RNA–Protein interactions for RNA: ENST00000396342.6

DDR1-229, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 675 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-229ENST00000396342 DUSP6Q16828 381 aa18.35■□□□□ 0.53
DDR1-229ENST00000396342 CES5AQ6NT32 575 aa18.35■□□□□ 0.53
DDR1-229ENST00000396342 RNF135Q8IUD6 432 aa18.35■□□□□ 0.53
DDR1-229ENST00000396342 SLFN12Q8IYM2 578 aa18.35■□□□□ 0.53
DDR1-229ENST00000396342 URGCPQ8TCY9 931 aa18.35■□□□□ 0.53
DDR1-229ENST00000396342 MSLNLQ96KJ4 702 aa18.35■□□□□ 0.53
DDR1-229ENST00000396342 NLRP4Q96MN2 994 aa18.35■□□□□ 0.53
DDR1-229ENST00000396342 CASD1Q96PB1 797 aa18.35■□□□□ 0.53
DDR1-229ENST00000396342 PHF7Q9BWX1 381 aaPredicted RBP18.35■□□□□ 0.53
DDR1-229ENST00000396342 KCNH6Q9H252 994 aa18.35■□□□□ 0.53
DDR1-229ENST00000396342 USP15Q9Y4E8 981 aaPredicted RBP18.35■□□□□ 0.53
DDR1-229ENST00000396342 ADAMTS3O15072 1205 aa18.34■□□□□ 0.53
DDR1-229ENST00000396342 GAS2O43903 313 aaKnown RBP18.34■□□□□ 0.53
DDR1-229ENST00000396342 P4HBP07237 508 aaKnown RBP18.34■□□□□ 0.53
DDR1-229ENST00000396342 RFC5P40937 340 aa18.34■□□□□ 0.53
DDR1-229ENST00000396342 TECP42680 631 aa18.34■□□□□ 0.53
DDR1-229ENST00000396342 GIT2Q14161 759 aa18.34■□□□□ 0.53
DDR1-229ENST00000396342 SUGP1Q8IWZ8 645 aaKnown RBP18.34■□□□□ 0.53
DDR1-229ENST00000396342 LINC01465Q8N7H1 131 aa18.34■□□□□ 0.53
DDR1-229ENST00000396342 HELQQ8TDG4 1101 aa18.34■□□□□ 0.53
DDR1-229ENST00000396342 TCP11Q8WWU5 503 aa18.34■□□□□ 0.53
DDR1-229ENST00000396342 PSPC1Q8WXF1 523 aaKnown RBP18.34■□□□□ 0.53
DDR1-229ENST00000396342 CASP10Q92851 521 aa18.34■□□□□ 0.53
DDR1-229ENST00000396342 RPGRIP1Q96KN7 1286 aa18.34■□□□□ 0.53
DDR1-229ENST00000396342 CEP170P1Q96L14 293 aa18.34■□□□□ 0.53
DDR1-229ENST00000396342 FAM193BQ96PV7 902 aaPredicted RBP18.34■□□□□ 0.53
DDR1-229ENST00000396342 LARP6Q9BRS8 491 aaKnown RBP18.34■□□□□ 0.53
DDR1-229ENST00000396342 CWH43Q9H720 699 aa18.34■□□□□ 0.53
DDR1-229ENST00000396342 NR2E1Q9Y466 385 aa18.34■□□□□ 0.53
DDR1-229ENST00000396342 A0A087WZ62 844 aa18.33■□□□□ 0.52
DDR1-229ENST00000396342 TBX3O15119 743 aa18.33■□□□□ 0.52
DDR1-229ENST00000396342 MAFO75444 373 aaPredicted RBP18.33■□□□□ 0.52
DDR1-229ENST00000396342 ATF7P17544 494 aaPredicted RBP18.33■□□□□ 0.52
DDR1-229ENST00000396342 ERVFC1P60507 584 aa18.33■□□□□ 0.52
DDR1-229ENST00000396342 TARBP2Q15633 366 aaKnown RBP18.33■□□□□ 0.52
DDR1-229ENST00000396342 HERC4Q5GLZ8 1057 aaPredicted RBP18.33■□□□□ 0.52
DDR1-229ENST00000396342 PPP4R3AQ6IN85 833 aa18.33■□□□□ 0.52
DDR1-229ENST00000396342 LLGL2Q6P1M3 1020 aa18.33■□□□□ 0.52
DDR1-229ENST00000396342 GJA10Q969M2 543 aa18.33■□□□□ 0.52
DDR1-229ENST00000396342 FDXACB1Q9BRP7 624 aaPredicted RBP18.33■□□□□ 0.52
DDR1-229ENST00000396342 CYP26B1Q9NR63 512 aa18.33■□□□□ 0.52
DDR1-229ENST00000396342 CLEC1BQ9P126 229 aa18.33■□□□□ 0.52
DDR1-229ENST00000396342 MUTYHQ9UIF7 546 aa18.33■□□□□ 0.52
DDR1-229ENST00000396342 KCNJ14Q9UNX9 436 aa18.33■□□□□ 0.52
DDR1-229ENST00000396342 BRWD1Q9NSI6 2320 aa18.32■□□□□ 0.52
DDR1-229ENST00000396342 STK36Q9NRP7 1315 aa18.32■□□□□ 0.52
DDR1-229ENST00000396342 ASAP2O43150 1006 aa18.32■□□□□ 0.52
DDR1-229ENST00000396342 ZC3H11AO75152 810 aaKnown RBP eCLIP18.32■□□□□ 0.52
DDR1-229ENST00000396342 FGFR4P22455 802 aa18.32■□□□□ 0.52
DDR1-229ENST00000396342 ANAPC15P60006 121 aa18.32■□□□□ 0.52
DDR1-229ENST00000396342 PPP2R5CQ13362 524 aa18.32■□□□□ 0.52
DDR1-229ENST00000396342 ELMSAN1Q6PJG2 1045 aa18.32■□□□□ 0.52
DDR1-229ENST00000396342 PIK3AP1Q6ZUJ8 805 aa18.32■□□□□ 0.52
DDR1-229ENST00000396342 ETNPPLQ8TBG4 499 aa18.32■□□□□ 0.52
DDR1-229ENST00000396342 EDAQ92838 391 aa18.32■□□□□ 0.52
DDR1-229ENST00000396342 C11orf16Q9NQ32 467 aa18.32■□□□□ 0.52
DDR1-229ENST00000396342 INPP5FQ9Y2H2 1132 aa18.32■□□□□ 0.52
DDR1-229ENST00000396342 COL4A3BPQ9Y5P4 624 aa18.32■□□□□ 0.52
DDR1-229ENST00000396342 FSCN2O14926 492 aa18.31■□□□□ 0.52
DDR1-229ENST00000396342 NR1I2O75469 434 aa18.31■□□□□ 0.52
DDR1-229ENST00000396342 ERLIN2O94905 339 aa18.31■□□□□ 0.52
DDR1-229ENST00000396342 CXCL14O95715 111 aa18.31■□□□□ 0.52
DDR1-229ENST00000396342 KRT2P35908 639 aa18.31■□□□□ 0.52
DDR1-229ENST00000396342 PHKA2P46019 1235 aa18.31■□□□□ 0.52
DDR1-229ENST00000396342 TFDP1Q14186 410 aa18.31■□□□□ 0.52
DDR1-229ENST00000396342 CBX2Q14781 532 aaPredicted RBP18.31■□□□□ 0.52
DDR1-229ENST00000396342 NCAPH2Q6IBW4 605 aa18.31■□□□□ 0.52
DDR1-229ENST00000396342 HACE1Q8IYU2 909 aa18.31■□□□□ 0.52
DDR1-229ENST00000396342 MBOAT7Q96N66 472 aa18.31■□□□□ 0.52
DDR1-229ENST00000396342 NECTIN4Q96NY8 510 aa18.31■□□□□ 0.52
DDR1-229ENST00000396342 PRRX2Q99811 253 aa18.31■□□□□ 0.52
DDR1-229ENST00000396342 PHF20Q9BVI0 1012 aa18.31■□□□□ 0.52
DDR1-229ENST00000396342 ZSWIM4Q9H7M6 989 aa18.31■□□□□ 0.52
DDR1-229ENST00000396342 KANSL3Q9P2N6 904 aa18.31■□□□□ 0.52
DDR1-229ENST00000396342 ORC3Q9UBD5 711 aaPredicted RBP18.31■□□□□ 0.52
DDR1-229ENST00000396342 PCDHGC5Q9Y5F6 944 aa18.31■□□□□ 0.52
DDR1-229ENST00000396342 PFKFB2O60825 505 aa18.3■□□□□ 0.52
DDR1-229ENST00000396342 SRGAP2CP0DJJ0 459 aa18.3■□□□□ 0.52
DDR1-229ENST00000396342 BCAR1P56945 870 aa18.3■□□□□ 0.52
DDR1-229ENST00000396342 ITIH3Q06033 890 aa18.3■□□□□ 0.52
DDR1-229ENST00000396342 EPHA7Q15375 998 aa18.3■□□□□ 0.52
DDR1-229ENST00000396342 XKR9Q5GH70 373 aa18.3■□□□□ 0.52
DDR1-229ENST00000396342 NOMO2Q5JPE7 1267 aa18.3■□□□□ 0.52
DDR1-229ENST00000396342 ANKRD54Q6NXT1 300 aa18.3■□□□□ 0.52
DDR1-229ENST00000396342 SRGAP1Q7Z6B7 1085 aa18.3■□□□□ 0.52
DDR1-229ENST00000396342 CNNM3Q8NE01 707 aa18.3■□□□□ 0.52
DDR1-229ENST00000396342 RIPOR3Q96MK2 946 aa18.3■□□□□ 0.52
DDR1-229ENST00000396342 TRAIPQ9BWF2 469 aa18.3■□□□□ 0.52
DDR1-229ENST00000396342 UBN1Q9NPG3 1134 aa18.3■□□□□ 0.52
DDR1-229ENST00000396342 DZANK1Q9NVP4 752 aa18.3■□□□□ 0.52
DDR1-229ENST00000396342 NLRC5Q86WI3 1866 aa18.29■□□□□ 0.52
DDR1-229ENST00000396342 IGKV6-21A0A0C4DH24 114 aa18.29■□□□□ 0.52
DDR1-229ENST00000396342 CSDE1O75534 798 aaKnown RBP18.29■□□□□ 0.52
DDR1-229ENST00000396342 YWHABP31946 246 aaKnown RBP18.29■□□□□ 0.52
DDR1-229ENST00000396342 SCRN1Q12765 414 aa18.29■□□□□ 0.52
DDR1-229ENST00000396342 MXD4Q14582 209 aaPredicted RBP18.29■□□□□ 0.52
DDR1-229ENST00000396342 PCBP1Q15365 356 aaKnown RBP eCLIP18.29■□□□□ 0.52
DDR1-229ENST00000396342 SAFBQ15424 915 aaKnown RBP eCLIP18.29■□□□□ 0.52
DDR1-229ENST00000396342 CLLU1OSQ5K130 101 aa18.29■□□□□ 0.52
DDR1-229ENST00000396342 PLA2G4FQ68DD2 849 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms