RNA–Protein interactions for RNA: ENST00000397204.8

CAPN3-208, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,237 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-208ENST00000397204 CLK2P49760 499 aaKnown RBP9.93□□□□□ -0.82
CAPN3-208ENST00000397204 KRT17Q04695 432 aa9.93□□□□□ -0.82
CAPN3-208ENST00000397204 SIGLEC14Q08ET2 396 aa9.93□□□□□ -0.82
CAPN3-208ENST00000397204 KCNC3Q14003 757 aa9.93□□□□□ -0.82
CAPN3-208ENST00000397204 DSC3Q14574 896 aa9.93□□□□□ -0.82
CAPN3-208ENST00000397204 RTN1Q16799 776 aa9.93□□□□□ -0.82
CAPN3-208ENST00000397204 KIZQ2M2Z5 673 aa9.93□□□□□ -0.82
CAPN3-208ENST00000397204 TSGA10IPQ3SY00 556 aa9.93□□□□□ -0.82
CAPN3-208ENST00000397204 ZNF746Q6NUN9 644 aaPredicted RBP9.93□□□□□ -0.82
CAPN3-208ENST00000397204 DHX32Q7L7V1 743 aaKnown RBP9.93□□□□□ -0.82
CAPN3-208ENST00000397204 CCDC60Q8IWA6 550 aaPredicted RBP9.93□□□□□ -0.82
CAPN3-208ENST00000397204 CKAP2LQ8IYA6 745 aa9.93□□□□□ -0.82
CAPN3-208ENST00000397204 SMAP1Q8IYB5 467 aaPredicted RBP9.93□□□□□ -0.82
CAPN3-208ENST00000397204 COLGALT1Q8NBJ5 622 aa9.93□□□□□ -0.82
CAPN3-208ENST00000397204 TMEM40Q8WWA1 233 aa9.93□□□□□ -0.82
CAPN3-208ENST00000397204 CRYGNQ8WXF5 182 aa9.93□□□□□ -0.82
CAPN3-208ENST00000397204 MRPS27Q92552 414 aaKnown RBP9.93□□□□□ -0.82
CAPN3-208ENST00000397204 PGBD1Q96JS3 809 aa9.93□□□□□ -0.82
CAPN3-208ENST00000397204 RPGRIP1Q96KN7 1286 aa9.93□□□□□ -0.82
CAPN3-208ENST00000397204 YTHDC1Q96MU7 727 aaKnown RBP9.93□□□□□ -0.82
CAPN3-208ENST00000397204 REPIN1Q9BWE0 567 aaKnown RBP9.93□□□□□ -0.82
CAPN3-208ENST00000397204 TMEM117Q9H0C3 514 aa9.93□□□□□ -0.82
CAPN3-208ENST00000397204 IRF2BPLQ9H1B7 796 aa9.93□□□□□ -0.82
CAPN3-208ENST00000397204 S1PR5Q9H228 398 aa9.93□□□□□ -0.82
CAPN3-208ENST00000397204 CWH43Q9H720 699 aa9.93□□□□□ -0.82
CAPN3-208ENST00000397204 CEP131Q9UPN4 1083 aa9.93□□□□□ -0.82
CAPN3-208ENST00000397204 PCDHGC5Q9Y5F6 944 aa9.93□□□□□ -0.82
CAPN3-208ENST00000397204 PCDHA10Q9Y5I2 948 aa9.93□□□□□ -0.82
CAPN3-208ENST00000397204 CNTNAP5Q8WYK1 1306 aa9.92□□□□□ -0.82
CAPN3-208ENST00000397204 IGLV3-22A0A075B6J6 115 aa9.92□□□□□ -0.82
CAPN3-208ENST00000397204 CCDC196A0A1B0GTZ2 297 aa9.92□□□□□ -0.82
CAPN3-208ENST00000397204 FAM86B1E9PN63 330 aa9.92□□□□□ -0.82
CAPN3-208ENST00000397204 DDX39AO00148 427 aaKnown RBP9.92□□□□□ -0.82
CAPN3-208ENST00000397204 NR1I2O75469 434 aa9.92□□□□□ -0.82
CAPN3-208ENST00000397204 C22orf31O95567 290 aa9.92□□□□□ -0.82
CAPN3-208ENST00000397204 FAM86B2P0C5J1 330 aa9.92□□□□□ -0.82
CAPN3-208ENST00000397204 ZSCAN20P17040 1043 aaPredicted RBP9.92□□□□□ -0.82
CAPN3-208ENST00000397204 IBSPP21815 317 aaPredicted RBP9.92□□□□□ -0.82
CAPN3-208ENST00000397204 EIF4BP23588 611 aaKnown RBP9.92□□□□□ -0.82
CAPN3-208ENST00000397204 TMOD1P28289 359 aa9.92□□□□□ -0.82
CAPN3-208ENST00000397204 RCAN1P53805 252 aa9.92□□□□□ -0.82
CAPN3-208ENST00000397204 ANKRD54Q6NXT1 300 aa9.92□□□□□ -0.82
CAPN3-208ENST00000397204 KCNT2Q6UVM3 1135 aa9.92□□□□□ -0.82
CAPN3-208ENST00000397204 FAM228AQ86W67 206 aa9.92□□□□□ -0.82
CAPN3-208ENST00000397204 METTL13Q8N6R0 699 aa9.92□□□□□ -0.82
CAPN3-208ENST00000397204 PRSS33Q8NF86 280 aa9.92□□□□□ -0.82
CAPN3-208ENST00000397204 VN1R2Q8NFZ6 395 aa9.92□□□□□ -0.82
CAPN3-208ENST00000397204 CASD1Q96PB1 797 aa9.92□□□□□ -0.82
CAPN3-208ENST00000397204 ZNF577Q9BSK1 485 aa9.92□□□□□ -0.82
CAPN3-208ENST00000397204 TMUB1Q9BVT8 246 aa9.92□□□□□ -0.82
CAPN3-208ENST00000397204 ANO2Q9NQ90 1003 aa9.92□□□□□ -0.82
CAPN3-208ENST00000397204 NRBP2Q9NSY0 501 aa9.92□□□□□ -0.82
CAPN3-208ENST00000397204 FAM217BQ9NTX9 383 aaPredicted RBP9.92□□□□□ -0.82
CAPN3-208ENST00000397204 SPG21Q9NZD8 308 aa9.92□□□□□ -0.82
CAPN3-208ENST00000397204 BRPF3Q9ULD4 1205 aa9.92□□□□□ -0.82
CAPN3-208ENST00000397204 ESYT2A0FGR8 921 aa9.91□□□□□ -0.82
CAPN3-208ENST00000397204 EOMESO95936 686 aa9.91□□□□□ -0.82
CAPN3-208ENST00000397204 VTNP04004 478 aa9.91□□□□□ -0.82
CAPN3-208ENST00000397204 PSAPP07602 524 aa9.91□□□□□ -0.82
CAPN3-208ENST00000397204 HMGB1P09429 215 aaKnown RBP9.91□□□□□ -0.82
CAPN3-208ENST00000397204 FGFR1P11362 822 aa9.91□□□□□ -0.82
CAPN3-208ENST00000397204 PPM1AP35813 382 aa9.91□□□□□ -0.82
CAPN3-208ENST00000397204 TECP42680 631 aa9.91□□□□□ -0.82
CAPN3-208ENST00000397204 NLRP11P59045 1033 aaKnown RBP9.91□□□□□ -0.82
CAPN3-208ENST00000397204 RBM10P98175 930 aaKnown RBP9.91□□□□□ -0.82
CAPN3-208ENST00000397204 CDC42EP1Q00587 391 aa9.91□□□□□ -0.82
CAPN3-208ENST00000397204 SETQ01105 290 aaPredicted RBP9.91□□□□□ -0.82
CAPN3-208ENST00000397204 KRT32Q14532 448 aa9.91□□□□□ -0.82
CAPN3-208ENST00000397204 PFKFB3Q16875 520 aaPredicted RBP9.91□□□□□ -0.82
CAPN3-208ENST00000397204 JAKMIP3Q5VZ66 844 aa9.91□□□□□ -0.82
CAPN3-208ENST00000397204 SYCE2Q6PIF2 218 aa9.91□□□□□ -0.82
CAPN3-208ENST00000397204 TMC7Q7Z402 723 aa9.91□□□□□ -0.82
CAPN3-208ENST00000397204 ABI1Q8IZP0 508 aa9.91□□□□□ -0.82
CAPN3-208ENST00000397204 MRPL43Q8N983 215 aaKnown RBP9.91□□□□□ -0.82
CAPN3-208ENST00000397204 CCDC12Q8WUD4 166 aaPredicted RBP9.91□□□□□ -0.82
CAPN3-208ENST00000397204 FAM167AQ96KS9 214 aa9.91□□□□□ -0.82
CAPN3-208ENST00000397204 ZNF558Q96NG5 402 aa9.91□□□□□ -0.82
CAPN3-208ENST00000397204 MAP7D2Q96T17 732 aa9.91□□□□□ -0.82
CAPN3-208ENST00000397204 OSMRQ99650 979 aa9.91□□□□□ -0.82
CAPN3-208ENST00000397204 ZMYND12Q9H0C1 365 aa9.91□□□□□ -0.82
CAPN3-208ENST00000397204 ADAMTS10Q9H324 1103 aa9.91□□□□□ -0.82
CAPN3-208ENST00000397204 C6orf50Q9HD87 102 aa9.91□□□□□ -0.82
CAPN3-208ENST00000397204 TCEAL9Q9UHQ7 104 aa9.91□□□□□ -0.82
CAPN3-208ENST00000397204 SPTBN4Q9H254 2564 aa9.91□□□□□ -0.82
CAPN3-208ENST00000397204 A0A0U1RQF3 1178 aa9.9□□□□□ -0.82
CAPN3-208ENST00000397204 GOLGA8AA7E2F4 631 aa9.9□□□□□ -0.82
CAPN3-208ENST00000397204 GOLGA8BA8MQT2 603 aa9.9□□□□□ -0.82
CAPN3-208ENST00000397204 HIDE1A8MVS5 230 aa9.9□□□□□ -0.82
CAPN3-208ENST00000397204 GNA11P29992 359 aa9.9□□□□□ -0.82
CAPN3-208ENST00000397204 AVPR2P30518 371 aa9.9□□□□□ -0.82
CAPN3-208ENST00000397204 CIITAP33076 1130 aa9.9□□□□□ -0.82
CAPN3-208ENST00000397204 ADD1P35611 737 aaKnown RBP9.9□□□□□ -0.82
CAPN3-208ENST00000397204 ITIH3Q06033 890 aa9.9□□□□□ -0.82
CAPN3-208ENST00000397204 APOBRQ0VD83 1088 aa9.9□□□□□ -0.82
CAPN3-208ENST00000397204 BMS1Q14692 1282 aaKnown RBP9.9□□□□□ -0.82
CAPN3-208ENST00000397204 AMHR2Q16671 573 aa9.9□□□□□ -0.82
CAPN3-208ENST00000397204 PTPN21Q16825 1174 aa9.9□□□□□ -0.82
CAPN3-208ENST00000397204 TPRNQ4KMQ1 711 aa9.9□□□□□ -0.82
CAPN3-208ENST00000397204 EFCAB12Q6NXP0 572 aa9.9□□□□□ -0.82
CAPN3-208ENST00000397204 LRRC55Q6ZSA7 311 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms