RNA–Protein interactions for RNA: ENST00000398587.6

PCDHGA11-201, Transcript of protocadherin gamma subfamily A, 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA11, Length 4,647 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11-201ENST00000398587 RASGRF2O14827 1237 aa15.27■□□□□ 0.04
PCDHGA11-201ENST00000398587 SOX5P35711 763 aa15.27■□□□□ 0.04
PCDHGA11-201ENST00000398587 MKRN3Q13064 507 aaKnown RBP15.27■□□□□ 0.04
PCDHGA11-201ENST00000398587 ZNF394Q53GI3 561 aa15.27■□□□□ 0.04
PCDHGA11-201ENST00000398587 TTC19Q6DKK2 380 aaPredicted RBP15.27■□□□□ 0.04
PCDHGA11-201ENST00000398587 NFRKBQ6P4R8 1299 aa15.27■□□□□ 0.04
PCDHGA11-201ENST00000398587 OTUD5Q96G74 571 aa15.27■□□□□ 0.04
PCDHGA11-201ENST00000398587 TOPORSQ9NS56 1045 aaPredicted RBP15.27■□□□□ 0.04
PCDHGA11-201ENST00000398587 PFASO15067 1338 aa15.27■□□□□ 0.04
PCDHGA11-201ENST00000398587 NPHP3-ACAD11A0A0J9YXS1 232 aa15.27■□□□□ 0.03
PCDHGA11-201ENST00000398587 UBE2Q2LH0YL09 131 aa15.27■□□□□ 0.03
PCDHGA11-201ENST00000398587 SUN1O94901 812 aa15.27■□□□□ 0.03
PCDHGA11-201ENST00000398587 FTLP02792 175 aaPredicted RBP15.27■□□□□ 0.03
PCDHGA11-201ENST00000398587 BAATQ14032 418 aaPredicted RBP15.27■□□□□ 0.03
PCDHGA11-201ENST00000398587 ZNF699Q32M78 642 aa15.27■□□□□ 0.03
PCDHGA11-201ENST00000398587 GLYCTKQ8IVS8 523 aa15.27■□□□□ 0.03
PCDHGA11-201ENST00000398587 RBM41Q96IZ5 413 aaKnown RBP15.27■□□□□ 0.03
PCDHGA11-201ENST00000398587 LCMT1Q9UIC8 334 aa15.27■□□□□ 0.03
PCDHGA11-201ENST00000398587 CAPN7Q9Y6W3 813 aa15.27■□□□□ 0.03
PCDHGA11-201ENST00000398587 CALB1P05937 261 aa15.27■□□□□ 0.03
PCDHGA11-201ENST00000398587 ANXA13P27216 316 aa15.27■□□□□ 0.03
PCDHGA11-201ENST00000398587 ARHGEF6Q15052 776 aa15.27■□□□□ 0.03
PCDHGA11-201ENST00000398587 DARS2Q6PI48 645 aaKnown RBP15.27■□□□□ 0.03
PCDHGA11-201ENST00000398587 GPD1LQ8N335 351 aa15.27■□□□□ 0.03
PCDHGA11-201ENST00000398587 RFFLQ8WZ73 363 aa15.27■□□□□ 0.03
PCDHGA11-201ENST00000398587 RIT2Q99578 217 aa15.27■□□□□ 0.03
PCDHGA11-201ENST00000398587 MRPL4Q9BYD3 311 aaKnown RBP15.27■□□□□ 0.03
PCDHGA11-201ENST00000398587 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.27■□□□□ 0.03
PCDHGA11-201ENST00000398587 GRID2IPA4D2P6 1211 aa15.26■□□□□ 0.03
PCDHGA11-201ENST00000398587 HMGB1P1B2RPK0 211 aaPredicted RBP15.26■□□□□ 0.03
PCDHGA11-201ENST00000398587 PSMD14O00487 310 aa15.26■□□□□ 0.03
PCDHGA11-201ENST00000398587 DGAT1O75907 488 aa15.26■□□□□ 0.03
PCDHGA11-201ENST00000398587 BASP1P80723 227 aaKnown RBP15.26■□□□□ 0.03
PCDHGA11-201ENST00000398587 NAA30Q147X3 362 aaPredicted RBP15.26■□□□□ 0.03
PCDHGA11-201ENST00000398587 NCAPGQ9BPX3 1015 aa15.26■□□□□ 0.03
PCDHGA11-201ENST00000398587 RNF181Q9P0P0 153 aa15.26■□□□□ 0.03
PCDHGA11-201ENST00000398587 BAIAP2L1Q9UHR4 511 aa15.26■□□□□ 0.03
PCDHGA11-201ENST00000398587 SART1O43290 800 aaKnown RBP15.26■□□□□ 0.03
PCDHGA11-201ENST00000398587 NR1D1P20393 614 aa15.26■□□□□ 0.03
PCDHGA11-201ENST00000398587 PSMA2P25787 234 aa15.26■□□□□ 0.03
PCDHGA11-201ENST00000398587 GARSP41250 739 aaKnown RBP15.26■□□□□ 0.03
PCDHGA11-201ENST00000398587 MRPS25P82663 173 aaKnown RBP15.26■□□□□ 0.03
PCDHGA11-201ENST00000398587 RTFDC1Q9BY42 306 aaPredicted RBP15.26■□□□□ 0.03
PCDHGA11-201ENST00000398587 CTNND1O60716 968 aaKnown RBP15.26■□□□□ 0.03
PCDHGA11-201ENST00000398587 TJP3O95049 919 aa15.26■□□□□ 0.03
PCDHGA11-201ENST00000398587 XKR3Q5GH77 459 aa15.26■□□□□ 0.03
PCDHGA11-201ENST00000398587 CCDC197Q8NCU1 140 aa15.26■□□□□ 0.03
PCDHGA11-201ENST00000398587 MORC4Q8TE76 937 aa15.26■□□□□ 0.03
PCDHGA11-201ENST00000398587 C11orf70Q9BRQ4 267 aa15.26■□□□□ 0.03
PCDHGA11-201ENST00000398587 HDAC6Q9UBN7 1215 aa15.26■□□□□ 0.03
PCDHGA11-201ENST00000398587 PPP1R3GB7ZBB8 358 aa15.26■□□□□ 0.03
PCDHGA11-201ENST00000398587 ARHGEF18Q6ZSZ5 1173 aa15.26■□□□□ 0.03
PCDHGA11-201ENST00000398587 C2orf69Q8N8R5 385 aa15.26■□□□□ 0.03
PCDHGA11-201ENST00000398587 CCNYQ8ND76 341 aa15.26■□□□□ 0.03
PCDHGA11-201ENST00000398587 ZNF280CQ8ND82 737 aa15.26■□□□□ 0.03
PCDHGA11-201ENST00000398587 ZNF564Q8TBZ8 553 aaPredicted RBP15.26■□□□□ 0.03
PCDHGA11-201ENST00000398587 AGO2Q9UKV8 859 aaKnown RBP15.26■□□□□ 0.03
PCDHGA11-201ENST00000398587 STRIP2Q9ULQ0 834 aa15.26■□□□□ 0.03
PCDHGA11-201ENST00000398587 NOVA2Q9UNW9 492 aaKnown RBP15.26■□□□□ 0.03
PCDHGA11-201ENST00000398587 KIAA0391O15091 583 aaKnown RBP15.25■□□□□ 0.03
PCDHGA11-201ENST00000398587 NR3C2P08235 984 aa15.25■□□□□ 0.03
PCDHGA11-201ENST00000398587 TOB1P50616 345 aaPredicted RBP15.25■□□□□ 0.03
PCDHGA11-201ENST00000398587 PDE1BQ01064 536 aa15.25■□□□□ 0.03
PCDHGA11-201ENST00000398587 PRPSAP1Q14558 356 aa15.25■□□□□ 0.03
PCDHGA11-201ENST00000398587 TRIP13Q15645 432 aaPredicted RBP15.25■□□□□ 0.03
PCDHGA11-201ENST00000398587 SLC18A3Q16572 532 aa15.25■□□□□ 0.03
PCDHGA11-201ENST00000398587 ADGRA1Q86SQ6 560 aa15.25■□□□□ 0.03
PCDHGA11-201ENST00000398587 SPATA24Q86W54 205 aa15.25■□□□□ 0.03
PCDHGA11-201ENST00000398587 PDIK1LQ8N165 341 aa15.25■□□□□ 0.03
PCDHGA11-201ENST00000398587 SIX6OS1Q8N1H7 587 aa15.25■□□□□ 0.03
PCDHGA11-201ENST00000398587 IRX2Q9BZI1 471 aaPredicted RBP15.25■□□□□ 0.03
PCDHGA11-201ENST00000398587 SNX24Q9Y343 169 aa15.25■□□□□ 0.03
PCDHGA11-201ENST00000398587 TADA3O75528 432 aa15.25■□□□□ 0.03
PCDHGA11-201ENST00000398587 TKFCQ3LXA3 575 aa15.25■□□□□ 0.03
PCDHGA11-201ENST00000398587 KCNV1Q6PIU1 500 aa15.25■□□□□ 0.03
PCDHGA11-201ENST00000398587 TRIM72Q6ZMU5 477 aa15.25■□□□□ 0.03
PCDHGA11-201ENST00000398587 NGRNQ9NPE2 291 aaKnown RBP15.25■□□□□ 0.03
PCDHGA11-201ENST00000398587 RBAKQ9NYW8 714 aaPredicted RBP15.25■□□□□ 0.03
PCDHGA11-201ENST00000398587 PODXL2Q9NZ53 605 aa15.25■□□□□ 0.03
PCDHGA11-201ENST00000398587 NCK2O43639 380 aa15.25■□□□□ 0.03
PCDHGA11-201ENST00000398587 MSH2P43246 934 aa15.25■□□□□ 0.03
PCDHGA11-201ENST00000398587 EFNA5P52803 228 aa15.25■□□□□ 0.03
PCDHGA11-201ENST00000398587 C6orf118Q5T5N4 469 aa15.25■□□□□ 0.03
PCDHGA11-201ENST00000398587 ZNF746Q6NUN9 644 aaPredicted RBP15.25■□□□□ 0.03
PCDHGA11-201ENST00000398587 AGBL3Q8NEM8 1001 aa15.25■□□□□ 0.03
PCDHGA11-201ENST00000398587 OR6B3Q8NGW1 331 aa15.25■□□□□ 0.03
PCDHGA11-201ENST00000398587 SLC16A10Q8TF71 515 aa15.25■□□□□ 0.03
PCDHGA11-201ENST00000398587 ZDHHC15Q96MV8 337 aa15.25■□□□□ 0.03
PCDHGA11-201ENST00000398587 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.25■□□□□ 0.03
PCDHGA11-201ENST00000398587 AGPAT5Q9NUQ2 364 aa15.25■□□□□ 0.03
PCDHGA11-201ENST00000398587 ATP1A1P05023 1023 aaKnown RBP15.24■□□□□ 0.03
PCDHGA11-201ENST00000398587 AP3M2P53677 418 aa15.24■□□□□ 0.03
PCDHGA11-201ENST00000398587 ITKQ08881 620 aa15.24■□□□□ 0.03
PCDHGA11-201ENST00000398587 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.24■□□□□ 0.03
PCDHGA11-201ENST00000398587 CPP00450 1065 aa15.24■□□□□ 0.03
PCDHGA11-201ENST00000398587 ACTN1P12814 892 aa15.24■□□□□ 0.03
PCDHGA11-201ENST00000398587 PCK1P35558 622 aa15.24■□□□□ 0.03
PCDHGA11-201ENST00000398587 SLCO1A2P46721 670 aa15.24■□□□□ 0.03
PCDHGA11-201ENST00000398587 GPC3P51654 580 aa15.24■□□□□ 0.03
PCDHGA11-201ENST00000398587 ADCY2Q08462 1091 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms