RNA–Protein interactions for RNA: ENST00000399082.7

HLA-DQB1-203, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-203ENST00000399082 CXCL10P02778 98 aa13.76□□□□□ -0.21
HLA-DQB1-203ENST00000399082 RPLP2P05387 115 aaKnown RBP13.76□□□□□ -0.21
HLA-DQB1-203ENST00000399082 SLFN14P0C7P3 912 aa13.76□□□□□ -0.21
HLA-DQB1-203ENST00000399082 GHRP10912 638 aa13.76□□□□□ -0.21
HLA-DQB1-203ENST00000399082 MAGEA10P43363 369 aaPredicted RBP13.76□□□□□ -0.21
HLA-DQB1-203ENST00000399082 ZNF131P52739 623 aa13.76□□□□□ -0.21
HLA-DQB1-203ENST00000399082 LPIN1Q14693 890 aa13.76□□□□□ -0.21
HLA-DQB1-203ENST00000399082 CSPP1Q1MSJ5 1256 aa13.76□□□□□ -0.21
HLA-DQB1-203ENST00000399082 SV2BQ7L1I2 683 aa13.76□□□□□ -0.21
HLA-DQB1-203ENST00000399082 C16orf59Q7L2K0 433 aa13.76□□□□□ -0.21
HLA-DQB1-203ENST00000399082 TCP11Q8WWU5 503 aa13.76□□□□□ -0.21
HLA-DQB1-203ENST00000399082 DDX12PQ92771 950 aa13.76□□□□□ -0.21
HLA-DQB1-203ENST00000399082 NLRP4Q96MN2 994 aa13.76□□□□□ -0.21
HLA-DQB1-203ENST00000399082 TRIM9Q9C026 710 aa13.76□□□□□ -0.21
HLA-DQB1-203ENST00000399082 TNMDQ9H2S6 317 aa13.76□□□□□ -0.21
HLA-DQB1-203ENST00000399082 MINDY3Q9H8M7 445 aa13.76□□□□□ -0.21
HLA-DQB1-203ENST00000399082 IFT122Q9HBG6 1241 aa13.76□□□□□ -0.21
HLA-DQB1-203ENST00000399082 SFI1A8K8P3 1242 aa13.75□□□□□ -0.21
HLA-DQB1-203ENST00000399082 CSDE1O75534 798 aaKnown RBP13.75□□□□□ -0.21
HLA-DQB1-203ENST00000399082 PRR29P0C7W0 189 aa13.75□□□□□ -0.21
HLA-DQB1-203ENST00000399082 DARSP14868 501 aaKnown RBP13.75□□□□□ -0.21
HLA-DQB1-203ENST00000399082 DNM2P50570 870 aa13.75□□□□□ -0.21
HLA-DQB1-203ENST00000399082 CRYBB1P53674 252 aaPredicted RBP13.75□□□□□ -0.21
HLA-DQB1-203ENST00000399082 UBE2HP62256 183 aa13.75□□□□□ -0.21
HLA-DQB1-203ENST00000399082 MDM2Q00987 491 aaPredicted RBP13.75□□□□□ -0.21
HLA-DQB1-203ENST00000399082 FAM160A1Q05DH4 1040 aa13.75□□□□□ -0.21
HLA-DQB1-203ENST00000399082 KRBA2Q6ZNG9 492 aa13.75□□□□□ -0.21
HLA-DQB1-203ENST00000399082 DYMQ7RTS9 669 aa13.75□□□□□ -0.21
HLA-DQB1-203ENST00000399082 FAM228AQ86W67 206 aa13.75□□□□□ -0.21
HLA-DQB1-203ENST00000399082 IFNLR1Q8IU57 520 aaPredicted RBP13.75□□□□□ -0.21
HLA-DQB1-203ENST00000399082 PAGE5Q96GU1 130 aa13.75□□□□□ -0.21
HLA-DQB1-203ENST00000399082 GBP4Q96PP9 640 aa13.75□□□□□ -0.21
HLA-DQB1-203ENST00000399082 FIZ1Q96SL8 496 aa13.75□□□□□ -0.21
HLA-DQB1-203ENST00000399082 KIFC3Q9BVG8 833 aa13.75□□□□□ -0.21
HLA-DQB1-203ENST00000399082 TIPINQ9BVW5 301 aa13.75□□□□□ -0.21
HLA-DQB1-203ENST00000399082 MAGEF1Q9HAY2 307 aa13.75□□□□□ -0.21
HLA-DQB1-203ENST00000399082 ERVK-5Q9HDB9 667 aa13.75□□□□□ -0.21
HLA-DQB1-203ENST00000399082 PRKAG2Q9UGJ0 569 aa13.75□□□□□ -0.21
HLA-DQB1-203ENST00000399082 GINS2Q9Y248 185 aa13.75□□□□□ -0.21
HLA-DQB1-203ENST00000399082 NOC2LQ9Y3T9 749 aaKnown RBP13.75□□□□□ -0.21
HLA-DQB1-203ENST00000399082 FRMD3A2A2Y4 597 aa13.74□□□□□ -0.21
HLA-DQB1-203ENST00000399082 GOLGA6L4A6NEF3 574 aa13.74□□□□□ -0.21
HLA-DQB1-203ENST00000399082 EDN1P05305 212 aa13.74□□□□□ -0.21
HLA-DQB1-203ENST00000399082 SRGAP2CP0DJJ0 459 aa13.74□□□□□ -0.21
HLA-DQB1-203ENST00000399082 ACRP10323 421 aa13.74□□□□□ -0.21
HLA-DQB1-203ENST00000399082 FGFR4P22455 802 aa13.74□□□□□ -0.21
HLA-DQB1-203ENST00000399082 AFMP43652 599 aa13.74□□□□□ -0.21
HLA-DQB1-203ENST00000399082 PTENP60484 403 aa13.74□□□□□ -0.21
HLA-DQB1-203ENST00000399082 FPGSQ05932 587 aa13.74□□□□□ -0.21
HLA-DQB1-203ENST00000399082 MXD4Q14582 209 aaPredicted RBP13.74□□□□□ -0.21
HLA-DQB1-203ENST00000399082 CDCA2Q69YH5 1023 aaPredicted RBP13.74□□□□□ -0.21
HLA-DQB1-203ENST00000399082 CNNM4Q6P4Q7 775 aa13.74□□□□□ -0.21
HLA-DQB1-203ENST00000399082 TSHZ1Q6ZSZ6 1077 aa13.74□□□□□ -0.21
HLA-DQB1-203ENST00000399082 DEFB128Q7Z7B8 93 aa13.74□□□□□ -0.21
HLA-DQB1-203ENST00000399082 ZNF410Q86VK4 478 aa13.74□□□□□ -0.21
HLA-DQB1-203ENST00000399082 TMEM199Q8N511 208 aa13.74□□□□□ -0.21
HLA-DQB1-203ENST00000399082 RNF149Q8NC42 400 aa13.74□□□□□ -0.21
HLA-DQB1-203ENST00000399082 NLRP7Q8WX94 980 aa13.74□□□□□ -0.21
HLA-DQB1-203ENST00000399082 KIFAP3Q92845 792 aa13.74□□□□□ -0.21
HLA-DQB1-203ENST00000399082 DRC1Q96MC2 740 aa13.74□□□□□ -0.21
HLA-DQB1-203ENST00000399082 GDF15Q99988 308 aa13.74□□□□□ -0.21
HLA-DQB1-203ENST00000399082 C7orf25Q9BPX7 421 aa13.74□□□□□ -0.21
HLA-DQB1-203ENST00000399082 PYM1Q9BRP8 204 aaKnown RBP13.74□□□□□ -0.21
HLA-DQB1-203ENST00000399082 USP25Q9UHP3 1055 aa13.74□□□□□ -0.21
HLA-DQB1-203ENST00000399082 ODF2LQ9ULJ1 636 aa13.74□□□□□ -0.21
HLA-DQB1-203ENST00000399082 M0QZ92 97 aa13.73□□□□□ -0.21
HLA-DQB1-203ENST00000399082 ASAP2O43150 1006 aa13.73□□□□□ -0.21
HLA-DQB1-203ENST00000399082 KLRC4O43908 158 aa13.73□□□□□ -0.21
HLA-DQB1-203ENST00000399082 PLS3P13797 630 aa13.73□□□□□ -0.21
HLA-DQB1-203ENST00000399082 EIF4BP23588 611 aaKnown RBP13.73□□□□□ -0.21
HLA-DQB1-203ENST00000399082 CD52P31358 61 aa13.73□□□□□ -0.21
HLA-DQB1-203ENST00000399082 RFC2P35250 354 aa13.73□□□□□ -0.21
HLA-DQB1-203ENST00000399082 NAMPTP43490 491 aa13.73□□□□□ -0.21
HLA-DQB1-203ENST00000399082 NPTX2P47972 431 aa13.73□□□□□ -0.21
HLA-DQB1-203ENST00000399082 PEX3P56589 373 aa13.73□□□□□ -0.21
HLA-DQB1-203ENST00000399082 POU5F1BQ06416 359 aa13.73□□□□□ -0.21
HLA-DQB1-203ENST00000399082 CUL4BQ13620 913 aa13.73□□□□□ -0.21
HLA-DQB1-203ENST00000399082 AMHR2Q16671 573 aa13.73□□□□□ -0.21
HLA-DQB1-203ENST00000399082 PLEKHG4Q58EX7 1191 aa13.73□□□□□ -0.21
HLA-DQB1-203ENST00000399082 TAS1R3Q7RTX0 852 aa13.73□□□□□ -0.21
HLA-DQB1-203ENST00000399082 DBF4BQ8NFT6 615 aa13.73□□□□□ -0.21
HLA-DQB1-203ENST00000399082 LINC01599Q8WXQ3 324 aa13.73□□□□□ -0.21
HLA-DQB1-203ENST00000399082 NFKBIZQ9BYH8 718 aa13.73□□□□□ -0.21
HLA-DQB1-203ENST00000399082 FGFBP2Q9BYJ0 223 aa13.73□□□□□ -0.21
HLA-DQB1-203ENST00000399082 CCDC113Q9H0I3 377 aa13.73□□□□□ -0.21
HLA-DQB1-203ENST00000399082 BLZF1Q9H2G9 400 aa13.73□□□□□ -0.21
HLA-DQB1-203ENST00000399082 TMX1Q9H3N1 280 aa13.73□□□□□ -0.21
HLA-DQB1-203ENST00000399082 IL23AQ9NPF7 189 aa13.73□□□□□ -0.21
HLA-DQB1-203ENST00000399082 SQORQ9Y6N5 450 aa13.73□□□□□ -0.21
HLA-DQB1-203ENST00000399082 MICAL3Q7RTP6 2002 aa13.73□□□□□ -0.21
HLA-DQB1-203ENST00000399082 PTPRSQ13332 1948 aa13.72□□□□□ -0.21
HLA-DQB1-203ENST00000399082 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.72□□□□□ -0.21
HLA-DQB1-203ENST00000399082 LRRIQ4A6NIV6 560 aa13.72□□□□□ -0.21
HLA-DQB1-203ENST00000399082 TTLL13PA6NNM8 815 aa13.72□□□□□ -0.21
HLA-DQB1-203ENST00000399082 MGEA5O60502 916 aa13.72□□□□□ -0.21
HLA-DQB1-203ENST00000399082 PARNO95453 639 aaKnown RBP13.72□□□□□ -0.21
HLA-DQB1-203ENST00000399082 MBTD1Q05BQ5 628 aa13.72□□□□□ -0.21
HLA-DQB1-203ENST00000399082 EHHADHQ08426 723 aa13.72□□□□□ -0.21
HLA-DQB1-203ENST00000399082 PPIGQ13427 754 aaKnown RBP eCLIP13.72□□□□□ -0.21
HLA-DQB1-203ENST00000399082 TMEM240Q5SV17 173 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms