RNA–Protein interactions for RNA: ENST00000399079.7

HLA-DQB1-202, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,501 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-202ENST00000399079 KRT79Q5XKE5 535 aa15.68■□□□□ 0.1
HLA-DQB1-202ENST00000399079 ARL6IP4Q66PJ3 421 aaKnown RBP15.68■□□□□ 0.1
HLA-DQB1-202ENST00000399079 NPAS4Q8IUM7 802 aa15.68■□□□□ 0.1
HLA-DQB1-202ENST00000399079 RNF149Q8NC42 400 aa15.68■□□□□ 0.1
HLA-DQB1-202ENST00000399079 ASAP3Q8TDY4 903 aa15.68■□□□□ 0.1
HLA-DQB1-202ENST00000399079 ZNF689Q96CS4 500 aaPredicted RBP15.68■□□□□ 0.1
HLA-DQB1-202ENST00000399079 TGS1Q96RS0 853 aaKnown RBP15.68■□□□□ 0.1
HLA-DQB1-202ENST00000399079 GAS2L1Q99501 681 aaPredicted RBP15.68■□□□□ 0.1
HLA-DQB1-202ENST00000399079 POLD4Q9HCU8 107 aa15.68■□□□□ 0.1
HLA-DQB1-202ENST00000399079 CLIC4Q9Y696 253 aa15.68■□□□□ 0.1
HLA-DQB1-202ENST00000399079 A0A0C4DFX4 3053 aa15.67■□□□□ 0.1
HLA-DQB1-202ENST00000399079 XIRP2A4UGR9 3374 aa15.67■□□□□ 0.1
HLA-DQB1-202ENST00000399079 SPTBN5Q9NRC6 3674 aaKnown RBP15.67■□□□□ 0.1
HLA-DQB1-202ENST00000399079 ZSCAN20P17040 1043 aaPredicted RBP15.67■□□□□ 0.1
HLA-DQB1-202ENST00000399079 ARL2P36404 184 aa15.67■□□□□ 0.1
HLA-DQB1-202ENST00000399079 ERVK-21P61565 698 aa15.67■□□□□ 0.1
HLA-DQB1-202ENST00000399079 GRIN1Q05586 938 aa15.67■□□□□ 0.1
HLA-DQB1-202ENST00000399079 ZRSR1Q15695 479 aaKnown RBP15.67■□□□□ 0.1
HLA-DQB1-202ENST00000399079 PADI6Q6TGC4 694 aa15.67■□□□□ 0.1
HLA-DQB1-202ENST00000399079 BHMT2Q9H2M3 363 aa15.67■□□□□ 0.1
HLA-DQB1-202ENST00000399079 C1orf112Q9NSG2 853 aa15.67■□□□□ 0.1
HLA-DQB1-202ENST00000399079 LRFN2Q9ULH4 789 aa15.67■□□□□ 0.1
HLA-DQB1-202ENST00000399079 PCDHB7Q9Y5E2 793 aa15.67■□□□□ 0.1
HLA-DQB1-202ENST00000399079 ARHGEF35A5YM69 484 aa15.66■□□□□ 0.1
HLA-DQB1-202ENST00000399079 E9PMD0 336 aa15.66■□□□□ 0.1
HLA-DQB1-202ENST00000399079 STAG3L1P0CL83 205 aa15.66■□□□□ 0.1
HLA-DQB1-202ENST00000399079 MUTP22033 750 aa15.66■□□□□ 0.1
HLA-DQB1-202ENST00000399079 SFPQP23246 707 aaKnown RBP eCLIP15.66■□□□□ 0.1
HLA-DQB1-202ENST00000399079 GLRA2P23416 452 aa15.66■□□□□ 0.1
HLA-DQB1-202ENST00000399079 CEBPZQ03701 1054 aaKnown RBP15.66■□□□□ 0.1
HLA-DQB1-202ENST00000399079 MXD4Q14582 209 aaPredicted RBP15.66■□□□□ 0.1
HLA-DQB1-202ENST00000399079 PAN2Q504Q3 1202 aaKnown RBP15.66■□□□□ 0.1
HLA-DQB1-202ENST00000399079 FAM102BQ5T8I3 360 aa15.66■□□□□ 0.1
HLA-DQB1-202ENST00000399079 CATSPER4Q7RTX7 472 aa15.66■□□□□ 0.1
HLA-DQB1-202ENST00000399079 KCNK18Q7Z418 384 aa15.66■□□□□ 0.1
HLA-DQB1-202ENST00000399079 MAFAQ8NHW3 353 aaPredicted RBP15.66■□□□□ 0.1
HLA-DQB1-202ENST00000399079 PLIN2Q99541 437 aa15.66■□□□□ 0.1
HLA-DQB1-202ENST00000399079 INO80BQ9C086 356 aaPredicted RBP15.66■□□□□ 0.1
HLA-DQB1-202ENST00000399079 POLR3FQ9H1D9 316 aaPredicted RBP15.66■□□□□ 0.1
HLA-DQB1-202ENST00000399079 ADGRA3Q8IWK6 1321 aa15.66■□□□□ 0.1
HLA-DQB1-202ENST00000399079 COL4A6Q14031 1691 aa15.66■□□□□ 0.1
HLA-DQB1-202ENST00000399079 ASAP2O43150 1006 aa15.65■□□□□ 0.1
HLA-DQB1-202ENST00000399079 LPXNO60711 386 aa15.65■□□□□ 0.1
HLA-DQB1-202ENST00000399079 FGFR1P11362 822 aa15.65■□□□□ 0.1
HLA-DQB1-202ENST00000399079 FAM189BP81408 668 aa15.65■□□□□ 0.1
HLA-DQB1-202ENST00000399079 CAPSQ13938 189 aa15.65■□□□□ 0.1
HLA-DQB1-202ENST00000399079 BTG3Q14201 252 aaPredicted RBP15.65■□□□□ 0.1
HLA-DQB1-202ENST00000399079 FOXD4L5Q5VV16 416 aaPredicted RBP15.65■□□□□ 0.1
HLA-DQB1-202ENST00000399079 FIBCD1Q8N539 461 aa15.65■□□□□ 0.1
HLA-DQB1-202ENST00000399079 GDPD5Q8WTR4 605 aa15.65■□□□□ 0.1
HLA-DQB1-202ENST00000399079 FOXD4L4Q8WXT5 416 aaPredicted RBP15.65■□□□□ 0.1
HLA-DQB1-202ENST00000399079 PIN4Q9Y237 131 aaKnown RBP15.65■□□□□ 0.1
HLA-DQB1-202ENST00000399079 STK24Q9Y6E0 443 aa15.65■□□□□ 0.1
HLA-DQB1-202ENST00000399079 LINC00271P0C7V0 271 aa15.64■□□□□ 0.09
HLA-DQB1-202ENST00000399079 PTENP60484 403 aa15.64■□□□□ 0.09
HLA-DQB1-202ENST00000399079 GRB10Q13322 594 aa15.64■□□□□ 0.09
HLA-DQB1-202ENST00000399079 PTPAQ15257 358 aa15.64■□□□□ 0.09
HLA-DQB1-202ENST00000399079 CCDC85BQ15834 202 aaPredicted RBP15.64■□□□□ 0.09
HLA-DQB1-202ENST00000399079 EPC2Q52LR7 807 aa15.64■□□□□ 0.09
HLA-DQB1-202ENST00000399079 SRGAP1Q7Z6B7 1085 aa15.64■□□□□ 0.09
HLA-DQB1-202ENST00000399079 RNF169Q8NCN4 708 aa15.64■□□□□ 0.09
HLA-DQB1-202ENST00000399079 MCPH1Q8NEM0 835 aa15.64■□□□□ 0.09
HLA-DQB1-202ENST00000399079 PPM1EQ8WY54 764 aa15.64■□□□□ 0.09
HLA-DQB1-202ENST00000399079 PNMA5Q96PV4 448 aa15.64■□□□□ 0.09
HLA-DQB1-202ENST00000399079 TMEM161AQ9NX61 479 aa15.64■□□□□ 0.09
HLA-DQB1-202ENST00000399079 DNM3Q9UQ16 869 aa15.64■□□□□ 0.09
HLA-DQB1-202ENST00000399079 VCANP13611 3396 aa15.64■□□□□ 0.09
HLA-DQB1-202ENST00000399079 A0A0U1RQF3 1178 aa15.63■□□□□ 0.09
HLA-DQB1-202ENST00000399079 BMP15O95972 392 aa15.63■□□□□ 0.09
HLA-DQB1-202ENST00000399079 CYP11B2P19099 503 aa15.63■□□□□ 0.09
HLA-DQB1-202ENST00000399079 MARCKSP29966 332 aaPredicted RBP15.63■□□□□ 0.09
HLA-DQB1-202ENST00000399079 HOXA11P31270 313 aaPredicted RBP15.63■□□□□ 0.09
HLA-DQB1-202ENST00000399079 PHKA2P46019 1235 aa15.63■□□□□ 0.09
HLA-DQB1-202ENST00000399079 PKP1Q13835 747 aa15.63■□□□□ 0.09
HLA-DQB1-202ENST00000399079 LONRF3Q496Y0 759 aa15.63■□□□□ 0.09
HLA-DQB1-202ENST00000399079 TWF2Q6IBS0 349 aaKnown RBP15.63■□□□□ 0.09
HLA-DQB1-202ENST00000399079 FAM43BQ6ZT52 329 aaPredicted RBP15.63■□□□□ 0.09
HLA-DQB1-202ENST00000399079 ECHDC2Q86YB7 292 aa15.63■□□□□ 0.09
HLA-DQB1-202ENST00000399079 TMEM192Q8IY95 271 aa15.63■□□□□ 0.09
HLA-DQB1-202ENST00000399079 FBXO22Q8NEZ5 403 aa15.63■□□□□ 0.09
HLA-DQB1-202ENST00000399079 BSNDQ8WZ55 320 aa15.63■□□□□ 0.09
HLA-DQB1-202ENST00000399079 USP28Q96RU2 1077 aa15.63■□□□□ 0.09
HLA-DQB1-202ENST00000399079 ZSCAN16Q9H4T2 348 aaPredicted RBP15.63■□□□□ 0.09
HLA-DQB1-202ENST00000399079 CHST12Q9NRB3 414 aa15.63■□□□□ 0.09
HLA-DQB1-202ENST00000399079 DACT1Q9NYF0 836 aa15.63■□□□□ 0.09
HLA-DQB1-202ENST00000399079 MRPL42Q9Y6G3 142 aaKnown RBP15.63■□□□□ 0.09
HLA-DQB1-202ENST00000399079 LRRIQ4A6NIV6 560 aa15.63■□□□□ 0.09
HLA-DQB1-202ENST00000399079 INO80B-WBP1J3KQ70 363 aa15.63■□□□□ 0.09
HLA-DQB1-202ENST00000399079 EYA4O95677 639 aa15.63■□□□□ 0.09
HLA-DQB1-202ENST00000399079 ATF7P17544 494 aaPredicted RBP15.63■□□□□ 0.09
HLA-DQB1-202ENST00000399079 TFDP1Q14186 410 aa15.63■□□□□ 0.09
HLA-DQB1-202ENST00000399079 SPECC1Q5M775 1068 aa15.63■□□□□ 0.09
HLA-DQB1-202ENST00000399079 HYIQ5T013 277 aa15.63■□□□□ 0.09
HLA-DQB1-202ENST00000399079 CABP7Q86V35 215 aa15.63■□□□□ 0.09
HLA-DQB1-202ENST00000399079 CMTR2Q8IYT2 770 aaKnown RBP15.63■□□□□ 0.09
HLA-DQB1-202ENST00000399079 MICALL1Q8N3F8 863 aa15.63■□□□□ 0.09
HLA-DQB1-202ENST00000399079 ELAC1Q9H777 363 aaKnown RBP15.63■□□□□ 0.09
HLA-DQB1-202ENST00000399079 AGPAT5Q9NUQ2 364 aa15.63■□□□□ 0.09
HLA-DQB1-202ENST00000399079 HCSTQ9UBK5 93 aa15.63■□□□□ 0.09
HLA-DQB1-202ENST00000399079 MTCH2Q9Y6C9 303 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms