-209ENST00000405240 BYSLQ13895 437 aaKnown RBP4.2□□□□□ -1.74
RTN4-209ENST00000405240 DRAP1Q14919 205 aaPredicted RBP4.2□□□□□ -1.74
RTN4-209ENST00000405240 SIX1Q15475 284 aaPredicted RBP4.2□□□□□ -1.74
RTN4-209ENST00000405240 CEP55Q53EZ4 464 aa4.2□□□□□ -1.74
RTN4-209ENST00000405240 ZC2HC1CQ53FD0 456 aaPredicted RBP4.2□□□□□ -1.74
RTN4-209ENST00000405240 CFAP58Q5T655 872 aa4.2□□□□□ -1.74
RTN4-209ENST00000405240 RBM26Q5T8P6 1007 aaKnown RBP4.2□□□□□ -1.74
RTN4-209ENST00000405240 ZDHHC24Q6UX98 284 aa4.2□□□□□ -1.74
RTN4-209ENST00000405240 MORC4Q8TE76 937 aa4.2□□□□□ -1.74
RTN4-209ENST00000405240 PPM1EQ8WY54 764 aa4.2□□□□□ -1.74
RTN4-209ENST00000405240 MXRA8Q9BRK3 442 aa4.2□□□□□ -1.74
RTN4-209ENST00000405240 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP4.2□□□□□ -1.74
RTN4-209ENST00000405240 TIPINQ9BVW5 301 aa4.2□□□□□ -1.74
RTN4-209ENST00000405240 WDR11Q9BZH6 1224 aa4.2□□□□□ -1.74
RTN4-209ENST00000405240 FAM129AQ9BZQ8 928 aa4.2□□□□□ -1.74
RTN4-209ENST00000405240 IKZF4Q9H2S9 585 aa4.2□□□□□ -1.74
RTN4-209ENST00000405240 FAM114A2Q9NRY5 505 aa4.2□□□□□ -1.74
RTN4-209ENST00000405240 NOCTQ9UK39 431 aaKnown RBP4.2□□□□□ -1.74
RTN4-209ENST00000405240 DNAJC12Q9UKB3 198 aa4.2□□□□□ -1.74
RTN4-209ENST00000405240 PLAAQ9Y263 795 aa4.2□□□□□ -1.74
RTN4-209ENST00000405240 COQ4Q9Y3A0 265 aa4.2□□□□□ -1.74
RTN4-209ENST00000405240 UBIAD1Q9Y5Z9 338 aa4.2□□□□□ -1.74
RTN4-209ENST00000405240 SSC5DA1L4H1 1573 aa4.19□□□□□ -1.74
RTN4-209ENST00000405240 A0A0U1RQG5 324 aaPredicted RBP4.19□□□□□ -1.74
RTN4-209ENST00000405240 ZBTB39O15060 712 aa4.19□□□□□ -1.74
RTN4-209ENST00000405240 BUB1BO60566 1050 aaPredicted RBP4.19□□□□□ -1.74
RTN4-209ENST00000405240 GCNT3O95395 438 aa4.19□□□□□ -1.74
RTN4-209ENST00000405240 GGPS1O95749 300 aa4.19□□□□□ -1.74
RTN4-209ENST00000405240 GH2P01242 217 aa4.19□□□□□ -1.74
RTN4-209ENST00000405240 SSBP05455 408 aaKnown RBP eCLIP4.19□□□□□ -1.74
RTN4-209ENST00000405240 NR1D1P20393 614 aa4.19□□□□□ -1.74
RTN4-209ENST00000405240 HOXA13P31271 388 aaPredicted RBP4.19□□□□□ -1.74
RTN4-209ENST00000405240 MATR3P43243 847 aaKnown RBP eCLIP4.19□□□□□ -1.742e-7■■□□□ 13.8
RTN4-209ENST00000405240 STAT2P52630 851 aa4.19□□□□□ -1.74
RTN4-209ENST00000405240 CACNB3P54284 484 aa4.19□□□□□ -1.74
RTN4-209ENST00000405240 BFSP1Q12934 665 aa4.19□□□□□ -1.74
RTN4-209ENST00000405240 MTMR3Q13615 1198 aa4.19□□□□□ -1.74
RTN4-209ENST00000405240 GRIPAP1Q4V328 841 aa4.19□□□□□ -1.74
RTN4-209ENST00000405240 SMYD5Q6GMV2 418 aa4.19□□□□□ -1.74
RTN4-209ENST00000405240 TADA2BQ86TJ2 420 aa4.19□□□□□ -1.74
RTN4-209ENST00000405240 FAM160B2Q86V87 743 aa4.19□□□□□ -1.74
RTN4-209ENST00000405240 CNPY4Q8N129 248 aa4.19□□□□□ -1.74
RTN4-209ENST00000405240 PLEKHO2Q8TD55 490 aa4.19□□□□□ -1.74
RTN4-209ENST00000405240 FAM151AQ8WW52 585 aa4.19□□□□□ -1.74
RTN4-209ENST00000405240 CLEC4DQ8WXI8 215 aa4.19□□□□□ -1.74
RTN4-209ENST00000405240 LRRC45Q96CN5 670 aa4.19□□□□□ -1.74
RTN4-209ENST00000405240 ARHGEF26Q96DR7 871 aa4.19□□□□□ -1.74
RTN4-209ENST00000405240 PRMT6Q96LA8 375 aaPredicted RBP4.19□□□□□ -1.74
RTN4-209ENST00000405240 SENP7Q9BQF6 1050 aa4.19□□□□□ -1.74
RTN4-209ENST00000405240 DBNDD1Q9H9R9 158 aa4.19□□□□□ -1.74
RTN4-209ENST00000405240 NR2E1Q9Y466 385 aa4.19□□□□□ -1.74
RTN4-209ENST00000405240 FAM169AQ9Y6X4 670 aa4.19□□□□□ -1.74
RTN4-209ENST00000405240 ZSWIM8A7E2V4 1837 aa4.19□□□□□ -1.74
RTN4-209ENST00000405240 ANK1P16157 1881 aa4.19□□□□□ -1.74
RTN4-209ENST00000405240 GCOM1H8Y6P7 765 aaPredicted RBP4.19□□□□□ -1.74
RTN4-209ENST00000405240 CLIC2O15247 247 aa4.19□□□□□ -1.74
RTN4-209ENST00000405240 TP73O15350 636 aa4.19□□□□□ -1.74
RTN4-209ENST00000405240 TRAPPC3O43617 180 aa4.19□□□□□ -1.74
RTN4-209ENST00000405240 MARCH6O60337 910 aa4.19□□□□□ -1.74
RTN4-209ENST00000405240 GRIN3BO60391 1043 aa4.19□□□□□ -1.74
RTN4-209ENST00000405240 TBCAO75347 108 aaKnown RBP4.19□□□□□ -1.74
RTN4-209ENST00000405240 GDF11O95390 407 aa4.19□□□□□ -1.74
RTN4-209ENST00000405240 FAM107AO95990 144 aa4.19□□□□□ -1.74
RTN4-209ENST00000405240 CYP1A2P05177 515 aa4.19□□□□□ -1.74
RTN4-209ENST00000405240 KRT18P05783 430 aaKnown RBP4.19□□□□□ -1.74
RTN4-209ENST00000405240 POLR2MP0CAP2 368 aa4.19□□□□□ -1.74
RTN4-209ENST00000405240 ARP10275 920 aa4.19□□□□□ -1.74
RTN4-209ENST00000405240 GZMAP12544 262 aa4.19□□□□□ -1.74
RTN4-209ENST00000405240 TAL1P17542 331 aaPredicted RBP4.19□□□□□ -1.74
RTN4-209ENST00000405240 DHX34Q14147 1143 aaKnown RBP4.19□□□□□ -1.74
RTN4-209ENST00000405240 PLCB4Q15147 1175 aa4.19□□□□□ -1.74
RTN4-209ENST00000405240 SPDYE2Q495Y8 402 aa4.19□□□□□ -1.74
RTN4-209ENST00000405240 LRCH2Q5VUJ6 765 aa4.19□□□□□ -1.74
RTN4-209ENST00000405240 VPS36Q86VN1 386 aa4.19□□□□□ -1.74
RTN4-209ENST00000405240 FAM71AQ8IYT1 594 aa4.19□□□□□ -1.74
RTN4-209ENST00000405240 ZDHHC14Q8IZN3 488 aa4.19□□□□□ -1.74
RTN4-209ENST00000405240 SH2D3CQ8N5H7 860 aa4.19□□□□□ -1.74
RTN4-209ENST00000405240 PRPF38AQ8NAV1 312 aaKnown RBP4.19□□□□□ -1.74
RTN4-209ENST00000405240 TAF4BQ92750 862 aa4.19□□□□□ -1.74
RTN4-209ENST00000405240 FBXL18Q96ME1 805 aa4.19□□□□□ -1.74
RTN4-209ENST00000405240 SPAG5Q96R06 1193 aa4.19□□□□□ -1.74
RTN4-209ENST00000405240 AGPAT1Q99943 283 aa4.19□□□□□ -1.74
RTN4-209ENST00000405240 HINFPQ9BQA5 517 aa4.19□□□□□ -1.74
RTN4-209ENST00000405240 VPS33BQ9H267 617 aa4.19□□□□□ -1.74
RTN4-209ENST00000405240 CCDC134Q9H6E4 229 aa4.19□□□□□ -1.74
RTN4-209ENST00000405240 LRRC4CQ9HCJ2 640 aa4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms