RNA–Protein interactions for RNA: ENST00000399903.6

PTPRA-205, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5 BASIC

Gene PTPRA, Length 3,337 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-205ENST00000399903 PECAM1P16284 738 aaPredicted RBP18.44■□□□□ 0.54
PTPRA-205ENST00000399903 CHRNA5P30532 468 aa18.44■□□□□ 0.54
PTPRA-205ENST00000399903 UNC13DQ70J99 1090 aa18.44■□□□□ 0.54
PTPRA-205ENST00000399903 ACTRT1Q8TDG2 376 aa18.44■□□□□ 0.54
PTPRA-205ENST00000399903 RAB17Q9H0T7 212 aa18.44■□□□□ 0.54
PTPRA-205ENST00000399903 RASGRF2O14827 1237 aa18.44■□□□□ 0.54
PTPRA-205ENST00000399903 SNX3O60493 162 aa18.44■□□□□ 0.54
PTPRA-205ENST00000399903 PPP1R2P41236 205 aa18.44■□□□□ 0.54
PTPRA-205ENST00000399903 GJB7Q6PEY0 223 aa18.44■□□□□ 0.54
PTPRA-205ENST00000399903 SEPT14Q6ZU15 432 aa18.44■□□□□ 0.54
PTPRA-205ENST00000399903 VSIG1Q86XK7 387 aa18.44■□□□□ 0.54
PTPRA-205ENST00000399903 TPCN2Q8NHX9 752 aa18.44■□□□□ 0.54
PTPRA-205ENST00000399903 TBCKQ8TEA7 893 aa18.44■□□□□ 0.54
PTPRA-205ENST00000399903 NUDT12Q9BQG2 462 aa18.44■□□□□ 0.54
PTPRA-205ENST00000399903 FGFBP2Q9BYJ0 223 aa18.44■□□□□ 0.54
PTPRA-205ENST00000399903 AMFRQ9UKV5 643 aa18.44■□□□□ 0.54
PTPRA-205ENST00000399903 H2AFZP0C0S5 128 aa18.43■□□□□ 0.54
PTPRA-205ENST00000399903 RIPK1Q13546 671 aa18.43■□□□□ 0.54
PTPRA-205ENST00000399903 BLMHQ13867 455 aa18.43■□□□□ 0.54
PTPRA-205ENST00000399903 TNIP1Q15025 636 aa18.43■□□□□ 0.54
PTPRA-205ENST00000399903 NONOQ15233 471 aaKnown RBP eCLIP18.43■□□□□ 0.54
PTPRA-205ENST00000399903 TTBK2Q6IQ55 1244 aa18.43■□□□□ 0.54
PTPRA-205ENST00000399903 ZNF449Q6P9G9 518 aa18.43■□□□□ 0.54
PTPRA-205ENST00000399903 H2AFVQ71UI9 128 aa18.43■□□□□ 0.54
PTPRA-205ENST00000399903 GUF1Q8N442 669 aaKnown RBP18.43■□□□□ 0.54
PTPRA-205ENST00000399903 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP18.43■□□□□ 0.541e-6■■■■■ 44.1
PTPRA-205ENST00000399903 TMEM237Q96Q45 408 aa18.43■□□□□ 0.54
PTPRA-205ENST00000399903 NKX1-2Q9UD57 310 aaPredicted RBP18.43■□□□□ 0.54
PTPRA-205ENST00000399903 SMCO2A6NFE2 343 aa18.43■□□□□ 0.54
PTPRA-205ENST00000399903 STXBP3O00186 592 aa18.43■□□□□ 0.54
PTPRA-205ENST00000399903 RGL2O15211 777 aa18.43■□□□□ 0.54
PTPRA-205ENST00000399903 PLCG2P16885 1265 aa18.43■□□□□ 0.54
PTPRA-205ENST00000399903 PAPOLAP51003 745 aaKnown RBP18.43■□□□□ 0.54
PTPRA-205ENST00000399903 NUCKS1Q9H1E3 243 aaKnown RBP18.43■□□□□ 0.54
PTPRA-205ENST00000399903 CUEDC2Q9H467 287 aa18.43■□□□□ 0.54
PTPRA-205ENST00000399903 COL24A1Q17RW2 1714 aa18.43■□□□□ 0.54
PTPRA-205ENST00000399903 NPHP3-ACAD11A0A0J9YXS1 232 aa18.43■□□□□ 0.54
PTPRA-205ENST00000399903 LRRC63Q05C16 580 aa18.43■□□□□ 0.54
PTPRA-205ENST00000399903 C16orf86Q6ZW13 317 aa18.43■□□□□ 0.54
PTPRA-205ENST00000399903 KCNK18Q7Z418 384 aa18.43■□□□□ 0.54
PTPRA-205ENST00000399903 TEKT4Q8WW24 435 aa18.43■□□□□ 0.54
PTPRA-205ENST00000399903 ADAM7Q9H2U9 754 aa18.43■□□□□ 0.54
PTPRA-205ENST00000399903 NAGPAQ9UK23 515 aa18.43■□□□□ 0.54
PTPRA-205ENST00000399903 TUBP50607 506 aa18.42■□□□□ 0.54
PTPRA-205ENST00000399903 ADAM9Q13443 819 aa18.42■□□□□ 0.54
PTPRA-205ENST00000399903 HERC4Q5GLZ8 1057 aaPredicted RBP18.42■□□□□ 0.54
PTPRA-205ENST00000399903 LMNTD2Q8IXW0 634 aa18.42■□□□□ 0.54
PTPRA-205ENST00000399903 MMTAG2Q9BU76 263 aaKnown RBP18.42■□□□□ 0.54
PTPRA-205ENST00000399903 PABPC3Q9H361 631 aaKnown RBP18.42■□□□□ 0.54
PTPRA-205ENST00000399903 ERVK-5Q9HDB9 667 aa18.42■□□□□ 0.54
PTPRA-205ENST00000399903 CHORDC1Q9UHD1 332 aaPredicted RBP18.42■□□□□ 0.54
PTPRA-205ENST00000399903 RBAK-RBAKDNI3L0D1 243 aa18.42■□□□□ 0.54
PTPRA-205ENST00000399903 LUC7L3O95232 432 aaKnown RBP18.42■□□□□ 0.54
PTPRA-205ENST00000399903 TAL1P17542 331 aaPredicted RBP18.42■□□□□ 0.54
PTPRA-205ENST00000399903 MMP13P45452 471 aa18.42■□□□□ 0.54
PTPRA-205ENST00000399903 KCNH2Q12809 1159 aa18.42■□□□□ 0.54
PTPRA-205ENST00000399903 KCTD1Q719H9 257 aa18.42■□□□□ 0.54
PTPRA-205ENST00000399903 FITM2Q8N6M3 262 aa18.42■□□□□ 0.54
PTPRA-205ENST00000399903 PALM3A6NDB9 673 aaPredicted RBP18.41■□□□□ 0.54
PTPRA-205ENST00000399903 GFPT2O94808 682 aa18.41■□□□□ 0.54
PTPRA-205ENST00000399903 SNAP25P60880 206 aa18.41■□□□□ 0.54
PTPRA-205ENST00000399903 SEMA3FQ13275 785 aa18.41■□□□□ 0.54
PTPRA-205ENST00000399903 GRB10Q13322 594 aa18.41■□□□□ 0.54
PTPRA-205ENST00000399903 SLC27A3Q5K4L6 730 aa18.41■□□□□ 0.54
PTPRA-205ENST00000399903 SLITRK6Q9H5Y7 841 aa18.41■□□□□ 0.54
PTPRA-205ENST00000399903 BLOC1S4Q9NUP1 217 aa18.41■□□□□ 0.54
PTPRA-205ENST00000399903 CCDC88AQ3V6T2 1871 aa18.41■□□□□ 0.54
PTPRA-205ENST00000399903 MAP3K13O43283 966 aa18.41■□□□□ 0.54
PTPRA-205ENST00000399903 FLOT1O75955 427 aa18.41■□□□□ 0.54
PTPRA-205ENST00000399903 SLMAPQ14BN4 828 aa18.41■□□□□ 0.54
PTPRA-205ENST00000399903 CALCRLQ16602 461 aa18.41■□□□□ 0.54
PTPRA-205ENST00000399903 FAM26FQ5R3K3 315 aa18.41■□□□□ 0.54
PTPRA-205ENST00000399903 C18orf8Q96DM3 657 aa18.41■□□□□ 0.54
PTPRA-205ENST00000399903 RMDN2Q96LZ7 410 aa18.41■□□□□ 0.54
PTPRA-205ENST00000399903 DLGAP2Q9P1A6 1054 aa18.41■□□□□ 0.54
PTPRA-205ENST00000399903 SNED1Q8TER0 1413 aa18.41■□□□□ 0.54
PTPRA-205ENST00000399903 TMEM120BA0PK00 339 aa18.41■□□□□ 0.54
PTPRA-205ENST00000399903 ICA1Q05084 483 aa18.41■□□□□ 0.54
PTPRA-205ENST00000399903 TMEM154Q6P9G4 183 aa18.41■□□□□ 0.54
PTPRA-205ENST00000399903 NEK8Q86SG6 692 aa18.41■□□□□ 0.54
PTPRA-205ENST00000399903 MYH1P12882 1939 aa18.41■□□□□ 0.54
PTPRA-205ENST00000399903 GH1P01241 217 aa18.4■□□□□ 0.54
PTPRA-205ENST00000399903 HOXA10P31260 410 aaPredicted RBP18.4■□□□□ 0.54
PTPRA-205ENST00000399903 GBP1P32455 592 aa18.4■□□□□ 0.54
PTPRA-205ENST00000399903 RANBP1P43487 201 aa18.4■□□□□ 0.54
PTPRA-205ENST00000399903 KRT79Q5XKE5 535 aa18.4■□□□□ 0.54
PTPRA-205ENST00000399903 SAMD1Q6SPF0 538 aaPredicted RBP18.4■□□□□ 0.54
PTPRA-205ENST00000399903 VPS36Q86VN1 386 aa18.4■□□□□ 0.54
PTPRA-205ENST00000399903 NEDD1Q8NHV4 660 aa18.4■□□□□ 0.54
PTPRA-205ENST00000399903 ERP44Q9BS26 406 aa18.4■□□□□ 0.54
PTPRA-205ENST00000399903 ERFP50548 548 aa18.4■□□□□ 0.54
PTPRA-205ENST00000399903 RAB27AP51159 221 aa18.4■□□□□ 0.54
PTPRA-205ENST00000399903 INTS8Q75QN2 995 aaKnown RBP18.4■□□□□ 0.54
PTPRA-205ENST00000399903 SPATA21Q7Z572 469 aa18.4■□□□□ 0.54
PTPRA-205ENST00000399903 ARHGEF2Q92974 986 aaKnown RBP18.4■□□□□ 0.54
PTPRA-205ENST00000399903 AK8Q96MA6 479 aa18.4■□□□□ 0.54
PTPRA-205ENST00000399903 TRIM7Q9C029 511 aa18.4■□□□□ 0.54
PTPRA-205ENST00000399903 HOMER3Q9NSC5 361 aa18.4■□□□□ 0.54
PTPRA-205ENST00000399903 BARHL2Q9NY43 387 aa18.4■□□□□ 0.54
PTPRA-205ENST00000399903 KLHL14Q9P2G3 628 aa18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms