RNA–Protein interactions for RNA: ENST00000397760.8

PDLIM2-204, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-204ENST00000397760 DUSP9Q99956 384 aaKnown RBP21.24■□□□□ 0.99
PDLIM2-204ENST00000397760 TUT1Q9H6E5 874 aaKnown RBP21.24■□□□□ 0.99
PDLIM2-204ENST00000397760 TSKSQ9UJT2 592 aa21.24■□□□□ 0.99
PDLIM2-204ENST00000397760 MYH9P35579 1960 aaKnown RBP21.24■□□□□ 0.99
PDLIM2-204ENST00000397760 A0A1B0GTH6 734 aa21.23■□□□□ 0.99
PDLIM2-204ENST00000397760 ZBTB42B2RXF5 422 aa21.23■□□□□ 0.99
PDLIM2-204ENST00000397760 EIF3DO15371 548 aaKnown RBP eCLIP21.23■□□□□ 0.99
PDLIM2-204ENST00000397760 DUSP11O75319 330 aaKnown RBP21.23■□□□□ 0.99
PDLIM2-204ENST00000397760 MAFO75444 373 aaPredicted RBP21.23■□□□□ 0.99
PDLIM2-204ENST00000397760 CPT1AP50416 773 aa21.23■□□□□ 0.99
PDLIM2-204ENST00000397760 PEX3P56589 373 aa21.23■□□□□ 0.99
PDLIM2-204ENST00000397760 IRX5P78411 483 aaPredicted RBP21.23■□□□□ 0.99
PDLIM2-204ENST00000397760 NR1I3Q14994 352 aa21.23■□□□□ 0.99
PDLIM2-204ENST00000397760 ZC2HC1CQ53FD0 456 aaPredicted RBP21.23■□□□□ 0.99
PDLIM2-204ENST00000397760 BRDTQ58F21 947 aaPredicted RBP21.23■□□□□ 0.99
PDLIM2-204ENST00000397760 REXO1L1PQ8IX06 675 aa21.23■□□□□ 0.99
PDLIM2-204ENST00000397760 CSGALNACT2Q8N6G5 542 aa21.23■□□□□ 0.99
PDLIM2-204ENST00000397760 TMEM143Q96AN5 459 aa21.23■□□□□ 0.99
PDLIM2-204ENST00000397760 CTAGE1Q96RT6 745 aa21.23■□□□□ 0.99
PDLIM2-204ENST00000397760 TSG101Q99816 390 aa21.23■□□□□ 0.99
PDLIM2-204ENST00000397760 BAG1Q99933 345 aaPredicted RBP21.23■□□□□ 0.99
PDLIM2-204ENST00000397760 POLR3FQ9H1D9 316 aaPredicted RBP21.23■□□□□ 0.99
PDLIM2-204ENST00000397760 C17orf75Q9HAS0 396 aa21.23■□□□□ 0.99
PDLIM2-204ENST00000397760 PCDHB13Q9Y5F0 798 aa21.23■□□□□ 0.99
PDLIM2-204ENST00000397760 K7ENM7 598 aa21.22■□□□□ 0.99
PDLIM2-204ENST00000397760 SEPT4O43236 478 aa21.22■□□□□ 0.99
PDLIM2-204ENST00000397760 PRKAR2AP13861 404 aaKnown RBP21.22■□□□□ 0.99
PDLIM2-204ENST00000397760 RTP1P59025 263 aa21.22■□□□□ 0.99
PDLIM2-204ENST00000397760 LRRC63Q05C16 580 aa21.22■□□□□ 0.99
PDLIM2-204ENST00000397760 KNOP1Q1ED39 458 aaKnown RBP21.22■□□□□ 0.99
PDLIM2-204ENST00000397760 BMT2Q1RMZ1 405 aa21.22■□□□□ 0.99
PDLIM2-204ENST00000397760 CDKAL1Q5VV42 579 aa21.22■□□□□ 0.99
PDLIM2-204ENST00000397760 TRIM65Q6PJ69 517 aa21.22■□□□□ 0.99
PDLIM2-204ENST00000397760 EXOC8Q8IYI6 725 aa21.22■□□□□ 0.99
PDLIM2-204ENST00000397760 KCTD10Q9H3F6 313 aa21.22■□□□□ 0.99
PDLIM2-204ENST00000397760 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP21.22■□□□□ 0.99
PDLIM2-204ENST00000397760 HMGCRP04035 888 aa21.22■□□□□ 0.99
PDLIM2-204ENST00000397760 HOXD13P35453 343 aa21.22■□□□□ 0.99
PDLIM2-204ENST00000397760 SMTNP53814 917 aa21.22■□□□□ 0.99
PDLIM2-204ENST00000397760 CBX1P83916 185 aa21.22■□□□□ 0.99
PDLIM2-204ENST00000397760 DMP1Q13316 513 aaPredicted RBP21.22■□□□□ 0.99
PDLIM2-204ENST00000397760 PXYLP1Q8TE99 480 aa21.22■□□□□ 0.99
PDLIM2-204ENST00000397760 BSNDQ8WZ55 320 aa21.22■□□□□ 0.99
PDLIM2-204ENST00000397760 CCDC169A6NNP5 214 aa21.21■□□□□ 0.99
PDLIM2-204ENST00000397760 INSRRP14616 1297 aa21.21■□□□□ 0.99
PDLIM2-204ENST00000397760 NPTX2P47972 431 aa21.21■□□□□ 0.99
PDLIM2-204ENST00000397760 BEX3Q00994 111 aa21.21■□□□□ 0.99
PDLIM2-204ENST00000397760 KCNA1Q09470 495 aa21.21■□□□□ 0.99
PDLIM2-204ENST00000397760 ZNF484Q5JVG2 852 aa21.21■□□□□ 0.99
PDLIM2-204ENST00000397760 FOXR2Q6PJQ5 311 aa21.21■□□□□ 0.99
PDLIM2-204ENST00000397760 TC2NQ8N9U0 490 aa21.21■□□□□ 0.99
PDLIM2-204ENST00000397760 SLC17A8Q8NDX2 589 aa21.21■□□□□ 0.99
PDLIM2-204ENST00000397760 NOC3LQ8WTT2 800 aaKnown RBP21.21■□□□□ 0.99
PDLIM2-204ENST00000397760 TRAPPC12Q8WVT3 735 aa21.21■□□□□ 0.99
PDLIM2-204ENST00000397760 SPIRE2Q8WWL2 714 aa21.21■□□□□ 0.99
PDLIM2-204ENST00000397760 IFT74Q96LB3 600 aa21.21■□□□□ 0.99
PDLIM2-204ENST00000397760 PANX2Q96RD6 677 aa21.21■□□□□ 0.99
PDLIM2-204ENST00000397760 ARID3AQ99856 593 aa21.21■□□□□ 0.99
PDLIM2-204ENST00000397760 STRA6Q9BX79 667 aa21.21■□□□□ 0.99
PDLIM2-204ENST00000397760 NAA15Q9BXJ9 866 aaKnown RBP21.21■□□□□ 0.99
PDLIM2-204ENST00000397760 PCNTO95613 3336 aa21.2■□□□□ 0.98
PDLIM2-204ENST00000397760 SLC16A4O15374 487 aa21.2■□□□□ 0.98
PDLIM2-204ENST00000397760 ARL2P36404 184 aa21.2■□□□□ 0.98
PDLIM2-204ENST00000397760 NCKAP1LP55160 1127 aa21.2■□□□□ 0.98
PDLIM2-204ENST00000397760 PRMT2P55345 433 aa21.2■□□□□ 0.98
PDLIM2-204ENST00000397760 NAA30Q147X3 362 aaPredicted RBP21.2■□□□□ 0.98
PDLIM2-204ENST00000397760 FSCN1Q16658 493 aaKnown RBP21.2■□□□□ 0.98
PDLIM2-204ENST00000397760 ZCWPW2Q504Y3 356 aa21.2■□□□□ 0.98
PDLIM2-204ENST00000397760 HAUS6Q7Z4H7 955 aa21.2■□□□□ 0.98
PDLIM2-204ENST00000397760 KSR1Q8IVT5 923 aa21.2■□□□□ 0.98
PDLIM2-204ENST00000397760 JPH2Q9BR39 696 aaPredicted RBP21.2■□□□□ 0.98
PDLIM2-204ENST00000397760 NTPCRQ9BSD7 190 aaKnown RBP21.2■□□□□ 0.98
PDLIM2-204ENST00000397760 ST6GALNAC4Q9H4F1 302 aa21.2■□□□□ 0.98
PDLIM2-204ENST00000397760 THAP9Q9H5L6 903 aa21.2■□□□□ 0.98
PDLIM2-204ENST00000397760 PPP2R2CQ9Y2T4 447 aa21.2■□□□□ 0.98
PDLIM2-204ENST00000397760 UBE4BO95155 1302 aa21.2■□□□□ 0.98
PDLIM2-204ENST00000397760 PPP1R37O75864 691 aa21.2■□□□□ 0.98
PDLIM2-204ENST00000397760 TPM1P09493 284 aa21.2■□□□□ 0.98
PDLIM2-204ENST00000397760 RARBP10826 455 aa21.2■□□□□ 0.98
PDLIM2-204ENST00000397760 ZSCAN20P17040 1043 aaPredicted RBP21.2■□□□□ 0.98
PDLIM2-204ENST00000397760 CCND3P30281 292 aaPredicted RBP21.2■□□□□ 0.98
PDLIM2-204ENST00000397760 GJA9P57773 515 aa21.2■□□□□ 0.98
PDLIM2-204ENST00000397760 IGBP1P78318 339 aa21.2■□□□□ 0.98
PDLIM2-204ENST00000397760 ALCAMQ13740 583 aa21.2■□□□□ 0.98
PDLIM2-204ENST00000397760 SUGCTQ9HAC7 445 aa21.2■□□□□ 0.98
PDLIM2-204ENST00000397760 KMT5AQ9NQR1 393 aa21.2■□□□□ 0.98
PDLIM2-204ENST00000397760 KCNG1Q9UIX4 513 aa21.2■□□□□ 0.98
PDLIM2-204ENST00000397760 IGKV6-21A0A0C4DH24 114 aa21.19■□□□□ 0.98
PDLIM2-204ENST00000397760 GAS2O43903 313 aaKnown RBP21.19■□□□□ 0.98
PDLIM2-204ENST00000397760 F2P00734 622 aa21.19■□□□□ 0.98
PDLIM2-204ENST00000397760 MYL3P08590 195 aa21.19■□□□□ 0.98
PDLIM2-204ENST00000397760 C6orf222P0C671 652 aaPredicted RBP21.19■□□□□ 0.98
PDLIM2-204ENST00000397760 DMTNQ08495 405 aa21.19■□□□□ 0.98
PDLIM2-204ENST00000397760 PPP4R3CPQ6ZMV5 832 aa21.19■□□□□ 0.98
PDLIM2-204ENST00000397760 ASAP3Q8TDY4 903 aa21.19■□□□□ 0.98
PDLIM2-204ENST00000397760 KAT2BQ92831 832 aa21.19■□□□□ 0.98
PDLIM2-204ENST00000397760 EEF2KMTQ96G04 330 aa21.19■□□□□ 0.98
PDLIM2-204ENST00000397760 DNAI1Q9UI46 699 aa21.19■□□□□ 0.98
PDLIM2-204ENST00000397760 CASP8AP2Q9UKL3 1982 aa21.19■□□□□ 0.98
PDLIM2-204ENST00000397760 ARID2Q68CP9 1835 aa21.18■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms