RNA–Protein interactions for RNA: ENST00000397200.8

CAPN3-207, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-207ENST00000397200 STX10O60499 249 aa16.42■□□□□ 0.22
CAPN3-207ENST00000397200 SMIM10L2AP0DMW4 78 aa16.42■□□□□ 0.22
CAPN3-207ENST00000397200 SMIM10L2BP0DMW5 78 aa16.42■□□□□ 0.22
CAPN3-207ENST00000397200 CCNE1P24864 410 aa16.42■□□□□ 0.22
CAPN3-207ENST00000397200 EEF1GP26641 437 aaKnown RBP16.42■□□□□ 0.22
CAPN3-207ENST00000397200 RFC5P40937 340 aa16.42■□□□□ 0.22
CAPN3-207ENST00000397200 POLGP54098 1239 aaPredicted RBP16.42■□□□□ 0.22
CAPN3-207ENST00000397200 PMS1P54277 932 aaKnown RBP16.42■□□□□ 0.22
CAPN3-207ENST00000397200 IGBP1P78318 339 aa16.42■□□□□ 0.22
CAPN3-207ENST00000397200 TBC1D8BQ0IIM8 1120 aa16.42■□□□□ 0.22
CAPN3-207ENST00000397200 KCNJ12Q14500 433 aa16.42■□□□□ 0.22
CAPN3-207ENST00000397200 PTPN21Q16825 1174 aa16.42■□□□□ 0.22
CAPN3-207ENST00000397200 ARSHQ5FYA8 562 aa16.42■□□□□ 0.22
CAPN3-207ENST00000397200 FOXR2Q6PJQ5 311 aa16.42■□□□□ 0.22
CAPN3-207ENST00000397200 C1orf186Q6ZWK4 172 aa16.42■□□□□ 0.22
CAPN3-207ENST00000397200 DYMQ7RTS9 669 aa16.42■□□□□ 0.22
CAPN3-207ENST00000397200 EXOC8Q8IYI6 725 aa16.42■□□□□ 0.22
CAPN3-207ENST00000397200 C7orf31Q8N865 590 aa16.42■□□□□ 0.22
CAPN3-207ENST00000397200 SLC7A3Q8WY07 619 aa16.42■□□□□ 0.22
CAPN3-207ENST00000397200 DDX12PQ92771 950 aa16.42■□□□□ 0.22
CAPN3-207ENST00000397200 GLT1D1Q96MS3 346 aa16.42■□□□□ 0.22
CAPN3-207ENST00000397200 PANX2Q96RD6 677 aa16.42■□□□□ 0.22
CAPN3-207ENST00000397200 TMEM106CQ9BVX2 250 aa16.42■□□□□ 0.22
CAPN3-207ENST00000397200 ATP6V0A4Q9HBG4 840 aa16.42■□□□□ 0.22
CAPN3-207ENST00000397200 PHF24Q9UPV7 400 aa16.42■□□□□ 0.22
CAPN3-207ENST00000397200 PAXBP1Q9Y5B6 917 aa16.42■□□□□ 0.22
CAPN3-207ENST00000397200 TRIM49BA6NDI0 452 aa16.41■□□□□ 0.22
CAPN3-207ENST00000397200 RRN3P2A6NIE6 340 aa16.41■□□□□ 0.22
CAPN3-207ENST00000397200 TUBB4AP04350 444 aa16.41■□□□□ 0.22
CAPN3-207ENST00000397200 RAD51AP2Q09MP3 1159 aa16.41■□□□□ 0.22
CAPN3-207ENST00000397200 PTPN14Q15678 1187 aa16.41■□□□□ 0.22
CAPN3-207ENST00000397200 GRIK4Q16099 956 aa16.41■□□□□ 0.22
CAPN3-207ENST00000397200 NBPF20Q3BBV1 942 aa16.41■□□□□ 0.22
CAPN3-207ENST00000397200 KIAA0895Q8NCT3 520 aa16.41■□□□□ 0.22
CAPN3-207ENST00000397200 ANKRD20A12PQ8NF67 263 aa16.41■□□□□ 0.22
CAPN3-207ENST00000397200 TRAPPC12Q8WVT3 735 aa16.41■□□□□ 0.22
CAPN3-207ENST00000397200 P2RX5Q93086 422 aa16.41■□□□□ 0.22
CAPN3-207ENST00000397200 DUSP9Q99956 384 aaKnown RBP16.41■□□□□ 0.22
CAPN3-207ENST00000397200 JPH2Q9BR39 696 aaPredicted RBP16.41■□□□□ 0.22
CAPN3-207ENST00000397200 NRCAMQ92823 1304 aa16.41■□□□□ 0.22
CAPN3-207ENST00000397200 MYH11P35749 1972 aa16.41■□□□□ 0.22
CAPN3-207ENST00000397200 NPHP3-ACAD11A0A0J9YXS1 232 aa16.41■□□□□ 0.22
CAPN3-207ENST00000397200 A0A1W2PQ45 241 aaPredicted RBP16.41■□□□□ 0.22
CAPN3-207ENST00000397200 A0A1W2PQY0 241 aa16.41■□□□□ 0.22
CAPN3-207ENST00000397200 BICDL2A1A5D9 508 aa16.41■□□□□ 0.22
CAPN3-207ENST00000397200 GUCY2CP25092 1073 aa16.41■□□□□ 0.22
CAPN3-207ENST00000397200 GJA8P48165 433 aa16.41■□□□□ 0.22
CAPN3-207ENST00000397200 STK4Q13043 487 aa16.41■□□□□ 0.22
CAPN3-207ENST00000397200 EMC2Q15006 297 aa16.41■□□□□ 0.22
CAPN3-207ENST00000397200 CEP135Q66GS9 1140 aa16.41■□□□□ 0.22
CAPN3-207ENST00000397200 MCPH1Q8NEM0 835 aa16.41■□□□□ 0.22
CAPN3-207ENST00000397200 PPP1R13LQ8WUF5 828 aa16.41■□□□□ 0.22
CAPN3-207ENST00000397200 CEP89Q96ST8 783 aa16.41■□□□□ 0.22
CAPN3-207ENST00000397200 BAG1Q99933 345 aaPredicted RBP16.41■□□□□ 0.22
CAPN3-207ENST00000397200 REEP2Q9BRK0 252 aa16.41■□□□□ 0.22
CAPN3-207ENST00000397200 TIPINQ9BVW5 301 aa16.41■□□□□ 0.22
CAPN3-207ENST00000397200 DHX33Q9H6R0 707 aaKnown RBP16.41■□□□□ 0.22
CAPN3-207ENST00000397200 SETD4Q9NVD3 440 aa16.41■□□□□ 0.22
CAPN3-207ENST00000397200 MAPK8IP1Q9UQF2 711 aa16.41■□□□□ 0.22
CAPN3-207ENST00000397200 C17orf102A2RUQ5 167 aa16.4■□□□□ 0.22
CAPN3-207ENST00000397200 AKR1B15C9JRZ8 316 aaPredicted RBP16.4■□□□□ 0.22
CAPN3-207ENST00000397200 RIOK3O14730 519 aaKnown RBP16.4■□□□□ 0.22
CAPN3-207ENST00000397200 TBCAO75347 108 aaKnown RBP16.4■□□□□ 0.22
CAPN3-207ENST00000397200 MAFO75444 373 aaPredicted RBP16.4■□□□□ 0.22
CAPN3-207ENST00000397200 CACNB1Q02641 598 aaPredicted RBP16.4■□□□□ 0.22
CAPN3-207ENST00000397200 GOLGA8FQ08AF8 430 aa16.4■□□□□ 0.22
CAPN3-207ENST00000397200 GOLGA8DPQ0D2H9 430 aa16.4■□□□□ 0.22
CAPN3-207ENST00000397200 TRIM14Q14142 442 aa16.4■□□□□ 0.22
CAPN3-207ENST00000397200 GIT2Q14161 759 aa16.4■□□□□ 0.22
CAPN3-207ENST00000397200 FAM47CQ5HY64 1035 aa16.4■□□□□ 0.22
CAPN3-207ENST00000397200 MAEAQ7L5Y9 396 aa16.4■□□□□ 0.22
CAPN3-207ENST00000397200 LMBR1Q8WVP7 490 aa16.4■□□□□ 0.22
CAPN3-207ENST00000397200 DNAJC19Q96DA6 116 aa16.4■□□□□ 0.22
CAPN3-207ENST00000397200 CCDC51Q96ER9 411 aa16.4■□□□□ 0.22
CAPN3-207ENST00000397200 STARD7Q9NQZ5 370 aa16.4■□□□□ 0.22
CAPN3-207ENST00000397200 HDAC6Q9UBN7 1215 aa16.4■□□□□ 0.22
CAPN3-207ENST00000397200 LGALS16A8MUM7 142 aa16.39■□□□□ 0.21
CAPN3-207ENST00000397200 MAGEB2O15479 319 aa16.39■□□□□ 0.21
CAPN3-207ENST00000397200 MFAP3LO75121 409 aa16.39■□□□□ 0.21
CAPN3-207ENST00000397200 HIP1RO75146 1068 aa16.39■□□□□ 0.21
CAPN3-207ENST00000397200 C22orf31O95567 290 aa16.39■□□□□ 0.21
CAPN3-207ENST00000397200 GNAT1P11488 350 aa16.39■□□□□ 0.21
CAPN3-207ENST00000397200 IDEP14735 1019 aa16.39■□□□□ 0.21
CAPN3-207ENST00000397200 PSMD2Q13200 908 aa16.39■□□□□ 0.21
CAPN3-207ENST00000397200 ITGA7Q13683 1181 aa16.39■□□□□ 0.21
CAPN3-207ENST00000397200 FAM102BQ5T8I3 360 aa16.39■□□□□ 0.21
CAPN3-207ENST00000397200 CENPPQ6IPU0 288 aa16.39■□□□□ 0.21
CAPN3-207ENST00000397200 NFRKBQ6P4R8 1299 aa16.39■□□□□ 0.21
CAPN3-207ENST00000397200 GUF1Q8N442 669 aaKnown RBP16.39■□□□□ 0.21
CAPN3-207ENST00000397200 RETREG2Q8NC44 543 aa16.39■□□□□ 0.21
CAPN3-207ENST00000397200 DRC1Q96MC2 740 aa16.39■□□□□ 0.21
CAPN3-207ENST00000397200 NAA15Q9BXJ9 866 aaKnown RBP16.39■□□□□ 0.21
CAPN3-207ENST00000397200 XPNPEP1Q9NQW7 623 aa16.39■□□□□ 0.21
CAPN3-207ENST00000397200 PDLIM7Q9NR12 457 aa16.39■□□□□ 0.21
CAPN3-207ENST00000397200 TRMT1Q9NXH9 659 aaKnown RBP16.39■□□□□ 0.21
CAPN3-207ENST00000397200 TAB2Q9NYJ8 693 aa16.39■□□□□ 0.21
CAPN3-207ENST00000397200 ODF2LQ9ULJ1 636 aa16.39■□□□□ 0.21
CAPN3-207ENST00000397200 EVPLQ92817 2033 aa16.39■□□□□ 0.21
CAPN3-207ENST00000397200 A0A0U1RQG5 324 aaPredicted RBP16.38■□□□□ 0.21
CAPN3-207ENST00000397200 A0A1W2PQC6 194 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms