RNA–Protein interactions for RNA: ENST00000399264.1

CCDC144A-205, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 2

Gene CCDC144A, Length 2,815 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-205ENST00000399264 UBAP2Q5T6F2 1119 aaKnown RBP15.78■□□□□ 0.12
CCDC144A-205ENST00000399264 FAM84AQ96KN4 292 aa15.78■□□□□ 0.12
CCDC144A-205ENST00000399264 ATP6V1G3Q96LB4 118 aa15.78■□□□□ 0.12
CCDC144A-205ENST00000399264 SYT11Q9BT88 431 aa15.78■□□□□ 0.12
CCDC144A-205ENST00000399264 STK33Q9BYT3 514 aa15.78■□□□□ 0.12
CCDC144A-205ENST00000399264 COL20A1Q9P218 1284 aa15.78■□□□□ 0.12
CCDC144A-205ENST00000399264 SLC26A4O43511 780 aa15.77■□□□□ 0.12
CCDC144A-205ENST00000399264 RAD17O75943 681 aa15.77■□□□□ 0.12
CCDC144A-205ENST00000399264 GAP43P17677 238 aa15.77■□□□□ 0.12
CCDC144A-205ENST00000399264 TMOD1P28289 359 aa15.77■□□□□ 0.12
CCDC144A-205ENST00000399264 PPP2R5CQ13362 524 aa15.77■□□□□ 0.12
CCDC144A-205ENST00000399264 GRIPAP1Q4V328 841 aa15.77■□□□□ 0.12
CCDC144A-205ENST00000399264 VPS36Q86VN1 386 aa15.77■□□□□ 0.12
CCDC144A-205ENST00000399264 ARHGEF19Q8IW93 802 aa15.77■□□□□ 0.12
CCDC144A-205ENST00000399264 SYCP3Q8IZU3 236 aa15.77■□□□□ 0.12
CCDC144A-205ENST00000399264 UBLCP1Q8WVY7 318 aaPredicted RBP15.77■□□□□ 0.12
CCDC144A-205ENST00000399264 AKT1S1Q96B36 256 aa15.77■□□□□ 0.12
CCDC144A-205ENST00000399264 CBWD1Q9BRT8 395 aa15.77■□□□□ 0.12
CCDC144A-205ENST00000399264 MRIQ9BWK5 157 aa15.77■□□□□ 0.12
CCDC144A-205ENST00000399264 DMAC2Q9NW81 257 aa15.77■□□□□ 0.12
CCDC144A-205ENST00000399264 SUCLA2Q9P2R7 463 aaPredicted RBP15.77■□□□□ 0.12
CCDC144A-205ENST00000399264 DDX3YO15523 660 aaKnown RBP15.77■□□□□ 0.11
CCDC144A-205ENST00000399264 GCLMP48507 274 aa15.77■□□□□ 0.11
CCDC144A-205ENST00000399264 PPP3CAQ08209 521 aa15.77■□□□□ 0.11
CCDC144A-205ENST00000399264 ZNF844Q08AG5 666 aa15.77■□□□□ 0.11
CCDC144A-205ENST00000399264 WDR11Q9BZH6 1224 aa15.77■□□□□ 0.11
CCDC144A-205ENST00000399264 TMEM39BQ9GZU3 492 aa15.77■□□□□ 0.11
CCDC144A-205ENST00000399264 TUFT1Q9NNX1 390 aa15.77■□□□□ 0.11
CCDC144A-205ENST00000399264 TMEM110-MUSTN1A8MSY1 372 aa15.76■□□□□ 0.11
CCDC144A-205ENST00000399264 MYO1FO00160 1098 aa15.76■□□□□ 0.11
CCDC144A-205ENST00000399264 IPO5O00410 1097 aaKnown RBP15.76■□□□□ 0.11
CCDC144A-205ENST00000399264 ATMINO43313 823 aaPredicted RBP15.76■□□□□ 0.11
CCDC144A-205ENST00000399264 CTNNA1P35221 906 aaKnown RBP15.76■□□□□ 0.11
CCDC144A-205ENST00000399264 ITGB3BPQ13352 177 aaPredicted RBP15.76■□□□□ 0.11
CCDC144A-205ENST00000399264 KDM7AQ6ZMT4 941 aa15.76■□□□□ 0.11
CCDC144A-205ENST00000399264 HS2ST1Q7LGA3 356 aa15.76■□□□□ 0.11
CCDC144A-205ENST00000399264 MICALL1Q8N3F8 863 aa15.76■□□□□ 0.11
CCDC144A-205ENST00000399264 LMO3Q8TAP4 145 aa15.76■□□□□ 0.11
CCDC144A-205ENST00000399264 PLEKHO2Q8TD55 490 aa15.76■□□□□ 0.11
CCDC144A-205ENST00000399264 UBE2TQ9NPD8 197 aaPredicted RBP15.76■□□□□ 0.11
CCDC144A-205ENST00000399264 APEX2Q9UBZ4 518 aa15.76■□□□□ 0.11
CCDC144A-205ENST00000399264 AMFRQ9UKV5 643 aa15.76■□□□□ 0.11
CCDC144A-205ENST00000399264 FRMD4BQ9Y2L6 1034 aa15.76■□□□□ 0.11
CCDC144A-205ENST00000399264 FRMPD4Q14CM0 1322 aa15.76■□□□□ 0.11
CCDC144A-205ENST00000399264 GTPBP10A4D1E9 387 aaKnown RBP15.76■□□□□ 0.11
CCDC144A-205ENST00000399264 EIF3DO15371 548 aaKnown RBP eCLIP15.76■□□□□ 0.11
CCDC144A-205ENST00000399264 HDLBPQ00341 1268 aaKnown RBP15.76■□□□□ 0.11
CCDC144A-205ENST00000399264 PPATQ06203 517 aa15.76■□□□□ 0.11
CCDC144A-205ENST00000399264 IFI16Q16666 785 aaKnown RBP15.76■□□□□ 0.11
CCDC144A-205ENST00000399264 CC2D2BQ6DHV5 1058 aa15.76■□□□□ 0.11
CCDC144A-205ENST00000399264 RASGEF1CQ8N431 466 aa15.76■□□□□ 0.11
CCDC144A-205ENST00000399264 KRT35Q92764 455 aa15.76■□□□□ 0.11
CCDC144A-205ENST00000399264 KAT2BQ92831 832 aa15.76■□□□□ 0.11
CCDC144A-205ENST00000399264 TMBIM4Q9HC24 238 aa15.76■□□□□ 0.11
CCDC144A-205ENST00000399264 PPANQ9NQ55 473 aaKnown RBP15.76■□□□□ 0.11
CCDC144A-205ENST00000399264 GPRC5CQ9NQ84 441 aa15.76■□□□□ 0.11
CCDC144A-205ENST00000399264 EMSYQ7Z589 1322 aa15.76■□□□□ 0.11
CCDC144A-205ENST00000399264 GOLGA8IPA6NC78 632 aa15.76■□□□□ 0.11
CCDC144A-205ENST00000399264 GOLGA8JA6NMD2 632 aa15.76■□□□□ 0.11
CCDC144A-205ENST00000399264 H0YIN7 160 aa15.76■□□□□ 0.11
CCDC144A-205ENST00000399264 CALCAP01258 141 aa15.76■□□□□ 0.11
CCDC144A-205ENST00000399264 USP8P40818 1118 aa15.76■□□□□ 0.11
CCDC144A-205ENST00000399264 ZNF131P52739 623 aa15.76■□□□□ 0.11
CCDC144A-205ENST00000399264 MYL7Q01449 175 aa15.76■□□□□ 0.11
CCDC144A-205ENST00000399264 SLC15A2Q16348 729 aa15.76■□□□□ 0.11
CCDC144A-205ENST00000399264 LDHDQ86WU2 507 aa15.76■□□□□ 0.11
CCDC144A-205ENST00000399264 NACC1Q96RE7 527 aa15.76■□□□□ 0.11
CCDC144A-205ENST00000399264 TSPYL1Q9H0U9 437 aa15.76■□□□□ 0.11
CCDC144A-205ENST00000399264 VEZTQ9HBM0 779 aa15.76■□□□□ 0.11
CCDC144A-205ENST00000399264 CNOT8Q9UFF9 292 aaKnown RBP15.76■□□□□ 0.11
CCDC144A-205ENST00000399264 TMX2Q9Y320 296 aa15.76■□□□□ 0.11
CCDC144A-205ENST00000399264 ATRNL1Q5VV63 1379 aa15.75■□□□□ 0.11
CCDC144A-205ENST00000399264 NFIBO00712 420 aa15.75■□□□□ 0.11
CCDC144A-205ENST00000399264 C21orf2O43822 256 aa15.75■□□□□ 0.11
CCDC144A-205ENST00000399264 APBA3O96018 575 aa15.75■□□□□ 0.11
CCDC144A-205ENST00000399264 VIL1P09327 827 aaKnown RBP15.75■□□□□ 0.11
CCDC144A-205ENST00000399264 POU5F1Q01860 360 aaKnown RBP15.75■□□□□ 0.11
CCDC144A-205ENST00000399264 BFSP1Q12934 665 aa15.75■□□□□ 0.11
CCDC144A-205ENST00000399264 SPP2Q13103 211 aa15.75■□□□□ 0.11
CCDC144A-205ENST00000399264 ZDHHC14Q8IZN3 488 aa15.75■□□□□ 0.11
CCDC144A-205ENST00000399264 HOMER2Q9NSB8 354 aa15.75■□□□□ 0.11
CCDC144A-205ENST00000399264 BRWD3Q6RI45 1802 aa15.75■□□□□ 0.11
CCDC144A-205ENST00000399264 ARHGEF35A5YM69 484 aa15.75■□□□□ 0.11
CCDC144A-205ENST00000399264 K7ENM7 598 aa15.75■□□□□ 0.11
CCDC144A-205ENST00000399264 CES2O00748 559 aa15.75■□□□□ 0.11
CCDC144A-205ENST00000399264 TNFAIP3P21580 790 aa15.75■□□□□ 0.11
CCDC144A-205ENST00000399264 DHX9Q08211 1270 aaKnown RBP15.75■□□□□ 0.11
CCDC144A-205ENST00000399264 PADI6Q6TGC4 694 aa15.75■□□□□ 0.11
CCDC144A-205ENST00000399264 CD302Q8IX05 232 aa15.75■□□□□ 0.11
CCDC144A-205ENST00000399264 CTNNBL1Q8WYA6 563 aaPredicted RBP15.75■□□□□ 0.11
CCDC144A-205ENST00000399264 RFFLQ8WZ73 363 aa15.75■□□□□ 0.11
CCDC144A-205ENST00000399264 BTBD6Q96KE9 485 aa15.75■□□□□ 0.11
CCDC144A-205ENST00000399264 KIF13BQ9NQT8 1826 aa15.75■□□□□ 0.11
CCDC144A-205ENST00000399264 BHMG1C9JSJ3 638 aaPredicted RBP15.74■□□□□ 0.11
CCDC144A-205ENST00000399264 PPIP5K2O43314 1243 aa15.74■□□□□ 0.11
CCDC144A-205ENST00000399264 PPP1R12BO60237 982 aaPredicted RBP15.74■□□□□ 0.11
CCDC144A-205ENST00000399264 ENTPD3O75355 529 aa15.74■□□□□ 0.11
CCDC144A-205ENST00000399264 INPP5BP32019 993 aa15.74■□□□□ 0.11
CCDC144A-205ENST00000399264 SLC20A2Q08357 652 aa15.74■□□□□ 0.11
CCDC144A-205ENST00000399264 SF3A3Q12874 501 aaKnown RBP eCLIP15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms