RNA–Protein interactions for RNA: ENST00000397007.8

NUP98-205, Transcript of nucleoporin 98, humanhuman

TSL 1 (best) BASIC

Gene NUP98, Length 3,698 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-205ENST00000397007 PLS3P13797 630 aa11.77□□□□□ -0.53
NUP98-205ENST00000397007 UBA7P41226 1012 aa11.77□□□□□ -0.53
NUP98-205ENST00000397007 MTERF2Q49AM1 385 aa11.77□□□□□ -0.53
NUP98-205ENST00000397007 UBXN11Q5T124 520 aa11.77□□□□□ -0.53
NUP98-205ENST00000397007 SLC39A4Q6P5W5 647 aa11.77□□□□□ -0.53
NUP98-205ENST00000397007 FAM228AQ86W67 206 aa11.77□□□□□ -0.53
NUP98-205ENST00000397007 IQUBQ8NA54 791 aa11.77□□□□□ -0.53
NUP98-205ENST00000397007 KIFAP3Q92845 792 aa11.77□□□□□ -0.53
NUP98-205ENST00000397007 SH2D3AQ9BRG2 576 aa11.77□□□□□ -0.53
NUP98-205ENST00000397007 FUCA2Q9BTY2 467 aa11.77□□□□□ -0.53
NUP98-205ENST00000397007 HAPLN2Q9GZV7 340 aa11.77□□□□□ -0.53
NUP98-205ENST00000397007 AGO3Q9H9G7 860 aaKnown RBP11.77□□□□□ -0.53
NUP98-205ENST00000397007 TRPV2Q9Y5S1 764 aa11.77□□□□□ -0.53
NUP98-205ENST00000397007 EFEMP2O95967 443 aa11.77□□□□□ -0.53
NUP98-205ENST00000397007 CYP2C9P11712 490 aa11.77□□□□□ -0.53
NUP98-205ENST00000397007 CLCN3P51790 818 aa11.77□□□□□ -0.53
NUP98-205ENST00000397007 CDC42EP1Q00587 391 aa11.77□□□□□ -0.53
NUP98-205ENST00000397007 NFIL3Q16649 462 aa11.77□□□□□ -0.53
NUP98-205ENST00000397007 LRRC8DQ7L1W4 858 aa11.77□□□□□ -0.53
NUP98-205ENST00000397007 DNAJB3Q8WWF6 145 aa11.77□□□□□ -0.53
NUP98-205ENST00000397007 PRPF31Q8WWY3 499 aaKnown RBP11.77□□□□□ -0.53
NUP98-205ENST00000397007 DDX12PQ92771 950 aa11.77□□□□□ -0.53
NUP98-205ENST00000397007 JPH2Q9BR39 696 aaPredicted RBP11.77□□□□□ -0.53
NUP98-205ENST00000397007 RNF19AQ9NV58 838 aa11.77□□□□□ -0.53
NUP98-205ENST00000397007 SAMM50Q9Y512 469 aa11.77□□□□□ -0.53
NUP98-205ENST00000397007 CNTNAP2Q9UHC6 1331 aa11.77□□□□□ -0.53
NUP98-205ENST00000397007 VWA8A3KMH1 1905 aa11.77□□□□□ -0.53
NUP98-205ENST00000397007 TTLL13PA6NNM8 815 aa11.76□□□□□ -0.53
NUP98-205ENST00000397007 CUL4BQ13620 913 aa11.76□□□□□ -0.53
NUP98-205ENST00000397007 MXD4Q14582 209 aaPredicted RBP11.76□□□□□ -0.53
NUP98-205ENST00000397007 ZCWPW2Q504Y3 356 aa11.76□□□□□ -0.53
NUP98-205ENST00000397007 USP38Q8NB14 1042 aa11.76□□□□□ -0.53
NUP98-205ENST00000397007 KIAA0895Q8NCT3 520 aa11.76□□□□□ -0.53
NUP98-205ENST00000397007 TCP11Q8WWU5 503 aa11.76□□□□□ -0.53
NUP98-205ENST00000397007 CALML4Q96GE6 196 aa11.76□□□□□ -0.53
NUP98-205ENST00000397007 PHLPP2Q6ZVD8 1323 aa11.76□□□□□ -0.53
NUP98-205ENST00000397007 MCM4P33991 863 aa11.76□□□□□ -0.53
NUP98-205ENST00000397007 RRAGBQ5VZM2 374 aa11.76□□□□□ -0.53
NUP98-205ENST00000397007 ZNF598Q86UK7 904 aaKnown RBP11.76□□□□□ -0.53
NUP98-205ENST00000397007 CCDC39Q9UFE4 941 aa11.76□□□□□ -0.53
NUP98-205ENST00000397007 TRPC6Q9Y210 931 aa11.76□□□□□ -0.53
NUP98-205ENST00000397007 COL4A3BPQ9Y5P4 624 aa11.76□□□□□ -0.53
NUP98-205ENST00000397007 GTPBP6O43824 516 aaPredicted RBP11.76□□□□□ -0.53
NUP98-205ENST00000397007 MGEA5O60502 916 aa11.76□□□□□ -0.53
NUP98-205ENST00000397007 NPTX2P47972 431 aa11.76□□□□□ -0.53
NUP98-205ENST00000397007 XKR9Q5GH70 373 aa11.76□□□□□ -0.53
NUP98-205ENST00000397007 XKR4Q5GH76 650 aa11.76□□□□□ -0.53
NUP98-205ENST00000397007 TSHZ1Q6ZSZ6 1077 aa11.76□□□□□ -0.53
NUP98-205ENST00000397007 UNC13DQ70J99 1090 aa11.76□□□□□ -0.53
NUP98-205ENST00000397007 LRRC71Q8N4P6 559 aa11.76□□□□□ -0.53
NUP98-205ENST00000397007 FSIP1Q8NA03 581 aa11.76□□□□□ -0.53
NUP98-205ENST00000397007 SEL1LQ9UBV2 794 aa11.76□□□□□ -0.53
NUP98-205ENST00000397007 CDY2AQ9Y6F7 541 aa11.76□□□□□ -0.53
NUP98-205ENST00000397007 UBE4BO95155 1302 aa11.75□□□□□ -0.53
NUP98-205ENST00000397007 PFKMP08237 780 aa11.75□□□□□ -0.53
NUP98-205ENST00000397007 CASP5P51878 434 aa11.75□□□□□ -0.53
NUP98-205ENST00000397007 ZNF720Q7Z2F6 126 aa11.75□□□□□ -0.53
NUP98-205ENST00000397007 SRGAP1Q7Z6B7 1085 aa11.75□□□□□ -0.53
NUP98-205ENST00000397007 ZNF507Q8TCN5 953 aa11.75□□□□□ -0.53
NUP98-205ENST00000397007 PATJQ8NI35 1801 aa11.75□□□□□ -0.53
NUP98-205ENST00000397007 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.75□□□□□ -0.53
NUP98-205ENST00000397007 CCDC85CA6NKD9 419 aa11.75□□□□□ -0.53
NUP98-205ENST00000397007 ATF7P17544 494 aaPredicted RBP11.75□□□□□ -0.53
NUP98-205ENST00000397007 TBC1D8BQ0IIM8 1120 aa11.75□□□□□ -0.53
NUP98-205ENST00000397007 FOXD4L6Q3SYB3 417 aaPredicted RBP11.75□□□□□ -0.53
NUP98-205ENST00000397007 FOXD4L3Q6VB84 417 aaPredicted RBP11.75□□□□□ -0.53
NUP98-205ENST00000397007 MRPL10Q7Z7H8 261 aaKnown RBP11.75□□□□□ -0.53
NUP98-205ENST00000397007 HVCN1Q96D96 273 aa11.75□□□□□ -0.53
NUP98-205ENST00000397007 MED15Q96RN5 788 aa11.75□□□□□ -0.53
NUP98-205ENST00000397007 POLR3FQ9H1D9 316 aaPredicted RBP11.75□□□□□ -0.53
NUP98-205ENST00000397007 KCTD10Q9H3F6 313 aa11.75□□□□□ -0.53
NUP98-205ENST00000397007 AGPAT5Q9NUQ2 364 aa11.75□□□□□ -0.53
NUP98-205ENST00000397007 SUCLA2Q9P2R7 463 aaPredicted RBP11.75□□□□□ -0.53
NUP98-205ENST00000397007 TSPAN1O60635 241 aa11.75□□□□□ -0.53
NUP98-205ENST00000397007 KSR1Q8IVT5 923 aa11.75□□□□□ -0.53
NUP98-205ENST00000397007 HERVK_113Q902F9 699 aa11.75□□□□□ -0.53
NUP98-205ENST00000397007 TMEM143Q96AN5 459 aa11.75□□□□□ -0.53
NUP98-205ENST00000397007 HTATIP2Q9BUP3 242 aa11.75□□□□□ -0.53
NUP98-205ENST00000397007 TCEAL9Q9UHQ7 104 aa11.75□□□□□ -0.53
NUP98-205ENST00000397007 NOC2LQ9Y3T9 749 aaKnown RBP11.75□□□□□ -0.53
NUP98-205ENST00000397007 SYKP43405 635 aa11.74□□□□□ -0.53
NUP98-205ENST00000397007 MAP4K3Q8IVH8 894 aa11.74□□□□□ -0.53
NUP98-205ENST00000397007 GLIS3Q8NEA6 775 aa11.74□□□□□ -0.53
NUP98-205ENST00000397007 ZNF689Q96CS4 500 aaPredicted RBP11.74□□□□□ -0.53
NUP98-205ENST00000397007 HIPK3Q9H422 1215 aa11.74□□□□□ -0.53
NUP98-205ENST00000397007 CLSTN2Q9H4D0 955 aa11.74□□□□□ -0.53
NUP98-205ENST00000397007 DCDC2CA8MYV0 355 aa11.74□□□□□ -0.53
NUP98-205ENST00000397007 EIF3DO15371 548 aaKnown RBP eCLIP11.74□□□□□ -0.53
NUP98-205ENST00000397007 TLR3O15455 904 aaKnown RBP11.74□□□□□ -0.53
NUP98-205ENST00000397007 PQBP1O60828 265 aaKnown RBP11.74□□□□□ -0.53
NUP98-205ENST00000397007 VTNP04004 478 aa11.74□□□□□ -0.53
NUP98-205ENST00000397007 STAT6P42226 847 aa11.74□□□□□ -0.53
NUP98-205ENST00000397007 MORC3Q14149 939 aa11.74□□□□□ -0.53
NUP98-205ENST00000397007 CSPP1Q1MSJ5 1256 aa11.74□□□□□ -0.53
NUP98-205ENST00000397007 ALKAL1Q6UXT8 129 aa11.74□□□□□ -0.53
NUP98-205ENST00000397007 GPBP1Q86WP2 473 aa11.74□□□□□ -0.53
NUP98-205ENST00000397007 GRAMD1CQ8IYS0 662 aa11.74□□□□□ -0.53
NUP98-205ENST00000397007 RETREG2Q8NC44 543 aa11.74□□□□□ -0.53
NUP98-205ENST00000397007 SP7Q8TDD2 431 aaPredicted RBP11.74□□□□□ -0.53
NUP98-205ENST00000397007 PRIMPOLQ96LW4 560 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms