RNA–Protein interactions for RNA: ENST00000397954.6

UBE3A-202, Transcript of ubiquitin protein ligase E3A, humanhuman

TSL 5 BASIC

Gene UBE3A, Length 2,873 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-202ENST00000397954 FAM86C2PA6NEL3 165 aa4.28□□□□□ -1.73
UBE3A-202ENST00000397954 IFIT3O14879 490 aaKnown RBP4.28□□□□□ -1.73
UBE3A-202ENST00000397954 FIBPO43427 364 aa4.28□□□□□ -1.73
UBE3A-202ENST00000397954 NRDCO43847 1150 aa4.28□□□□□ -1.73
UBE3A-202ENST00000397954 ADAMTS4O75173 837 aa4.28□□□□□ -1.73
UBE3A-202ENST00000397954 EYA4O95677 639 aa4.28□□□□□ -1.73
UBE3A-202ENST00000397954 GH1P01241 217 aa4.28□□□□□ -1.73
UBE3A-202ENST00000397954 CYP21A2P08686 494 aa4.28□□□□□ -1.73
UBE3A-202ENST00000397954 CYP2D6P10635 497 aa4.28□□□□□ -1.73
UBE3A-202ENST00000397954 IFNAR1P17181 557 aa4.28□□□□□ -1.73
UBE3A-202ENST00000397954 PMLP29590 882 aa4.28□□□□□ -1.73
UBE3A-202ENST00000397954 HOXC8P31273 242 aa4.28□□□□□ -1.73
UBE3A-202ENST00000397954 PHKA2P46019 1235 aa4.28□□□□□ -1.73
UBE3A-202ENST00000397954 USP11P51784 963 aa4.28□□□□□ -1.73
UBE3A-202ENST00000397954 HMGN5P82970 282 aaKnown RBP4.28□□□□□ -1.73
UBE3A-202ENST00000397954 SMAD3P84022 425 aaKnown RBP4.28□□□□□ -1.73
UBE3A-202ENST00000397954 PPIGQ13427 754 aaKnown RBP eCLIP4.28□□□□□ -1.732e-6■□□□□ 9.4
UBE3A-202ENST00000397954 PIN1Q13526 163 aaPredicted RBP4.28□□□□□ -1.73
UBE3A-202ENST00000397954 ACVR2BQ13705 512 aa4.28□□□□□ -1.73
UBE3A-202ENST00000397954 ZYXQ15942 572 aaKnown RBP4.28□□□□□ -1.73
UBE3A-202ENST00000397954 CDC37Q16543 378 aaPredicted RBP4.28□□□□□ -1.73
UBE3A-202ENST00000397954 TMEM67Q5HYA8 995 aa4.28□□□□□ -1.73
UBE3A-202ENST00000397954 KIAA0319Q5VV43 1072 aa4.28□□□□□ -1.73
UBE3A-202ENST00000397954 CNNM4Q6P4Q7 775 aa4.28□□□□□ -1.73
UBE3A-202ENST00000397954 BLOC1S2Q6QNY1 142 aa4.28□□□□□ -1.73
UBE3A-202ENST00000397954 SV2BQ7L1I2 683 aa4.28□□□□□ -1.73
UBE3A-202ENST00000397954 REC114Q7Z4M0 266 aa4.28□□□□□ -1.73
UBE3A-202ENST00000397954 NCAPG2Q86XI2 1143 aa4.28□□□□□ -1.73
UBE3A-202ENST00000397954 PPTC7Q8NI37 304 aa4.28□□□□□ -1.73
UBE3A-202ENST00000397954 SHISA4Q96DD7 197 aa4.28□□□□□ -1.73
UBE3A-202ENST00000397954 SCYL1Q96KG9 808 aa4.28□□□□□ -1.73
UBE3A-202ENST00000397954 FAM167AQ96KS9 214 aa4.28□□□□□ -1.73
UBE3A-202ENST00000397954 JPH2Q9BR39 696 aaPredicted RBP4.28□□□□□ -1.73
UBE3A-202ENST00000397954 MTG1Q9BT17 334 aaPredicted RBP4.28□□□□□ -1.73
UBE3A-202ENST00000397954 LDHAL6BQ9BYZ2 381 aaPredicted RBP4.28□□□□□ -1.73
UBE3A-202ENST00000397954 UPF2Q9HAU5 1272 aaKnown RBP4.28□□□□□ -1.73
UBE3A-202ENST00000397954 SCUBE2Q9NQ36 999 aa4.28□□□□□ -1.73
UBE3A-202ENST00000397954 ZSWIM5Q9P217 1185 aa4.28□□□□□ -1.73
UBE3A-202ENST00000397954 PPM1HQ9ULR3 514 aa4.28□□□□□ -1.73
UBE3A-202ENST00000397954 RWDD3Q9Y3V2 267 aa4.28□□□□□ -1.73
UBE3A-202ENST00000397954 SLC12A7Q9Y666 1083 aa4.28□□□□□ -1.73
UBE3A-202ENST00000397954 DOCK3Q8IZD9 2030 aa4.27□□□□□ -1.73
UBE3A-202ENST00000397954 A0A1W2PQH9 124 aa4.27□□□□□ -1.73
UBE3A-202ENST00000397954 ADH1CP00326 375 aa4.27□□□□□ -1.73
UBE3A-202ENST00000397954 ADH1AP07327 375 aa4.27□□□□□ -1.73
UBE3A-202ENST00000397954 RPS6KB1P23443 525 aa4.27□□□□□ -1.73
UBE3A-202ENST00000397954 CIITAP33076 1130 aa4.27□□□□□ -1.73
UBE3A-202ENST00000397954 SOX5P35711 763 aa4.27□□□□□ -1.73
UBE3A-202ENST00000397954 TRAPPC10P48553 1259 aa4.27□□□□□ -1.73
UBE3A-202ENST00000397954 HTRA3P83110 453 aa4.27□□□□□ -1.73
UBE3A-202ENST00000397954 CACNB2Q08289 660 aaPredicted RBP4.27□□□□□ -1.73
UBE3A-202ENST00000397954 BFSP2Q13515 415 aa4.27□□□□□ -1.73
UBE3A-202ENST00000397954 C4orf17Q53FE4 359 aa4.27□□□□□ -1.73
UBE3A-202ENST00000397954 TJAP1Q5JTD0 557 aa4.27□□□□□ -1.73
UBE3A-202ENST00000397954 IL31Q6EBC2 164 aa4.27□□□□□ -1.73
UBE3A-202ENST00000397954 PDZRN4Q6ZMN7 1036 aaPredicted RBP4.27□□□□□ -1.73
UBE3A-202ENST00000397954 RUFY3Q7L099 469 aa4.27□□□□□ -1.73
UBE3A-202ENST00000397954 ARMCX2Q7L311 632 aa4.27□□□□□ -1.73
UBE3A-202ENST00000397954 SMAP1Q8IYB5 467 aaPredicted RBP4.27□□□□□ -1.73
UBE3A-202ENST00000397954 TRIM22Q8IYM9 498 aa4.27□□□□□ -1.73
UBE3A-202ENST00000397954 ZNF687Q8N1G0 1237 aa4.27□□□□□ -1.73
UBE3A-202ENST00000397954 ZSWIM2Q8NEG5 633 aa4.27□□□□□ -1.73
UBE3A-202ENST00000397954 AFAP1L1Q8TED9 768 aa4.27□□□□□ -1.73
UBE3A-202ENST00000397954 CLEC4DQ8WXI8 215 aa4.27□□□□□ -1.73
UBE3A-202ENST00000397954 GATAD2BQ8WXI9 593 aa4.27□□□□□ -1.73
UBE3A-202ENST00000397954 EXOC2Q96KP1 924 aa4.27□□□□□ -1.73
UBE3A-202ENST00000397954 CNTNAP3BQ96NU0 1288 aa4.27□□□□□ -1.73
UBE3A-202ENST00000397954 CNTNAP3Q9BZ76 1288 aa4.27□□□□□ -1.73
UBE3A-202ENST00000397954 C6orf50Q9HD87 102 aa4.27□□□□□ -1.73
UBE3A-202ENST00000397954 TXNRD2Q9NNW7 524 aa4.27□□□□□ -1.73
UBE3A-202ENST00000397954 LMCD1Q9NZU5 365 aa4.27□□□□□ -1.73
UBE3A-202ENST00000397954 STX8Q9UNK0 236 aa4.27□□□□□ -1.73
UBE3A-202ENST00000397954 DAAM1Q9Y4D1 1078 aa4.27□□□□□ -1.73
UBE3A-202ENST00000397954 CYP46A1Q9Y6A2 500 aa4.27□□□□□ -1.73
UBE3A-202ENST00000397954 RRN3P2A6NIE6 340 aa4.27□□□□□ -1.73
UBE3A-202ENST00000397954 LAD1O00515 517 aa4.27□□□□□ -1.73
UBE3A-202ENST00000397954 ZBTB43O43298 467 aa4.27□□□□□ -1.73
UBE3A-202ENST00000397954 RGS20O76081 388 aa4.27□□□□□ -1.73
UBE3A-202ENST00000397954 DEXIO95424 95 aa4.27□□□□□ -1.73
UBE3A-202ENST00000397954 BMP15O95972 392 aa4.27□□□□□ -1.73
UBE3A-202ENST00000397954 SFNP31947 248 aa4.27□□□□□ -1.73
UBE3A-202ENST00000397954 CDK7P50613 346 aa4.27□□□□□ -1.73
UBE3A-202ENST00000397954 JAG1P78504 1218 aa4.27□□□□□ -1.73
UBE3A-202ENST00000397954 LSM11P83369 360 aaKnown RBP eCLIP4.27□□□□□ -1.73
UBE3A-202ENST00000397954 RELBQ01201 579 aa4.27□□□□□ -1.73
UBE3A-202ENST00000397954 FAAP100Q0VG06 881 aa4.27□□□□□ -1.73
UBE3A-202ENST00000397954 SPRED3Q2MJR0 410 aa4.27□□□□□ -1.73
UBE3A-202ENST00000397954 LRRTM3Q86VH5 581 aa4.27□□□□□ -1.73
UBE3A-202ENST00000397954 SYNPOQ8N3V7 929 aa4.27□□□□□ -1.73
UBE3A-202ENST00000397954 ST13P5Q8NFI4 369 aaPredicted RBP4.27□□□□□ -1.73
UBE3A-202ENST00000397954 SVIPQ8NHG7 77 aa4.27□□□□□ -1.73
UBE3A-202ENST00000397954 RHBDD1Q8TEB9 315 aa4.27□□□□□ -1.73
UBE3A-202ENST00000397954 COG1Q8WTW3 980 aa4.27□□□□□ -1.73
UBE3A-202ENST00000397954 LEO1Q8WVC0 666 aaPredicted RBP4.27□□□□□ -1.73
UBE3A-202ENST00000397954 NECAB3Q96P71 396 aaPredicted RBP4.27□□□□□ -1.73
UBE3A-202ENST00000397954 INPP4AQ96PE3 977 aaPredicted RBP4.27□□□□□ -1.73
UBE3A-202ENST00000397954 PLCD4Q9BRC7 762 aa4.27□□□□□ -1.73
UBE3A-202ENST00000397954 ZKSCAN3Q9BRR0 538 aa4.27□□□□□ -1.73
UBE3A-202ENST00000397954 RNF208Q9H0X6 261 aa4.27□□□□□ -1.73
UBE3A-202ENST00000397954 LIN7BQ9HAP6 207 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms