RNA–Protein interactions for RNA: ENST00000396548.5

TRIM39-204, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIM39, Length 3,198 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-204ENST00000396548 NKX3-2P78367 333 aa13.98□□□□□ -0.17
TRIM39-204ENST00000396548 ZNF830Q96NB3 372 aaPredicted RBP13.98□□□□□ -0.17
TRIM39-204ENST00000396548 ACCSQ96QU6 501 aa13.98□□□□□ -0.17
TRIM39-204ENST00000396548 COL1A2P08123 1366 aa13.98□□□□□ -0.17
TRIM39-204ENST00000396548 N4BP3O15049 544 aa13.97□□□□□ -0.17
TRIM39-204ENST00000396548 C22orf31O95567 290 aa13.97□□□□□ -0.17
TRIM39-204ENST00000396548 ZNF286BP0CG31 522 aa13.97□□□□□ -0.17
TRIM39-204ENST00000396548 NAMPTP43490 491 aa13.97□□□□□ -0.17
TRIM39-204ENST00000396548 SP3Q02447 781 aa13.97□□□□□ -0.17
TRIM39-204ENST00000396548 PRKCZQ05513 592 aa13.97□□□□□ -0.17
TRIM39-204ENST00000396548 FILIP1LQ4L180 1135 aa13.97□□□□□ -0.17
TRIM39-204ENST00000396548 VWA3BQ502W6 1294 aa13.97□□□□□ -0.17
TRIM39-204ENST00000396548 FRMD5Q7Z6J6 570 aa13.97□□□□□ -0.17
TRIM39-204ENST00000396548 LRRC8AQ8IWT6 810 aa13.97□□□□□ -0.17
TRIM39-204ENST00000396548 SLC7A3Q8WY07 619 aa13.97□□□□□ -0.17
TRIM39-204ENST00000396548 TRIM44Q96DX7 344 aaPredicted RBP13.97□□□□□ -0.17
TRIM39-204ENST00000396548 GBP3Q9H0R5 595 aa13.97□□□□□ -0.17
TRIM39-204ENST00000396548 KMT5AQ9NQR1 393 aa13.97□□□□□ -0.17
TRIM39-204ENST00000396548 CGNQ9P2M7 1197 aaKnown RBP13.97□□□□□ -0.17
TRIM39-204ENST00000396548 GAS2O43903 313 aaKnown RBP13.97□□□□□ -0.17
TRIM39-204ENST00000396548 FLT3LGP49771 235 aa13.97□□□□□ -0.17
TRIM39-204ENST00000396548 MAN2A1Q16706 1144 aa13.97□□□□□ -0.17
TRIM39-204ENST00000396548 ZNF484Q5JVG2 852 aa13.97□□□□□ -0.17
TRIM39-204ENST00000396548 SLC39A4Q6P5W5 647 aa13.97□□□□□ -0.17
TRIM39-204ENST00000396548 ANKRD20A12PQ8NF67 263 aa13.97□□□□□ -0.17
TRIM39-204ENST00000396548 LENG1Q96BZ8 264 aaPredicted RBP13.97□□□□□ -0.17
TRIM39-204ENST00000396548 TMX1Q9H3N1 280 aa13.97□□□□□ -0.17
TRIM39-204ENST00000396548 CETN3O15182 167 aa13.97□□□□□ -0.17
TRIM39-204ENST00000396548 CLIC2O15247 247 aa13.97□□□□□ -0.17
TRIM39-204ENST00000396548 SCP2P22307 547 aa13.97□□□□□ -0.17
TRIM39-204ENST00000396548 CASP4P49662 377 aa13.97□□□□□ -0.17
TRIM39-204ENST00000396548 SMTNP53814 917 aa13.97□□□□□ -0.17
TRIM39-204ENST00000396548 DGKDQ16760 1214 aa13.97□□□□□ -0.17
TRIM39-204ENST00000396548 MARCH8Q5T0T0 291 aa13.97□□□□□ -0.17
TRIM39-204ENST00000396548 EXOC8Q8IYI6 725 aa13.97□□□□□ -0.17
TRIM39-204ENST00000396548 KAT2BQ92831 832 aa13.97□□□□□ -0.17
TRIM39-204ENST00000396548 ZKSCAN5Q9Y2L8 839 aa13.97□□□□□ -0.17
TRIM39-204ENST00000396548 TISP43B9A030 160 aa13.96□□□□□ -0.17
TRIM39-204ENST00000396548 PTMAP06454 111 aaKnown RBP13.96□□□□□ -0.17
TRIM39-204ENST00000396548 ADSSP30520 456 aa13.96□□□□□ -0.17
TRIM39-204ENST00000396548 DNM2P50570 870 aa13.96□□□□□ -0.17
TRIM39-204ENST00000396548 GSDMDP57764 484 aa13.96□□□□□ -0.17
TRIM39-204ENST00000396548 CAPSQ13938 189 aa13.96□□□□□ -0.17
TRIM39-204ENST00000396548 CDCA2Q69YH5 1023 aaPredicted RBP13.96□□□□□ -0.17
TRIM39-204ENST00000396548 TLK2Q86UE8 772 aa13.96□□□□□ -0.17
TRIM39-204ENST00000396548 GOLGA5Q8TBA6 731 aa13.96□□□□□ -0.17
TRIM39-204ENST00000396548 TRAPPC12Q8WVT3 735 aa13.96□□□□□ -0.17
TRIM39-204ENST00000396548 ERGIC2Q96RQ1 377 aa13.96□□□□□ -0.17
TRIM39-204ENST00000396548 NOC4LQ9BVI4 516 aaKnown RBP13.96□□□□□ -0.17
TRIM39-204ENST00000396548 DENND3A2RUS2 1198 aa13.96□□□□□ -0.17
TRIM39-204ENST00000396548 MTIF2P46199 727 aaKnown RBP13.96□□□□□ -0.17
TRIM39-204ENST00000396548 IRX5P78411 483 aaPredicted RBP13.96□□□□□ -0.17
TRIM39-204ENST00000396548 HTRA3P83110 453 aa13.96□□□□□ -0.17
TRIM39-204ENST00000396548 CCZ1BP86790 482 aa13.96□□□□□ -0.17
TRIM39-204ENST00000396548 CCZ1P86791 482 aaPredicted RBP13.96□□□□□ -0.17
TRIM39-204ENST00000396548 IER5Q5VY09 327 aa13.96□□□□□ -0.17
TRIM39-204ENST00000396548 MKNK1Q9BUB5 465 aa13.96□□□□□ -0.17
TRIM39-204ENST00000396548 TTYH3Q9C0H2 523 aa13.96□□□□□ -0.17
TRIM39-204ENST00000396548 CCDC113Q9H0I3 377 aa13.96□□□□□ -0.17
TRIM39-204ENST00000396548 NDST4Q9H3R1 872 aa13.96□□□□□ -0.17
TRIM39-204ENST00000396548 FAM184BQ9ULE4 1060 aa13.96□□□□□ -0.17
TRIM39-204ENST00000396548 H3BRB1 525 aa13.95□□□□□ -0.18
TRIM39-204ENST00000396548 HAS3O00219 553 aa13.95□□□□□ -0.18
TRIM39-204ENST00000396548 DYNC1LI2O43237 492 aaPredicted RBP13.95□□□□□ -0.18
TRIM39-204ENST00000396548 F2P00734 622 aa13.95□□□□□ -0.18
TRIM39-204ENST00000396548 PIGRP01833 764 aa13.95□□□□□ -0.18
TRIM39-204ENST00000396548 INSRRP14616 1297 aa13.95□□□□□ -0.18
TRIM39-204ENST00000396548 RPL13P26373 211 aaKnown RBP13.95□□□□□ -0.18
TRIM39-204ENST00000396548 UBXN1Q04323 297 aa13.95□□□□□ -0.18
TRIM39-204ENST00000396548 TBC1D8BQ0IIM8 1120 aa13.95□□□□□ -0.18
TRIM39-204ENST00000396548 LRMPQ12912 555 aa13.95□□□□□ -0.18
TRIM39-204ENST00000396548 TC2NQ8N9U0 490 aa13.95□□□□□ -0.18
TRIM39-204ENST00000396548 PRPF31Q8WWY3 499 aaKnown RBP13.95□□□□□ -0.18
TRIM39-204ENST00000396548 TUT1Q9H6E5 874 aaKnown RBP13.95□□□□□ -0.18
TRIM39-204ENST00000396548 KCNG1Q9UIX4 513 aa13.95□□□□□ -0.18
TRIM39-204ENST00000396548 SIK3Q9Y2K2 1263 aa13.95□□□□□ -0.18
TRIM39-204ENST00000396548 EVPLQ92817 2033 aa13.95□□□□□ -0.18
TRIM39-204ENST00000396548 CCDC169A6NNP5 214 aa13.95□□□□□ -0.18
TRIM39-204ENST00000396548 ANKRD63C9JTQ0 380 aa13.95□□□□□ -0.18
TRIM39-204ENST00000396548 TRPA1O75762 1119 aa13.95□□□□□ -0.18
TRIM39-204ENST00000396548 GYPCP04921 128 aa13.95□□□□□ -0.18
TRIM39-204ENST00000396548 EDN1P05305 212 aa13.95□□□□□ -0.18
TRIM39-204ENST00000396548 ABCD1P33897 745 aa13.95□□□□□ -0.18
TRIM39-204ENST00000396548 DPY19L2P1Q6NXN4 242 aa13.95□□□□□ -0.18
TRIM39-204ENST00000396548 TMEM139Q8IV31 216 aa13.95□□□□□ -0.18
TRIM39-204ENST00000396548 ZBTB10Q96DT7 871 aa13.95□□□□□ -0.18
TRIM39-204ENST00000396548 IFT74Q96LB3 600 aa13.95□□□□□ -0.18
TRIM39-204ENST00000396548 UPF3AQ9H1J1 476 aaKnown RBP13.95□□□□□ -0.18
TRIM39-204ENST00000396548 TMEM134Q9H6X4 195 aa13.95□□□□□ -0.18
TRIM39-204ENST00000396548 STYXL1Q9Y6J8 313 aa13.95□□□□□ -0.18
TRIM39-204ENST00000396548 RNF225M0QZC1 329 aaPredicted RBP13.95□□□□□ -0.18
TRIM39-204ENST00000396548 TRIM32Q13049 653 aa13.95□□□□□ -0.18
TRIM39-204ENST00000396548 ZSCAN30Q86W11 494 aa13.95□□□□□ -0.18
TRIM39-204ENST00000396548 TRPC6Q9Y210 931 aa13.95□□□□□ -0.18
TRIM39-204ENST00000396548 TCP11Q8WWU5 503 aa13.94□□□□□ -0.18
TRIM39-204ENST00000396548 H0YCG3 227 aa13.94□□□□□ -0.18
TRIM39-204ENST00000396548 MAPK13O15264 365 aa13.94□□□□□ -0.18
TRIM39-204ENST00000396548 ADCY3O60266 1144 aa13.94□□□□□ -0.18
TRIM39-204ENST00000396548 AKR1A1P14550 325 aa13.94□□□□□ -0.18
TRIM39-204ENST00000396548 RBL2Q08999 1139 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms