RNA–Protein interactions for RNA: ENST00000397117.5

SEC13-209, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 5 BASIC

Gene SEC13, Length 1,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-209ENST00000397117 MICAL3Q7RTP6 2002 aa14.7□□□□□ -0.06
SEC13-209ENST00000397117 RBAK-RBAKDNI3L0D1 243 aa14.7□□□□□ -0.06
SEC13-209ENST00000397117 BACH1O14867 736 aa14.7□□□□□ -0.06
SEC13-209ENST00000397117 DKC1O60832 514 aaKnown RBP eCLIP14.7□□□□□ -0.06
SEC13-209ENST00000397117 CASP1P29466 404 aa14.7□□□□□ -0.06
SEC13-209ENST00000397117 PSMC5P62195 406 aa14.7□□□□□ -0.06
SEC13-209ENST00000397117 PTK7Q13308 1070 aa14.7□□□□□ -0.06
SEC13-209ENST00000397117 CELF3Q5SZQ8 465 aaKnown RBP14.7□□□□□ -0.06
SEC13-209ENST00000397117 NT5DC1Q5TFE4 455 aa14.7□□□□□ -0.06
SEC13-209ENST00000397117 DHX37Q8IY37 1157 aaKnown RBP14.7□□□□□ -0.06
SEC13-209ENST00000397117 ATP6V0A1Q93050 837 aa14.7□□□□□ -0.06
SEC13-209ENST00000397117 WNT8BQ93098 351 aa14.7□□□□□ -0.06
SEC13-209ENST00000397117 CCDC47Q96A33 483 aaKnown RBP14.7□□□□□ -0.06
SEC13-209ENST00000397117 GSDMAQ96QA5 445 aa14.7□□□□□ -0.06
SEC13-209ENST00000397117 C7orf25Q9BPX7 421 aa14.7□□□□□ -0.06
SEC13-209ENST00000397117 FUCA2Q9BTY2 467 aa14.7□□□□□ -0.06
SEC13-209ENST00000397117 UBE2ZQ9H832 354 aaPredicted RBP14.7□□□□□ -0.06
SEC13-209ENST00000397117 RMND1Q9NWS8 449 aa14.7□□□□□ -0.06
SEC13-209ENST00000397117 A0A087WWV3 80 aa14.69□□□□□ -0.06
SEC13-209ENST00000397117 GOLGA6L3A6NEY3 463 aa14.69□□□□□ -0.06
SEC13-209ENST00000397117 NOP56O00567 594 aaKnown RBP14.69□□□□□ -0.06
SEC13-209ENST00000397117 EFCAB14O75071 495 aa14.69□□□□□ -0.06
SEC13-209ENST00000397117 EYA4O95677 639 aa14.69□□□□□ -0.06
SEC13-209ENST00000397117 IKBKEQ14164 716 aa14.69□□□□□ -0.06
SEC13-209ENST00000397117 MBTPS1Q14703 1052 aa14.69□□□□□ -0.06
SEC13-209ENST00000397117 ABHD15Q6UXT9 468 aa14.69□□□□□ -0.06
SEC13-209ENST00000397117 C7orf31Q8N865 590 aa14.69□□□□□ -0.06
SEC13-209ENST00000397117 PIGOQ8TEQ8 1089 aa14.69□□□□□ -0.06
SEC13-209ENST00000397117 CCDC43Q96MW1 224 aaKnown RBP14.69□□□□□ -0.06
SEC13-209ENST00000397117 TRIM9Q9C026 710 aa14.69□□□□□ -0.06
SEC13-209ENST00000397117 BHMT2Q9H2M3 363 aa14.69□□□□□ -0.06
SEC13-209ENST00000397117 GABBR1Q9UBS5 961 aa14.69□□□□□ -0.06
SEC13-209ENST00000397117 F2P00734 622 aa14.68□□□□□ -0.06
SEC13-209ENST00000397117 RPN1P04843 607 aaKnown RBP14.68□□□□□ -0.06
SEC13-209ENST00000397117 KRT18P05783 430 aaKnown RBP14.68□□□□□ -0.06
SEC13-209ENST00000397117 HOXD8P13378 290 aaPredicted RBP14.68□□□□□ -0.06
SEC13-209ENST00000397117 SARSP49591 514 aaKnown RBP14.68□□□□□ -0.06
SEC13-209ENST00000397117 NLRP12P59046 1061 aa14.68□□□□□ -0.06
SEC13-209ENST00000397117 ASIC1P78348 528 aa14.68□□□□□ -0.06
SEC13-209ENST00000397117 ZNF200P98182 395 aaPredicted RBP14.68□□□□□ -0.06
SEC13-209ENST00000397117 MKRN4PQ13434 485 aaPredicted RBP14.68□□□□□ -0.06
SEC13-209ENST00000397117 LAMC2Q13753 1193 aa14.68□□□□□ -0.06
SEC13-209ENST00000397117 MFSD10Q14728 455 aa14.68□□□□□ -0.06
SEC13-209ENST00000397117 KIAA0753Q2KHM9 967 aa14.68□□□□□ -0.06
SEC13-209ENST00000397117 LEXMQ3ZCV2 418 aa14.68□□□□□ -0.06
SEC13-209ENST00000397117 ANO6Q4KMQ2 910 aa14.68□□□□□ -0.06
SEC13-209ENST00000397117 ZNF618Q5T7W0 954 aa14.68□□□□□ -0.06
SEC13-209ENST00000397117 ISM2Q6H9L7 571 aa14.68□□□□□ -0.06
SEC13-209ENST00000397117 SWSAP1Q6NVH7 229 aa14.68□□□□□ -0.06
SEC13-209ENST00000397117 GPBP1Q86WP2 473 aa14.68□□□□□ -0.06
SEC13-209ENST00000397117 SYT2Q8N9I0 419 aaPredicted RBP14.68□□□□□ -0.06
SEC13-209ENST00000397117 TRIML1Q8N9V2 468 aa14.68□□□□□ -0.06
SEC13-209ENST00000397117 PPTC7Q8NI37 304 aa14.68□□□□□ -0.06
SEC13-209ENST00000397117 SPATA20Q8TB22 786 aa14.68□□□□□ -0.06
SEC13-209ENST00000397117 SPATA33Q96N06 139 aa14.68□□□□□ -0.06
SEC13-209ENST00000397117 NAT10Q9H0A0 1025 aaKnown RBP14.68□□□□□ -0.06
SEC13-209ENST00000397117 MAN1B1Q9UKM7 699 aa14.68□□□□□ -0.06
SEC13-209ENST00000397117 MTUS1Q9ULD2 1270 aa14.68□□□□□ -0.06
SEC13-209ENST00000397117 FAM86C2PA6NEL3 165 aa14.67□□□□□ -0.06
SEC13-209ENST00000397117 MYMKA6NI61 221 aa14.67□□□□□ -0.06
SEC13-209ENST00000397117 ATG7O95352 703 aa14.67□□□□□ -0.06
SEC13-209ENST00000397117 LYPLA2O95372 231 aa14.67□□□□□ -0.06
SEC13-209ENST00000397117 CAVIN2O95810 425 aa14.67□□□□□ -0.06
SEC13-209ENST00000397117 SLC12A3P55017 1021 aa14.67□□□□□ -0.06
SEC13-209ENST00000397117 HIC1Q14526 733 aa14.67□□□□□ -0.06
SEC13-209ENST00000397117 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.67□□□□□ -0.064e-12■■■■■ 32
SEC13-209ENST00000397117 DYMQ7RTS9 669 aa14.67□□□□□ -0.06
SEC13-209ENST00000397117 GAS2L3Q86XJ1 694 aa14.67□□□□□ -0.06
SEC13-209ENST00000397117 FAM178BQ8IXR5 827 aa14.67□□□□□ -0.06
SEC13-209ENST00000397117 C4orf19Q8IY42 314 aa14.67□□□□□ -0.06
SEC13-209ENST00000397117 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.67□□□□□ -0.06
SEC13-209ENST00000397117 SEPT1Q8WYJ6 367 aa14.67□□□□□ -0.06
SEC13-209ENST00000397117 DDX12PQ92771 950 aa14.67□□□□□ -0.06
SEC13-209ENST00000397117 KATNAL1Q9BW62 490 aa14.67□□□□□ -0.06
SEC13-209ENST00000397117 ZNF302Q9NR11 478 aa14.67□□□□□ -0.06
SEC13-209ENST00000397117 WRAP73Q9P2S5 460 aaPredicted RBP14.67□□□□□ -0.06
SEC13-209ENST00000397117 MYO7AQ13402 2215 aa14.67□□□□□ -0.06
SEC13-209ENST00000397117 ARHGEF35A5YM69 484 aa14.66□□□□□ -0.06
SEC13-209ENST00000397117 PPFIA4O75335 1185 aa14.66□□□□□ -0.06
SEC13-209ENST00000397117 LGR5O75473 907 aa14.66□□□□□ -0.06
SEC13-209ENST00000397117 ZNF286BP0CG31 522 aa14.66□□□□□ -0.06
SEC13-209ENST00000397117 XRCC6P12956 609 aaKnown RBP eCLIP14.66□□□□□ -0.06
SEC13-209ENST00000397117 YWHABP31946 246 aaKnown RBP14.66□□□□□ -0.06
SEC13-209ENST00000397117 UGCGQ16739 394 aa14.66□□□□□ -0.06
SEC13-209ENST00000397117 FAM160B1Q5W0V3 765 aa14.66□□□□□ -0.06
SEC13-209ENST00000397117 FAM117BQ6P1L5 589 aa14.66□□□□□ -0.06
SEC13-209ENST00000397117 OTUD6AQ7L8S5 288 aa14.66□□□□□ -0.06
SEC13-209ENST00000397117 CCDC60Q8IWA6 550 aaPredicted RBP14.66□□□□□ -0.06
SEC13-209ENST00000397117 DNAJC25Q9H1X3 360 aa14.66□□□□□ -0.06
SEC13-209ENST00000397117 AZI2Q9H6S1 392 aa14.66□□□□□ -0.06
SEC13-209ENST00000397117 EXOC1Q9NV70 894 aa14.66□□□□□ -0.06
SEC13-209ENST00000397117 TELO2Q9Y4R8 837 aa14.66□□□□□ -0.06
SEC13-209ENST00000397117 INSL6Q9Y581 213 aa14.66□□□□□ -0.06
SEC13-209ENST00000397117 GSTTP1A0A1W2PQM5 241 aa14.66□□□□□ -0.06
SEC13-209ENST00000397117 ZBTB39O15060 712 aa14.66□□□□□ -0.06
SEC13-209ENST00000397117 IDEP14735 1019 aa14.66□□□□□ -0.06
SEC13-209ENST00000397117 TCF7P36402 384 aaPredicted RBP14.66□□□□□ -0.06
SEC13-209ENST00000397117 HTRA4P83105 476 aaPredicted RBP14.66□□□□□ -0.06
SEC13-209ENST00000397117 MORC3Q14149 939 aa14.66□□□□□ -0.06
SEC13-209ENST00000397117 CNNM4Q6P4Q7 775 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms