RNA–Protein interactions for RNA: ENST00000398258.7

CD47-203, Transcript of CD47 molecule, humanhuman

TSL 3

Gene CD47, Length 469 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-203ENST00000398258 CHST14Q8NCH0 376 aa3.83□□□□□ -1.8
CD47-203ENST00000398258 OR2W6PQ8NHA6 318 aa3.83□□□□□ -1.8
CD47-203ENST00000398258 LEO1Q8WVC0 666 aaPredicted RBP3.83□□□□□ -1.8
CD47-203ENST00000398258 C12orf65Q9H3J6 166 aaKnown RBP3.83□□□□□ -1.8
CD47-203ENST00000398258 SLC6A20Q9NP91 592 aa3.83□□□□□ -1.8
CD47-203ENST00000398258 CCDC66A2RUB6 948 aa3.82□□□□□ -1.8
CD47-203ENST00000398258 K7ESF4 209 aa3.82□□□□□ -1.8
CD47-203ENST00000398258 M0R2C6 588 aa3.82□□□□□ -1.8
CD47-203ENST00000398258 ACOT7O00154 380 aa3.82□□□□□ -1.8
CD47-203ENST00000398258 NEMP1O14524 444 aa3.82□□□□□ -1.8
CD47-203ENST00000398258 KPNA6O60684 536 aa3.82□□□□□ -1.8
CD47-203ENST00000398258 PYGMP11217 842 aa3.82□□□□□ -1.8
CD47-203ENST00000398258 SPIRE1Q08AE8 756 aa3.82□□□□□ -1.8
CD47-203ENST00000398258 TUSC3Q13454 348 aa3.82□□□□□ -1.8
CD47-203ENST00000398258 NFYCQ13952 458 aa3.82□□□□□ -1.8
CD47-203ENST00000398258 STAT4Q14765 748 aa3.82□□□□□ -1.8
CD47-203ENST00000398258 CT47A1Q5JQC4 288 aaPredicted RBP3.82□□□□□ -1.8
CD47-203ENST00000398258 CYP4F22Q6NT55 531 aa3.82□□□□□ -1.8
CD47-203ENST00000398258 MRGPREQ86SM8 312 aa3.82□□□□□ -1.8
CD47-203ENST00000398258 CD244Q9BZW8 370 aa3.82□□□□□ -1.8
CD47-203ENST00000398258 PRDM13Q9H4Q3 707 aa3.82□□□□□ -1.8
CD47-203ENST00000398258 IFT22Q9H7X7 185 aa3.82□□□□□ -1.8
CD47-203ENST00000398258 SMURF1Q9HCE7 757 aa3.82□□□□□ -1.8
CD47-203ENST00000398258 HOMER2Q9NSB8 354 aa3.82□□□□□ -1.8
CD47-203ENST00000398258 PTGFRNQ9P2B2 879 aa3.82□□□□□ -1.8
CD47-203ENST00000398258 CBLCQ9ULV8 474 aa3.82□□□□□ -1.8
CD47-203ENST00000398258 COQ6Q9Y2Z9 468 aa3.82□□□□□ -1.8
CD47-203ENST00000398258 WASHC2CQ9Y4E1 1318 aa3.81□□□□□ -1.8
CD47-203ENST00000398258 TCRBV5S4A2TA0A5A2 114 aa3.81□□□□□ -1.8
CD47-203ENST00000398258 KCNK3O14649 394 aa3.81□□□□□ -1.8
CD47-203ENST00000398258 ARHGAP6O43182 974 aa3.81□□□□□ -1.8
CD47-203ENST00000398258 MAFKO60675 156 aa3.81□□□□□ -1.8
CD47-203ENST00000398258 AMY2AP04746 511 aa3.81□□□□□ -1.8
CD47-203ENST00000398258 ATP2A2P16615 1042 aaKnown RBP3.81□□□□□ -1.8
CD47-203ENST00000398258 KRT15P19012 456 aa3.81□□□□□ -1.8
CD47-203ENST00000398258 AMY2BP19961 511 aa3.81□□□□□ -1.8
CD47-203ENST00000398258 ADCYAP1R1P41586 468 aa3.81□□□□□ -1.8
CD47-203ENST00000398258 LSSP48449 732 aa3.81□□□□□ -1.8
CD47-203ENST00000398258 DNM2P50570 870 aa3.81□□□□□ -1.8
CD47-203ENST00000398258 SCNN1BP51168 640 aa3.81□□□□□ -1.8
CD47-203ENST00000398258 EPHA5P54756 1037 aa3.81□□□□□ -1.8
CD47-203ENST00000398258 STRN3Q13033 797 aa3.81□□□□□ -1.8
CD47-203ENST00000398258 GPR19Q15760 415 aa3.81□□□□□ -1.8
CD47-203ENST00000398258 ZNF568Q3ZCX4 644 aa3.81□□□□□ -1.8
CD47-203ENST00000398258 BRDTQ58F21 947 aaPredicted RBP3.81□□□□□ -1.8
CD47-203ENST00000398258 LHFPL2Q6ZUX7 228 aa3.81□□□□□ -1.8
CD47-203ENST00000398258 CISD2Q8N5K1 135 aaKnown RBP3.81□□□□□ -1.8
CD47-203ENST00000398258 UHMK1Q8TAS1 419 aaKnown RBP3.81□□□□□ -1.8
CD47-203ENST00000398258 WDR66Q8TBY9 1149 aa3.81□□□□□ -1.8
CD47-203ENST00000398258 TTC1Q99614 292 aa3.81□□□□□ -1.8
CD47-203ENST00000398258 PUS7LQ9H0K6 701 aaKnown RBP3.81□□□□□ -1.8
CD47-203ENST00000398258 CABP5Q9NP86 173 aa3.81□□□□□ -1.8
CD47-203ENST00000398258 SLC39A2Q9NP94 309 aa3.81□□□□□ -1.8
CD47-203ENST00000398258 CATSPERZQ9NTU4 200 aa3.81□□□□□ -1.8
CD47-203ENST00000398258 DSEQ9UL01 958 aa3.81□□□□□ -1.8
CD47-203ENST00000398258 APOBEC2Q9Y235 224 aaKnown RBP3.81□□□□□ -1.8
CD47-203ENST00000398258 ZNF891A8MT65 544 aaPredicted RBP3.8□□□□□ -1.8
CD47-203ENST00000398258 GCP02774 474 aa3.8□□□□□ -1.8
CD47-203ENST00000398258 ZBTB48P10074 688 aaPredicted RBP3.8□□□□□ -1.8
CD47-203ENST00000398258 RPS19P39019 145 aaKnown RBP3.8□□□□□ -1.8
CD47-203ENST00000398258 SCNN1GP51170 649 aa3.8□□□□□ -1.8
CD47-203ENST00000398258 JAM2P57087 298 aa3.8□□□□□ -1.8
CD47-203ENST00000398258 ST5P78524 1137 aa3.8□□□□□ -1.8
CD47-203ENST00000398258 CRY1Q16526 586 aa3.8□□□□□ -1.8
CD47-203ENST00000398258 FIGNQ5HY92 759 aa3.8□□□□□ -1.8
CD47-203ENST00000398258 ARHGAP36Q6ZRI8 547 aa3.8□□□□□ -1.8
CD47-203ENST00000398258 Q6ZRM9 215 aa3.8□□□□□ -1.8
CD47-203ENST00000398258 KCTD1Q719H9 257 aa3.8□□□□□ -1.8
CD47-203ENST00000398258 PNPLA5Q7Z6Z6 429 aaPredicted RBP3.8□□□□□ -1.8
CD47-203ENST00000398258 SGMS1Q86VZ5 419 aa3.8□□□□□ -1.8
CD47-203ENST00000398258 OSTM1Q86WC4 334 aa3.8□□□□□ -1.8
CD47-203ENST00000398258 SPATS2Q86XZ4 545 aaKnown RBP3.8□□□□□ -1.8
CD47-203ENST00000398258 PTRH1Q86Y79 214 aaKnown RBP3.8□□□□□ -1.8
CD47-203ENST00000398258 ATL2Q8NHH9 583 aa3.8□□□□□ -1.8
CD47-203ENST00000398258 SH3RF2Q8TEC5 729 aa3.8□□□□□ -1.8
CD47-203ENST00000398258 TMEM176AQ96HP8 235 aa3.8□□□□□ -1.8
CD47-203ENST00000398258 SCYL1Q96KG9 808 aa3.8□□□□□ -1.8
CD47-203ENST00000398258 XPO5Q9HAV4 1204 aaKnown RBP eCLIP3.8□□□□□ -1.8
CD47-203ENST00000398258 ADARB2Q9NS39 739 aaKnown RBP3.8□□□□□ -1.8
CD47-203ENST00000398258 PARPBPQ9NWS1 579 aa3.8□□□□□ -1.8
CD47-203ENST00000398258 AURKAIP1Q9NWT8 199 aaPredicted RBP3.8□□□□□ -1.8
CD47-203ENST00000398258 GIT1Q9Y2X7 761 aa3.8□□□□□ -1.8
CD47-203ENST00000398258 PTPDC1A2A3K4 754 aa3.79□□□□□ -1.8
CD47-203ENST00000398258 CAPN14A8MX76 684 aa3.79□□□□□ -1.8
CD47-203ENST00000398258 MAN2B1O00754 1011 aa3.79□□□□□ -1.8
CD47-203ENST00000398258 GAS7O60861 476 aa3.79□□□□□ -1.8
CD47-203ENST00000398258 FKBP9O95302 570 aa3.79□□□□□ -1.8
CD47-203ENST00000398258 PEX11BO96011 259 aa3.79□□□□□ -1.8
CD47-203ENST00000398258 ENO2P09104 434 aaPredicted RBP3.79□□□□□ -1.8
CD47-203ENST00000398258 ETV4P43268 484 aa3.79□□□□□ -1.8
CD47-203ENST00000398258 GUCY2FP51841 1108 aa3.79□□□□□ -1.8
CD47-203ENST00000398258 PHC1P78364 1004 aa3.79□□□□□ -1.8
CD47-203ENST00000398258 OCRLQ01968 901 aa3.79□□□□□ -1.8
CD47-203ENST00000398258 FAPQ12884 760 aa3.79□□□□□ -1.8
CD47-203ENST00000398258 GRM7Q14831 915 aa3.79□□□□□ -1.8
CD47-203ENST00000398258 GPR158Q5T848 1215 aa3.79□□□□□ -1.8
CD47-203ENST00000398258 FKBP9P1Q75LS8 142 aa3.79□□□□□ -1.8
CD47-203ENST00000398258 NOSTRINQ8IVI9 506 aa3.79□□□□□ -1.8
CD47-203ENST00000398258 TRIM48Q8IWZ4 208 aa3.79□□□□□ -1.8
CD47-203ENST00000398258 EFHBQ8N7U6 833 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms