RNA–Protein interactions for RNA: ENST00000396521.3

EXOSC3-202, Transcript of exosome component 3, humanhuman

TSL 2 BASIC

Gene EXOSC3, Length 768 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-202ENST00000396521 PTPRZ1P23471 2315 aaPredicted RBP19.73■□□□□ 0.75
EXOSC3-202ENST00000396521 ZNF862O60290 1169 aa19.73■□□□□ 0.75
EXOSC3-202ENST00000396521 SFPQP23246 707 aaKnown RBP eCLIP19.73■□□□□ 0.75
EXOSC3-202ENST00000396521 BCAR1P56945 870 aa19.73■□□□□ 0.75
EXOSC3-202ENST00000396521 FOXK2Q01167 660 aa19.73■□□□□ 0.75
EXOSC3-202ENST00000396521 XKR3Q5GH77 459 aa19.73■□□□□ 0.75
EXOSC3-202ENST00000396521 RASEFQ8IZ41 740 aa19.73■□□□□ 0.75
EXOSC3-202ENST00000396521 LENG9Q96B70 501 aa19.73■□□□□ 0.75
EXOSC3-202ENST00000396521 SNX27Q96L92 541 aa19.73■□□□□ 0.75
EXOSC3-202ENST00000396521 JPH2Q9BR39 696 aaPredicted RBP19.73■□□□□ 0.75
EXOSC3-202ENST00000396521 RNF26Q9BY78 433 aaPredicted RBP19.73■□□□□ 0.75
EXOSC3-202ENST00000396521 NIFKQ9BYG3 293 aaKnown RBP19.73■□□□□ 0.75
EXOSC3-202ENST00000396521 POMKQ9H5K3 350 aa19.73■□□□□ 0.75
EXOSC3-202ENST00000396521 USP34Q70CQ2 3546 aa19.73■□□□□ 0.75
EXOSC3-202ENST00000396521 PBX3P40426 434 aa19.72■□□□□ 0.75
EXOSC3-202ENST00000396521 RAB27AP51159 221 aa19.72■□□□□ 0.75
EXOSC3-202ENST00000396521 TARBP2Q15633 366 aaKnown RBP19.72■□□□□ 0.75
EXOSC3-202ENST00000396521 ADCK5Q3MIX3 580 aa19.72■□□□□ 0.75
EXOSC3-202ENST00000396521 KIAA1841Q6NSI8 718 aa19.72■□□□□ 0.75
EXOSC3-202ENST00000396521 GLB1LQ6UWU2 654 aa19.72■□□□□ 0.75
EXOSC3-202ENST00000396521 DDX53Q86TM3 631 aaKnown RBP19.72■□□□□ 0.75
EXOSC3-202ENST00000396521 ZNF410Q86VK4 478 aa19.72■□□□□ 0.75
EXOSC3-202ENST00000396521 VPS52Q8N1B4 723 aa19.72■□□□□ 0.75
EXOSC3-202ENST00000396521 TDRD5Q8NAT2 981 aaKnown RBP19.72■□□□□ 0.75
EXOSC3-202ENST00000396521 HELQQ8TDG4 1101 aa19.72■□□□□ 0.75
EXOSC3-202ENST00000396521 SLC5A5Q92911 643 aa19.72■□□□□ 0.75
EXOSC3-202ENST00000396521 CCDC136Q96JN2 1154 aa19.72■□□□□ 0.75
EXOSC3-202ENST00000396521 APOL5Q9BWW9 433 aa19.72■□□□□ 0.75
EXOSC3-202ENST00000396521 TEKT3Q9BXF9 490 aa19.72■□□□□ 0.75
EXOSC3-202ENST00000396521 SH3GLB2Q9NR46 395 aa19.72■□□□□ 0.75
EXOSC3-202ENST00000396521 NID2Q14112 1375 aa19.71■□□□□ 0.75
EXOSC3-202ENST00000396521 C2CD4DB7Z1M9 353 aa19.71■□□□□ 0.75
EXOSC3-202ENST00000396521 MSH4O15457 936 aa19.71■□□□□ 0.75
EXOSC3-202ENST00000396521 ZNF623O75123 536 aa19.71■□□□□ 0.75
EXOSC3-202ENST00000396521 CTSAP10619 480 aa19.71■□□□□ 0.75
EXOSC3-202ENST00000396521 PHKA2P46019 1235 aa19.71■□□□□ 0.75
EXOSC3-202ENST00000396521 CLCN5P51795 746 aa19.71■□□□□ 0.75
EXOSC3-202ENST00000396521 LRCH2Q5VUJ6 765 aa19.71■□□□□ 0.75
EXOSC3-202ENST00000396521 EXOC8Q8IYI6 725 aa19.71■□□□□ 0.75
EXOSC3-202ENST00000396521 EVPLQ92817 2033 aa19.71■□□□□ 0.75
EXOSC3-202ENST00000396521 FAM177A1Q8N128 213 aaPredicted RBP19.7■□□□□ 0.74
EXOSC3-202ENST00000396521 ACSF2Q96CM8 615 aaPredicted RBP19.7■□□□□ 0.74
EXOSC3-202ENST00000396521 PGBD4Q96DM1 585 aa19.7■□□□□ 0.74
EXOSC3-202ENST00000396521 IGSF21Q96ID5 467 aa19.7■□□□□ 0.74
EXOSC3-202ENST00000396521 ZBP1Q9H171 429 aa19.7■□□□□ 0.74
EXOSC3-202ENST00000396521 DBR1Q9UK59 544 aaKnown RBP19.7■□□□□ 0.74
EXOSC3-202ENST00000396521 IGKV6-21A0A0C4DH24 114 aa19.69■□□□□ 0.74
EXOSC3-202ENST00000396521 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP19.69■□□□□ 0.74
EXOSC3-202ENST00000396521 ZC3H11AO75152 810 aaKnown RBP eCLIP19.69■□□□□ 0.74
EXOSC3-202ENST00000396521 BRD1O95696 1058 aa19.69■□□□□ 0.74
EXOSC3-202ENST00000396521 SP100P23497 879 aaPredicted RBP19.69■□□□□ 0.74
EXOSC3-202ENST00000396521 CA8P35219 290 aa19.69■□□□□ 0.74
EXOSC3-202ENST00000396521 Q4G0T1 1027 aa19.69■□□□□ 0.74
EXOSC3-202ENST00000396521 NOMO2Q5JPE7 1267 aa19.69■□□□□ 0.74
EXOSC3-202ENST00000396521 ASTLQ6HA08 431 aaPredicted RBP19.69■□□□□ 0.74
EXOSC3-202ENST00000396521 TWF2Q6IBS0 349 aaKnown RBP19.69■□□□□ 0.74
EXOSC3-202ENST00000396521 CYP26B1Q9NR63 512 aa19.69■□□□□ 0.74
EXOSC3-202ENST00000396521 MYH9P35579 1960 aaKnown RBP19.68■□□□□ 0.74
EXOSC3-202ENST00000396521 H0Y858 1186 aa19.68■□□□□ 0.74
EXOSC3-202ENST00000396521 PSMD10O75832 226 aa19.68■□□□□ 0.74
EXOSC3-202ENST00000396521 IFNAR1P17181 557 aa19.68■□□□□ 0.74
EXOSC3-202ENST00000396521 NBL1P41271 181 aa19.68■□□□□ 0.74
EXOSC3-202ENST00000396521 RNASELQ05823 741 aaKnown RBP19.68■□□□□ 0.74
EXOSC3-202ENST00000396521 RARS2Q5T160 578 aaKnown RBP19.68■□□□□ 0.74
EXOSC3-202ENST00000396521 BLOC1S2Q6QNY1 142 aa19.68■□□□□ 0.74
EXOSC3-202ENST00000396521 Q6ZUG5 572 aa19.68■□□□□ 0.74
EXOSC3-202ENST00000396521 OTOP3Q7RTS5 596 aa19.68■□□□□ 0.74
EXOSC3-202ENST00000396521 MIER3Q7Z3K6 550 aa19.68■□□□□ 0.74
EXOSC3-202ENST00000396521 CABP7Q86V35 215 aa19.68■□□□□ 0.74
EXOSC3-202ENST00000396521 KCNB2Q92953 911 aa19.68■□□□□ 0.74
EXOSC3-202ENST00000396521 BRF1Q92994 677 aa19.68■□□□□ 0.74
EXOSC3-202ENST00000396521 EMILIN2Q9BXX0 1053 aa19.68■□□□□ 0.74
EXOSC3-202ENST00000396521 UNC45AQ9H3U1 944 aa19.68■□□□□ 0.74
EXOSC3-202ENST00000396521 MFSD1Q9H3U5 465 aa19.68■□□□□ 0.74
EXOSC3-202ENST00000396521 FAM86C1Q9NVL1 165 aa19.68■□□□□ 0.74
EXOSC3-202ENST00000396521 KANSL3Q9P2N6 904 aa19.68■□□□□ 0.74
EXOSC3-202ENST00000396521 PPME1Q9Y570 386 aa19.68■□□□□ 0.74
EXOSC3-202ENST00000396521 RIF1Q5UIP0 2472 aaKnown RBP19.68■□□□□ 0.74
EXOSC3-202ENST00000396521 CFAP54Q96N23 3096 aa19.67■□□□□ 0.74
EXOSC3-202ENST00000396521 CYP3A7-CYP3A51PA0A087WV96 503 aa19.67■□□□□ 0.74
EXOSC3-202ENST00000396521 NT5C1B-RDH14C9J2C7 533 aa19.67■□□□□ 0.74
EXOSC3-202ENST00000396521 CHMP2AO43633 222 aa19.67■□□□□ 0.74
EXOSC3-202ENST00000396521 DKC1O60832 514 aaKnown RBP eCLIP19.67■□□□□ 0.74
EXOSC3-202ENST00000396521 CDC45O75419 566 aa19.67■□□□□ 0.74
EXOSC3-202ENST00000396521 PDGFBP01127 241 aaPredicted RBP19.67■□□□□ 0.74
EXOSC3-202ENST00000396521 GALTP07902 379 aa19.67■□□□□ 0.74
EXOSC3-202ENST00000396521 CYP3A7P24462 503 aa19.67■□□□□ 0.74
EXOSC3-202ENST00000396521 ELMSAN1Q6PJG2 1045 aa19.67■□□□□ 0.74
EXOSC3-202ENST00000396521 MOXD1Q6UVY6 613 aa19.67■□□□□ 0.74
EXOSC3-202ENST00000396521 SLC22A17Q8WUG5 538 aa19.67■□□□□ 0.74
EXOSC3-202ENST00000396521 AGXT2Q9BYV1 514 aa19.67■□□□□ 0.74
EXOSC3-202ENST00000396521 SFXN1Q9H9B4 322 aa19.67■□□□□ 0.74
EXOSC3-202ENST00000396521 FAM105AQ9NUU6 356 aa19.67■□□□□ 0.74
EXOSC3-202ENST00000396521 TBC1D13Q9NVG8 400 aa19.67■□□□□ 0.74
EXOSC3-202ENST00000396521 SUCLA2Q9P2R7 463 aaPredicted RBP19.67■□□□□ 0.74
EXOSC3-202ENST00000396521 LIMD1Q9UGP4 676 aa19.67■□□□□ 0.74
EXOSC3-202ENST00000396521 SEPT9Q9UHD8 586 aaPredicted RBP19.67■□□□□ 0.74
EXOSC3-202ENST00000396521 DPP7Q9UHL4 492 aa19.67■□□□□ 0.74
EXOSC3-202ENST00000396521 PIN4Q9Y237 131 aaKnown RBP19.67■□□□□ 0.74
EXOSC3-202ENST00000396521 MAFO75444 373 aaPredicted RBP19.66■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms