RNA–Protein interactions for RNA: ENST00000398868.7

ATL3-201, Transcript of atlastin GTPase 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ATL3, Length 7,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-201ENST00000398868 GGA3Q9NZ52 723 aa9.98□□□□□ -0.81
ATL3-201ENST00000398868 PLAAQ9Y263 795 aa9.98□□□□□ -0.81
ATL3-201ENST00000398868 ABCC2Q92887 1545 aa9.98□□□□□ -0.81
ATL3-201ENST00000398868 TRIM66O15016 1216 aa9.98□□□□□ -0.81
ATL3-201ENST00000398868 SERPINI2O75830 405 aa9.98□□□□□ -0.81
ATL3-201ENST00000398868 POU5F1BQ06416 359 aa9.98□□□□□ -0.81
ATL3-201ENST00000398868 CAPRIN1Q14444 709 aaKnown RBP9.98□□□□□ -0.81
ATL3-201ENST00000398868 PRR23CQ6ZRP0 262 aa9.98□□□□□ -0.81
ATL3-201ENST00000398868 NRBF2Q96F24 287 aa9.98□□□□□ -0.81
ATL3-201ENST00000398868 FSD1LQ9BXM9 530 aa9.98□□□□□ -0.81
ATL3-201ENST00000398868 RAD18Q9NS91 495 aa9.98□□□□□ -0.81
ATL3-201ENST00000398868 POLRMTO00411 1230 aaKnown RBP9.98□□□□□ -0.81
ATL3-201ENST00000398868 SLFN14P0C7P3 912 aa9.98□□□□□ -0.81
ATL3-201ENST00000398868 GGCXP38435 758 aa9.98□□□□□ -0.81
ATL3-201ENST00000398868 KCNJ6P48051 423 aa9.98□□□□□ -0.81
ATL3-201ENST00000398868 EPHB4P54760 987 aa9.98□□□□□ -0.81
ATL3-201ENST00000398868 BBS9Q3SYG4 887 aa9.98□□□□□ -0.81
ATL3-201ENST00000398868 TMEM143Q96AN5 459 aa9.98□□□□□ -0.81
ATL3-201ENST00000398868 CCDC17Q96LX7 622 aa9.98□□□□□ -0.81
ATL3-201ENST00000398868 NDFIP2Q9NV92 336 aa9.98□□□□□ -0.81
ATL3-201ENST00000398868 MAN1B1Q9UKM7 699 aa9.98□□□□□ -0.81
ATL3-201ENST00000398868 PFDN6O15212 129 aa9.98□□□□□ -0.81
ATL3-201ENST00000398868 GYG2O15488 501 aa9.98□□□□□ -0.81
ATL3-201ENST00000398868 TAS2R42Q7RTR8 314 aa9.98□□□□□ -0.81
ATL3-201ENST00000398868 OXER1Q8TDS5 423 aa9.98□□□□□ -0.81
ATL3-201ENST00000398868 USP33Q8TEY7 942 aa9.98□□□□□ -0.81
ATL3-201ENST00000398868 SNX19Q92543 992 aa9.98□□□□□ -0.81
ATL3-201ENST00000398868 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.98□□□□□ -0.81
ATL3-201ENST00000398868 EDEM3Q9BZQ6 932 aa9.98□□□□□ -0.81
ATL3-201ENST00000398868 COA1Q9GZY4 146 aa9.98□□□□□ -0.81
ATL3-201ENST00000398868 SUCLA2Q9P2R7 463 aaPredicted RBP9.98□□□□□ -0.81
ATL3-201ENST00000398868 DOLKQ9UPQ8 538 aa9.98□□□□□ -0.81
ATL3-201ENST00000398868 TSC22D4Q9Y3Q8 395 aa9.98□□□□□ -0.81
ATL3-201ENST00000398868 PCDHA5Q9Y5H7 936 aa9.98□□□□□ -0.81
ATL3-201ENST00000398868 PFKFB2O60825 505 aa9.98□□□□□ -0.81
ATL3-201ENST00000398868 SPAG7O75391 227 aa9.98□□□□□ -0.81
ATL3-201ENST00000398868 RWDD2BP57060 319 aa9.98□□□□□ -0.81
ATL3-201ENST00000398868 ADGRF4Q8IZF3 695 aa9.98□□□□□ -0.81
ATL3-201ENST00000398868 ARMC2Q8NEN0 867 aa9.98□□□□□ -0.81
ATL3-201ENST00000398868 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.98□□□□□ -0.81
ATL3-201ENST00000398868 KIF12Q96FN5 646 aa9.98□□□□□ -0.81
ATL3-201ENST00000398868 TTC1Q99614 292 aa9.98□□□□□ -0.81
ATL3-201ENST00000398868 DCTN4Q9UJW0 460 aa9.98□□□□□ -0.81
ATL3-201ENST00000398868 UBE2Q2LH0YL09 131 aa9.97□□□□□ -0.81
ATL3-201ENST00000398868 BRD1O95696 1058 aa9.97□□□□□ -0.81
ATL3-201ENST00000398868 ASNSP08243 561 aa9.97□□□□□ -0.81
ATL3-201ENST00000398868 TCP1P17987 556 aaKnown RBP9.97□□□□□ -0.81
ATL3-201ENST00000398868 ZNF699Q32M78 642 aa9.97□□□□□ -0.81
ATL3-201ENST00000398868 RC3H1Q5TC82 1133 aaKnown RBP9.97□□□□□ -0.81
ATL3-201ENST00000398868 MAIP1Q8WWC4 291 aa9.97□□□□□ -0.81
ATL3-201ENST00000398868 PBXIP1Q96AQ6 731 aa9.97□□□□□ -0.81
ATL3-201ENST00000398868 GIMAP4Q9NUV9 329 aa9.97□□□□□ -0.81
ATL3-201ENST00000398868 GCC2Q8IWJ2 1684 aa9.97□□□□□ -0.81
ATL3-201ENST00000398868 PER1O15534 1290 aaPredicted RBP9.97□□□□□ -0.81
ATL3-201ENST00000398868 ARHGEF9O43307 516 aa9.97□□□□□ -0.81
ATL3-201ENST00000398868 CD2BP2O95400 341 aaKnown RBP9.97□□□□□ -0.81
ATL3-201ENST00000398868 HOXD10P28358 340 aa9.97□□□□□ -0.81
ATL3-201ENST00000398868 ZMYM1Q5SVZ6 1142 aa9.97□□□□□ -0.81
ATL3-201ENST00000398868 PPP1R18Q6NYC8 613 aa9.97□□□□□ -0.81
ATL3-201ENST00000398868 RAB44Q7Z6P3 723 aaPredicted RBP9.97□□□□□ -0.81
ATL3-201ENST00000398868 ERICH1Q86X53 443 aa9.97□□□□□ -0.81
ATL3-201ENST00000398868 SPIRE2Q8WWL2 714 aa9.97□□□□□ -0.81
ATL3-201ENST00000398868 TMEM39BQ9GZU3 492 aa9.97□□□□□ -0.81
ATL3-201ENST00000398868 ARHGAP26Q9UNA1 814 aa9.97□□□□□ -0.81
ATL3-201ENST00000398868 DAAM1Q9Y4D1 1078 aa9.97□□□□□ -0.81
ATL3-201ENST00000398868 CFAP43Q8NDM7 1665 aa9.97□□□□□ -0.81
ATL3-201ENST00000398868 PNMA6FA0A0J9YX94 578 aa9.97□□□□□ -0.81
ATL3-201ENST00000398868 CYP27B1O15528 508 aa9.97□□□□□ -0.81
ATL3-201ENST00000398868 GRAP2O75791 330 aa9.97□□□□□ -0.81
ATL3-201ENST00000398868 CYP2E1P05181 493 aaPredicted RBP9.97□□□□□ -0.81
ATL3-201ENST00000398868 H2AFZP0C0S5 128 aa9.97□□□□□ -0.81
ATL3-201ENST00000398868 DNAJB2P25686 324 aa9.97□□□□□ -0.81
ATL3-201ENST00000398868 GARSP41250 739 aaKnown RBP9.97□□□□□ -0.81
ATL3-201ENST00000398868 RGS7P49802 495 aa9.97□□□□□ -0.81
ATL3-201ENST00000398868 CAPRIN2Q6IMN6 1127 aaKnown RBP9.97□□□□□ -0.81
ATL3-201ENST00000398868 H2AFVQ71UI9 128 aa9.97□□□□□ -0.81
ATL3-201ENST00000398868 DEFB128Q7Z7B8 93 aa9.97□□□□□ -0.81
ATL3-201ENST00000398868 FAF2Q96CS3 445 aa9.97□□□□□ -0.81
ATL3-201ENST00000398868 DACH2Q96NX9 599 aa9.97□□□□□ -0.81
ATL3-201ENST00000398868 ADAM21Q9UKJ8 722 aa9.97□□□□□ -0.81
ATL3-201ENST00000398868 COL15A1P39059 1388 aa9.97□□□□□ -0.81
ATL3-201ENST00000398868 M0QYV0 167 aa9.97□□□□□ -0.81
ATL3-201ENST00000398868 TAL1P17542 331 aaPredicted RBP9.97□□□□□ -0.81
ATL3-201ENST00000398868 RAD23BP54727 409 aa9.97□□□□□ -0.81
ATL3-201ENST00000398868 TTC17Q96AE7 1141 aa9.97□□□□□ -0.81
ATL3-201ENST00000398868 BLMP54132 1417 aaPredicted RBP9.97□□□□□ -0.81
ATL3-201ENST00000398868 MYOM2P54296 1465 aa9.97□□□□□ -0.81
ATL3-201ENST00000398868 HEG1Q9ULI3 1381 aa9.97□□□□□ -0.81
ATL3-201ENST00000398868 KBTBD13C9JR72 458 aa9.97□□□□□ -0.81
ATL3-201ENST00000398868 EVI5O60447 810 aa9.97□□□□□ -0.81
ATL3-201ENST00000398868 TADA2AO75478 443 aa9.97□□□□□ -0.81
ATL3-201ENST00000398868 ENDOD1O94919 500 aa9.97□□□□□ -0.81
ATL3-201ENST00000398868 ATXN3P54252 364 aaPredicted RBP9.97□□□□□ -0.81
ATL3-201ENST00000398868 NFIXQ14938 502 aa9.97□□□□□ -0.81
ATL3-201ENST00000398868 LRRC14Q15048 493 aa9.97□□□□□ -0.81
ATL3-201ENST00000398868 COBLL1Q53SF7 1204 aa9.97□□□□□ -0.81
ATL3-201ENST00000398868 C1orf146Q5VVC0 180 aa9.97□□□□□ -0.81
ATL3-201ENST00000398868 STAG2Q8N3U4 1231 aa9.97□□□□□ -0.81
ATL3-201ENST00000398868 SSH3Q8TE77 659 aa9.97□□□□□ -0.81
ATL3-201ENST00000398868 ZKSCAN4Q969J2 545 aaPredicted RBP9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms