RNA–Protein interactions for RNA: ENST00000398792.3

CDH23-204, Transcript of cadherin related 23, humanhuman

TSL 2

Gene CDH23, Length 1,649 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23-204ENST00000398792 SH3TC2Q8TF17 1288 aa18.36■□□□□ 0.53
CDH23-204ENST00000398792 LMBR1Q8WVP7 490 aa18.36■□□□□ 0.53
CDH23-204ENST00000398792 PSPC1Q8WXF1 523 aaKnown RBP18.36■□□□□ 0.53
CDH23-204ENST00000398792 ZBTB10Q96DT7 871 aa18.36■□□□□ 0.53
CDH23-204ENST00000398792 MTG1Q9BT17 334 aaPredicted RBP18.36■□□□□ 0.53
CDH23-204ENST00000398792 SUGCTQ9HAC7 445 aa18.36■□□□□ 0.53
CDH23-204ENST00000398792 NRCAMQ92823 1304 aa18.35■□□□□ 0.53
CDH23-204ENST00000398792 CEP350Q5VT06 3117 aa18.35■□□□□ 0.53
CDH23-204ENST00000398792 RRN3P2A6NIE6 340 aa18.35■□□□□ 0.53
CDH23-204ENST00000398792 ATP1A3P13637 1013 aa18.35■□□□□ 0.53
CDH23-204ENST00000398792 KLRC1P26715 233 aa18.35■□□□□ 0.53
CDH23-204ENST00000398792 CLCN3P51790 818 aa18.35■□□□□ 0.53
CDH23-204ENST00000398792 CAPSQ13938 189 aa18.35■□□□□ 0.53
CDH23-204ENST00000398792 MARCH8Q5T0T0 291 aa18.35■□□□□ 0.53
CDH23-204ENST00000398792 EFCAB12Q6NXP0 572 aa18.35■□□□□ 0.53
CDH23-204ENST00000398792 MTHFD1LQ6UB35 978 aa18.35■□□□□ 0.53
CDH23-204ENST00000398792 KSR1Q8IVT5 923 aa18.35■□□□□ 0.53
CDH23-204ENST00000398792 CSGALNACT2Q8N6G5 542 aa18.35■□□□□ 0.53
CDH23-204ENST00000398792 HVCN1Q96D96 273 aa18.35■□□□□ 0.53
CDH23-204ENST00000398792 TYW1Q9NV66 732 aaKnown RBP18.35■□□□□ 0.53
CDH23-204ENST00000398792 ARHGAP28Q9P2N2 729 aa18.35■□□□□ 0.53
CDH23-204ENST00000398792 KCNG1Q9UIX4 513 aa18.35■□□□□ 0.53
CDH23-204ENST00000398792 SCN10AQ9Y5Y9 1956 aa18.35■□□□□ 0.53
CDH23-204ENST00000398792 H0YCG3 227 aa18.34■□□□□ 0.53
CDH23-204ENST00000398792 PDXKO00764 312 aa18.34■□□□□ 0.53
CDH23-204ENST00000398792 CHMP4BP1P59074 171 aa18.34■□□□□ 0.53
CDH23-204ENST00000398792 PLCB2Q00722 1185 aa18.34■□□□□ 0.53
CDH23-204ENST00000398792 HSP90AA4PQ58FG1 418 aa18.34■□□□□ 0.53
CDH23-204ENST00000398792 CCSAPQ6IQ19 270 aaPredicted RBP18.34■□□□□ 0.53
CDH23-204ENST00000398792 CXCL17Q6UXB2 119 aa18.34■□□□□ 0.53
CDH23-204ENST00000398792 METTL13Q8N6R0 699 aa18.34■□□□□ 0.53
CDH23-204ENST00000398792 NOC3LQ8WTT2 800 aaKnown RBP18.34■□□□□ 0.53
CDH23-204ENST00000398792 PRPF31Q8WWY3 499 aaKnown RBP18.34■□□□□ 0.53
CDH23-204ENST00000398792 KCNN1Q92952 543 aa18.34■□□□□ 0.53
CDH23-204ENST00000398792 THAP9Q9H5L6 903 aa18.34■□□□□ 0.53
CDH23-204ENST00000398792 SETD4Q9NVD3 440 aa18.34■□□□□ 0.53
CDH23-204ENST00000398792 TRAF3IP3Q9Y228 551 aa18.34■□□□□ 0.53
CDH23-204ENST00000398792 DENND3A2RUS2 1198 aa18.34■□□□□ 0.53
CDH23-204ENST00000398792 LRRIQ4A6NIV6 560 aa18.34■□□□□ 0.53
CDH23-204ENST00000398792 HSPA8P11142 646 aaKnown RBP18.34■□□□□ 0.53
CDH23-204ENST00000398792 MXD4Q14582 209 aaPredicted RBP18.34■□□□□ 0.53
CDH23-204ENST00000398792 EDRF1Q3B7T1 1238 aa18.34■□□□□ 0.53
CDH23-204ENST00000398792 LRRC55Q6ZSA7 311 aa18.34■□□□□ 0.53
CDH23-204ENST00000398792 MAP4K3Q8IVH8 894 aa18.34■□□□□ 0.53
CDH23-204ENST00000398792 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.34■□□□□ 0.53
CDH23-204ENST00000398792 TMEM206Q9H813 350 aa18.34■□□□□ 0.53
CDH23-204ENST00000398792 SUCLA2Q9P2R7 463 aaPredicted RBP18.34■□□□□ 0.53
CDH23-204ENST00000398792 TGFB1I1O43294 461 aa18.33■□□□□ 0.52
CDH23-204ENST00000398792 CALUO43852 315 aaPredicted RBP18.33■□□□□ 0.52
CDH23-204ENST00000398792 ASGR1P07306 291 aa18.33■□□□□ 0.52
CDH23-204ENST00000398792 SCP2P22307 547 aa18.33■□□□□ 0.52
CDH23-204ENST00000398792 HOXC8P31273 242 aa18.33■□□□□ 0.52
CDH23-204ENST00000398792 ABCD1P33897 745 aa18.33■□□□□ 0.52
CDH23-204ENST00000398792 DNM2P50570 870 aa18.33■□□□□ 0.52
CDH23-204ENST00000398792 LAMTOR4Q0VGL1 99 aa18.33■□□□□ 0.52
CDH23-204ENST00000398792 LHX8Q68G74 356 aa18.33■□□□□ 0.52
CDH23-204ENST00000398792 RNF180Q86T96 592 aa18.33■□□□□ 0.52
CDH23-204ENST00000398792 ZC3H3Q8IXZ2 948 aaKnown RBP18.33■□□□□ 0.52
CDH23-204ENST00000398792 PCSK9Q8NBP7 692 aaKnown RBP18.33■□□□□ 0.52
CDH23-204ENST00000398792 DEPTORQ8TB45 409 aa18.33■□□□□ 0.52
CDH23-204ENST00000398792 PPP1R13LQ8WUF5 828 aa18.33■□□□□ 0.52
CDH23-204ENST00000398792 ACCSQ96QU6 501 aa18.33■□□□□ 0.52
CDH23-204ENST00000398792 SRRTQ9BXP5 876 aaKnown RBP18.33■□□□□ 0.52
CDH23-204ENST00000398792 IKZF4Q9H2S9 585 aa18.33■□□□□ 0.52
CDH23-204ENST00000398792 TBX20Q9UMR3 447 aa18.33■□□□□ 0.52
CDH23-204ENST00000398792 MBLAC1A4D2B0 266 aaPredicted RBP18.32■□□□□ 0.52
CDH23-204ENST00000398792 ADAM17P78536 824 aa18.32■□□□□ 0.52
CDH23-204ENST00000398792 KCNA10Q16322 511 aa18.32■□□□□ 0.52
CDH23-204ENST00000398792 SLC9C1Q4G0N8 1177 aa18.32■□□□□ 0.52
CDH23-204ENST00000398792 CDCA2Q69YH5 1023 aaPredicted RBP18.32■□□□□ 0.52
CDH23-204ENST00000398792 NFRKBQ6P4R8 1299 aa18.32■□□□□ 0.52
CDH23-204ENST00000398792 IRF2BP1Q8IU81 584 aa18.32■□□□□ 0.52
CDH23-204ENST00000398792 RHPN2Q8IUC4 686 aa18.32■□□□□ 0.52
CDH23-204ENST00000398792 ANP32BQ92688 251 aaKnown RBP18.32■□□□□ 0.52
CDH23-204ENST00000398792 GBP3Q9H0R5 595 aa18.32■□□□□ 0.52
CDH23-204ENST00000398792 PHLPP2Q6ZVD8 1323 aa18.32■□□□□ 0.52
CDH23-204ENST00000398792 CENPFP49454 3210 aa18.31■□□□□ 0.52
CDH23-204ENST00000398792 MYCNP04198 464 aaPredicted RBP18.31■□□□□ 0.52
CDH23-204ENST00000398792 GJB1P08034 283 aa18.31■□□□□ 0.52
CDH23-204ENST00000398792 TMOD1P28289 359 aa18.31■□□□□ 0.52
CDH23-204ENST00000398792 FANCCQ00597 558 aa18.31■□□□□ 0.52
CDH23-204ENST00000398792 FKBP3Q00688 224 aaKnown RBP18.31■□□□□ 0.52
CDH23-204ENST00000398792 SPAG1Q07617 926 aa18.31■□□□□ 0.52
CDH23-204ENST00000398792 HIC1Q14526 733 aa18.31■□□□□ 0.52
CDH23-204ENST00000398792 NFIL3Q16649 462 aa18.31■□□□□ 0.52
CDH23-204ENST00000398792 HS2ST1Q7LGA3 356 aa18.31■□□□□ 0.52
CDH23-204ENST00000398792 TAS1R3Q7RTX0 852 aa18.31■□□□□ 0.52
CDH23-204ENST00000398792 SYCP3Q8IZU3 236 aa18.31■□□□□ 0.52
CDH23-204ENST00000398792 C7orf31Q8N865 590 aa18.31■□□□□ 0.52
CDH23-204ENST00000398792 HDAC6Q9UBN7 1215 aa18.31■□□□□ 0.52
CDH23-204ENST00000398792 C17orf102A2RUQ5 167 aa18.31■□□□□ 0.52
CDH23-204ENST00000398792 KCNJ18B7U540 433 aa18.31■□□□□ 0.52
CDH23-204ENST00000398792 ADCY5O95622 1261 aa18.31■□□□□ 0.52
CDH23-204ENST00000398792 FGFR1OPO95684 399 aaKnown RBP18.31■□□□□ 0.52
CDH23-204ENST00000398792 CDK11BP21127 795 aaKnown RBP18.31■□□□□ 0.52
CDH23-204ENST00000398792 TFDP1Q14186 410 aa18.31■□□□□ 0.52
CDH23-204ENST00000398792 KCNJ12Q14500 433 aa18.31■□□□□ 0.52
CDH23-204ENST00000398792 TCP11X2Q5H9J9 407 aa18.31■□□□□ 0.52
CDH23-204ENST00000398792 FAM114A1Q8IWE2 563 aa18.31■□□□□ 0.52
CDH23-204ENST00000398792 RNF149Q8NC42 400 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms