RNA–Protein interactions for RNA: ENST00000404484.8

TPM1-208, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-208ENST00000404484 MTIF2P46199 727 aaKnown RBP23.1■■□□□ 1.29
TPM1-208ENST00000404484 SMTNP53814 917 aa23.1■■□□□ 1.29
TPM1-208ENST00000404484 POLGP54098 1239 aaPredicted RBP23.1■■□□□ 1.29
TPM1-208ENST00000404484 DMP1Q13316 513 aaPredicted RBP23.1■■□□□ 1.29
TPM1-208ENST00000404484 LRRC55Q6ZSA7 311 aa23.1■■□□□ 1.29
TPM1-208ENST00000404484 CCDC186Q7Z3E2 898 aa23.1■■□□□ 1.29
TPM1-208ENST00000404484 FILIP1Q7Z7B0 1213 aa23.1■■□□□ 1.29
TPM1-208ENST00000404484 ZC3H3Q8IXZ2 948 aaKnown RBP23.1■■□□□ 1.29
TPM1-208ENST00000404484 BBXQ8WY36 941 aaPredicted RBP23.1■■□□□ 1.29
TPM1-208ENST00000404484 POLD4Q9HCU8 107 aa23.1■■□□□ 1.29
TPM1-208ENST00000404484 INTS13Q9NVM9 706 aa23.1■■□□□ 1.29
TPM1-208ENST00000404484 DNM1LO00429 736 aa23.1■■□□□ 1.29
TPM1-208ENST00000404484 CETN3O15182 167 aa23.1■■□□□ 1.29
TPM1-208ENST00000404484 MYCNP04198 464 aaPredicted RBP23.1■■□□□ 1.29
TPM1-208ENST00000404484 RPL13P26373 211 aaKnown RBP23.1■■□□□ 1.29
TPM1-208ENST00000404484 PPTC7Q8NI37 304 aa23.1■■□□□ 1.29
TPM1-208ENST00000404484 SLC7A3Q8WY07 619 aa23.1■■□□□ 1.29
TPM1-208ENST00000404484 DPF3Q92784 378 aa23.1■■□□□ 1.29
TPM1-208ENST00000404484 COPS5Q92905 334 aa23.1■■□□□ 1.29
TPM1-208ENST00000404484 HVCN1Q96D96 273 aa23.1■■□□□ 1.29
TPM1-208ENST00000404484 SH2D3AQ9BRG2 576 aa23.1■■□□□ 1.29
TPM1-208ENST00000404484 HTATIP2Q9BUP3 242 aa23.1■■□□□ 1.29
TPM1-208ENST00000404484 PDLIM7Q9NR12 457 aa23.1■■□□□ 1.29
TPM1-208ENST00000404484 TAB2Q9NYJ8 693 aa23.1■■□□□ 1.29
TPM1-208ENST00000404484 C11orf97A0A1B0GVM6 126 aaPredicted RBP23.09■■□□□ 1.29
TPM1-208ENST00000404484 H0YCG3 227 aa23.09■■□□□ 1.29
TPM1-208ENST00000404484 DUSP11O75319 330 aaKnown RBP23.09■■□□□ 1.29
TPM1-208ENST00000404484 PPP1R37O75864 691 aa23.09■■□□□ 1.29
TPM1-208ENST00000404484 SCP2P22307 547 aa23.09■■□□□ 1.29
TPM1-208ENST00000404484 ADCYAP1R1P41586 468 aa23.09■■□□□ 1.29
TPM1-208ENST00000404484 EMC2Q15006 297 aa23.09■■□□□ 1.29
TPM1-208ENST00000404484 NFIL3Q16649 462 aa23.09■■□□□ 1.29
TPM1-208ENST00000404484 DUSP28Q4G0W2 176 aa23.09■■□□□ 1.29
TPM1-208ENST00000404484 SPECC1LQ69YQ0 1117 aa23.09■■□□□ 1.29
TPM1-208ENST00000404484 HS2ST1Q7LGA3 356 aa23.09■■□□□ 1.29
TPM1-208ENST00000404484 ATP8B4Q8TF62 1192 aa23.09■■□□□ 1.29
TPM1-208ENST00000404484 SPIRE2Q8WWL2 714 aa23.09■■□□□ 1.29
TPM1-208ENST00000404484 TUBGCP2Q9BSJ2 902 aa23.09■■□□□ 1.29
TPM1-208ENST00000404484 STRA6Q9BX79 667 aa23.09■■□□□ 1.29
TPM1-208ENST00000404484 TMEM206Q9H813 350 aa23.09■■□□□ 1.29
TPM1-208ENST00000404484 FRMPD3Q5JV73 1810 aa23.08■■□□□ 1.29
TPM1-208ENST00000404484 LGALS16A8MUM7 142 aa23.08■■□□□ 1.29
TPM1-208ENST00000404484 CCDC150Q8NCX0 1101 aa23.08■■□□□ 1.29
TPM1-208ENST00000404484 IFT74Q96LB3 600 aa23.08■■□□□ 1.29
TPM1-208ENST00000404484 SENP6Q9GZR1 1112 aaPredicted RBP23.08■■□□□ 1.29
TPM1-208ENST00000404484 VPS16Q9H269 839 aa23.08■■□□□ 1.29
TPM1-208ENST00000404484 DHX33Q9H6R0 707 aaKnown RBP23.08■■□□□ 1.29
TPM1-208ENST00000404484 CGNQ9P2M7 1197 aaKnown RBP23.08■■□□□ 1.29
TPM1-208ENST00000404484 GAS2O43903 313 aaKnown RBP23.07■■□□□ 1.28
TPM1-208ENST00000404484 ADAMTS4O75173 837 aa23.07■■□□□ 1.28
TPM1-208ENST00000404484 PRKCSHP14314 528 aaPredicted RBP23.07■■□□□ 1.28
TPM1-208ENST00000404484 PTGS1P23219 599 aa23.07■■□□□ 1.28
TPM1-208ENST00000404484 HOXD13P35453 343 aa23.07■■□□□ 1.28
TPM1-208ENST00000404484 NCKAP1LP55160 1127 aa23.07■■□□□ 1.28
TPM1-208ENST00000404484 PEX3P56589 373 aa23.07■■□□□ 1.28
TPM1-208ENST00000404484 TNFAIP2Q03169 654 aa23.07■■□□□ 1.28
TPM1-208ENST00000404484 TARBP2Q15633 366 aaKnown RBP23.07■■□□□ 1.28
TPM1-208ENST00000404484 TMEM63BQ5T3F8 832 aa23.07■■□□□ 1.28
TPM1-208ENST00000404484 ZSCAN30Q86W11 494 aa23.07■■□□□ 1.28
TPM1-208ENST00000404484 ACCSQ96QU6 501 aa23.07■■□□□ 1.28
TPM1-208ENST00000404484 GPRC5CQ9NQ84 441 aa23.07■■□□□ 1.28
TPM1-208ENST00000404484 ITIH6Q6UXX5 1313 aa23.07■■□□□ 1.28
TPM1-208ENST00000404484 NR2F2P24468 414 aa23.06■■□□□ 1.28
TPM1-208ENST00000404484 DNM2P50570 870 aa23.06■■□□□ 1.28
TPM1-208ENST00000404484 SNRPFP62306 86 aaKnown RBP23.06■■□□□ 1.28
TPM1-208ENST00000404484 IRX5P78411 483 aaPredicted RBP23.06■■□□□ 1.28
TPM1-208ENST00000404484 ADAM9Q13443 819 aa23.06■■□□□ 1.28
TPM1-208ENST00000404484 SYCP3Q8IZU3 236 aa23.06■■□□□ 1.28
TPM1-208ENST00000404484 JPH2Q9BR39 696 aaPredicted RBP23.06■■□□□ 1.28
TPM1-208ENST00000404484 GBP3Q9H0R5 595 aa23.06■■□□□ 1.28
TPM1-208ENST00000404484 XPNPEP1Q9NQW7 623 aa23.06■■□□□ 1.28
TPM1-208ENST00000404484 ERAP1Q9NZ08 941 aa23.06■■□□□ 1.28
TPM1-208ENST00000404484 GNEQ9Y223 722 aaKnown RBP23.06■■□□□ 1.28
TPM1-208ENST00000404484 ZKSCAN5Q9Y2L8 839 aa23.06■■□□□ 1.28
TPM1-208ENST00000404484 KBTBD13C9JR72 458 aa23.06■■□□□ 1.28
TPM1-208ENST00000404484 SMPD1P17405 629 aa23.06■■□□□ 1.28
TPM1-208ENST00000404484 MARSP56192 900 aaKnown RBP23.06■■□□□ 1.28
TPM1-208ENST00000404484 GTF2BQ00403 316 aa23.06■■□□□ 1.28
TPM1-208ENST00000404484 PPP2R5AQ15172 486 aa23.06■■□□□ 1.28
TPM1-208ENST00000404484 MAN2A1Q16706 1144 aa23.06■■□□□ 1.28
TPM1-208ENST00000404484 CCDC40Q4G0X9 1142 aa23.06■■□□□ 1.28
TPM1-208ENST00000404484 ZC2HC1CQ53FD0 456 aaPredicted RBP23.06■■□□□ 1.28
TPM1-208ENST00000404484 RNF180Q86T96 592 aa23.06■■□□□ 1.28
TPM1-208ENST00000404484 NTPCRQ9BSD7 190 aaKnown RBP23.06■■□□□ 1.28
TPM1-208ENST00000404484 NOC4LQ9BVI4 516 aaKnown RBP23.06■■□□□ 1.28
TPM1-208ENST00000404484 KMT5AQ9NQR1 393 aa23.06■■□□□ 1.28
TPM1-208ENST00000404484 EXOC7Q9UPT5 735 aa23.06■■□□□ 1.28
TPM1-208ENST00000404484 MYADML2A6NDP7 307 aa23.05■■□□□ 1.28
TPM1-208ENST00000404484 CCDC169A6NNP5 214 aa23.05■■□□□ 1.28
TPM1-208ENST00000404484 PES1O00541 588 aaKnown RBP23.05■■□□□ 1.28
TPM1-208ENST00000404484 SLC16A3O15427 465 aaKnown RBP23.05■■□□□ 1.28
TPM1-208ENST00000404484 TEX33O43247 280 aa23.05■■□□□ 1.28
TPM1-208ENST00000404484 HBP1O60381 514 aa23.05■■□□□ 1.28
TPM1-208ENST00000404484 PPFIA4O75335 1185 aa23.05■■□□□ 1.28
TPM1-208ENST00000404484 NR3C1P04150 777 aa23.05■■□□□ 1.28
TPM1-208ENST00000404484 PBX1P40424 430 aa23.05■■□□□ 1.28
TPM1-208ENST00000404484 NPTX2P47972 431 aa23.05■■□□□ 1.28
TPM1-208ENST00000404484 UBXN1Q04323 297 aa23.05■■□□□ 1.28
TPM1-208ENST00000404484 MYBPC2Q14324 1141 aa23.05■■□□□ 1.28
TPM1-208ENST00000404484 HAUS6Q7Z4H7 955 aa23.05■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms