RNA–Protein interactions for RNA: ENST00000395756.5

SREBF1-204, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 3,026 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-204ENST00000395756 BEND6Q5SZJ8 279 aaPredicted RBP19.49■□□□□ 0.71
SREBF1-204ENST00000395756 TREML2Q5T2D2 321 aa19.49■□□□□ 0.71
SREBF1-204ENST00000395756 MOB2Q70IA6 237 aa19.49■□□□□ 0.71
SREBF1-204ENST00000395756 NEK9Q8TD19 979 aa19.49■□□□□ 0.71
SREBF1-204ENST00000395756 NSUN6Q8TEA1 469 aaKnown RBP19.49■□□□□ 0.71
SREBF1-204ENST00000395756 LUC7LQ9NQ29 371 aaKnown RBP19.49■□□□□ 0.71
SREBF1-204ENST00000395756 KCND2Q9NZV8 630 aa19.49■□□□□ 0.71
SREBF1-204ENST00000395756 PCDHA10Q9Y5I2 948 aa19.49■□□□□ 0.71
SREBF1-204ENST00000395756 PSME4Q14997 1843 aa19.48■□□□□ 0.71
SREBF1-204ENST00000395756 EMSYQ7Z589 1322 aa19.48■□□□□ 0.71
SREBF1-204ENST00000395756 MYH10P35580 1976 aa19.48■□□□□ 0.71
SREBF1-204ENST00000395756 MYL7Q01449 175 aa19.48■□□□□ 0.71
SREBF1-204ENST00000395756 SMC1AQ14683 1233 aaKnown RBP19.48■□□□□ 0.71
SREBF1-204ENST00000395756 TERF2Q15554 542 aa19.48■□□□□ 0.71
SREBF1-204ENST00000395756 ANKRD35Q8N283 1001 aa19.48■□□□□ 0.71
SREBF1-204ENST00000395756 CALCOCO1Q9P1Z2 691 aa19.48■□□□□ 0.71
SREBF1-204ENST00000395756 NAGPAQ9UK23 515 aa19.48■□□□□ 0.71
SREBF1-204ENST00000395756 ZNF862O60290 1169 aa19.48■□□□□ 0.71
SREBF1-204ENST00000395756 CKAP4Q07065 602 aaKnown RBP19.48■□□□□ 0.71
SREBF1-204ENST00000395756 KCTD17Q8N5Z5 321 aa19.48■□□□□ 0.71
SREBF1-204ENST00000395756 MSANTD4Q8NCY6 345 aa19.48■□□□□ 0.71
SREBF1-204ENST00000395756 MOV10L1Q9BXT6 1211 aaKnown RBP19.48■□□□□ 0.71
SREBF1-204ENST00000395756 TEX13BQ9BXU2 312 aa19.48■□□□□ 0.71
SREBF1-204ENST00000395756 INTS2Q9H0H0 1204 aaKnown RBP19.48■□□□□ 0.71
SREBF1-204ENST00000395756 CYP39A1Q9NYL5 469 aa19.48■□□□□ 0.71
SREBF1-204ENST00000395756 SEPT9Q9UHD8 586 aaPredicted RBP19.48■□□□□ 0.71
SREBF1-204ENST00000395756 HYOU1Q9Y4L1 999 aa19.48■□□□□ 0.71
SREBF1-204ENST00000395756 PHACTR2O75167 634 aa19.47■□□□□ 0.71
SREBF1-204ENST00000395756 STAT1P42224 750 aa19.47■□□□□ 0.71
SREBF1-204ENST00000395756 PPP3CAQ08209 521 aa19.47■□□□□ 0.71
SREBF1-204ENST00000395756 CATSPERGQ6ZRH7 1159 aa19.47■□□□□ 0.71
SREBF1-204ENST00000395756 CYFIP1Q7L576 1253 aa19.47■□□□□ 0.71
SREBF1-204ENST00000395756 ACCSQ96QU6 501 aa19.47■□□□□ 0.71
SREBF1-204ENST00000395756 SGIP1Q9BQI5 828 aa19.47■□□□□ 0.71
SREBF1-204ENST00000395756 PAGR1Q9BTK6 254 aa19.47■□□□□ 0.71
SREBF1-204ENST00000395756 LRRC1Q9BTT6 524 aa19.47■□□□□ 0.71
SREBF1-204ENST00000395756 UBE2TQ9NPD8 197 aaPredicted RBP19.47■□□□□ 0.71
SREBF1-204ENST00000395756 HSPBP1Q9NZL4 362 aa19.47■□□□□ 0.71
SREBF1-204ENST00000395756 ZNF112Q9UJU3 913 aa19.47■□□□□ 0.71
SREBF1-204ENST00000395756 TULP2O00295 520 aa19.47■□□□□ 0.71
SREBF1-204ENST00000395756 PJA2O43164 708 aa19.47■□□□□ 0.71
SREBF1-204ENST00000395756 ERLIN1O75477 346 aa19.47■□□□□ 0.71
SREBF1-204ENST00000395756 MUTP22033 750 aa19.47■□□□□ 0.71
SREBF1-204ENST00000395756 NAB2Q15742 525 aa19.47■□□□□ 0.71
SREBF1-204ENST00000395756 PHLDB3Q6NSJ2 640 aa19.47■□□□□ 0.71
SREBF1-204ENST00000395756 NIPA1Q7RTP0 329 aa19.47■□□□□ 0.71
SREBF1-204ENST00000395756 DMAC2Q9NW81 257 aa19.47■□□□□ 0.71
SREBF1-204ENST00000395756 CHORDC1Q9UHD1 332 aaPredicted RBP19.47■□□□□ 0.71
SREBF1-204ENST00000395756 ANKRD63C9JTQ0 380 aa19.46■□□□□ 0.71
SREBF1-204ENST00000395756 CLGNO14967 610 aa19.46■□□□□ 0.71
SREBF1-204ENST00000395756 KRT76Q01546 638 aa19.46■□□□□ 0.71
SREBF1-204ENST00000395756 VGLL4Q14135 290 aa19.46■□□□□ 0.71
SREBF1-204ENST00000395756 CBWD2Q8IUF1 395 aa19.46■□□□□ 0.71
SREBF1-204ENST00000395756 REPS2Q8NFH8 660 aa19.46■□□□□ 0.71
SREBF1-204ENST00000395756 PDE11AQ9HCR9 933 aa19.46■□□□□ 0.71
SREBF1-204ENST00000395756 ACP6Q9NPH0 428 aa19.46■□□□□ 0.71
SREBF1-204ENST00000395756 DENND3A2RUS2 1198 aa19.46■□□□□ 0.71
SREBF1-204ENST00000395756 SPDYE16A6NNV3 312 aaPredicted RBP19.46■□□□□ 0.71
SREBF1-204ENST00000395756 RBAK-RBAKDNI3L0D1 243 aa19.46■□□□□ 0.71
SREBF1-204ENST00000395756 PPP1R37O75864 691 aa19.46■□□□□ 0.71
SREBF1-204ENST00000395756 MTERF2Q49AM1 385 aa19.46■□□□□ 0.71
SREBF1-204ENST00000395756 GADL1Q6ZQY3 521 aa19.46■□□□□ 0.71
SREBF1-204ENST00000395756 C4orf19Q8IY42 314 aa19.46■□□□□ 0.71
SREBF1-204ENST00000395756 PROCA1Q8NCQ7 364 aaPredicted RBP19.46■□□□□ 0.71
SREBF1-204ENST00000395756 SPATA4Q8NEY3 305 aa19.46■□□□□ 0.71
SREBF1-204ENST00000395756 BSNDQ8WZ55 320 aa19.46■□□□□ 0.71
SREBF1-204ENST00000395756 ACAD9Q9H845 621 aa19.46■□□□□ 0.71
SREBF1-204ENST00000395756 POTEB2H3BUK9 544 aa19.46■□□□□ 0.71
SREBF1-204ENST00000395756 USP2O75604 605 aaPredicted RBP19.46■□□□□ 0.71
SREBF1-204ENST00000395756 OAS2P29728 719 aaKnown RBP19.46■□□□□ 0.71
SREBF1-204ENST00000395756 NPTX2P47972 431 aa19.46■□□□□ 0.71
SREBF1-204ENST00000395756 VAMP7P51809 220 aa19.46■□□□□ 0.71
SREBF1-204ENST00000395756 JAK3P52333 1124 aa19.46■□□□□ 0.71
SREBF1-204ENST00000395756 SP2Q02086 613 aa19.46■□□□□ 0.71
SREBF1-204ENST00000395756 CCDC60Q8IWA6 550 aaPredicted RBP19.46■□□□□ 0.71
SREBF1-204ENST00000395756 KAT5Q92993 513 aa19.46■□□□□ 0.71
SREBF1-204ENST00000395756 R3HDMLQ9H3Y0 253 aa19.46■□□□□ 0.71
SREBF1-204ENST00000395756 FAM53CQ9NYF3 392 aa19.46■□□□□ 0.71
SREBF1-204ENST00000395756 FEZ2Q9UHY8 353 aaPredicted RBP19.46■□□□□ 0.71
SREBF1-204ENST00000395756 DBR1Q9UK59 544 aaKnown RBP19.46■□□□□ 0.71
SREBF1-204ENST00000395756 RAB21Q9UL25 225 aa19.46■□□□□ 0.71
SREBF1-204ENST00000395756 FOXN3O00409 490 aaPredicted RBP19.45■□□□□ 0.7
SREBF1-204ENST00000395756 DDX3XO00571 662 aaKnown RBP eCLIP19.45■□□□□ 0.7
SREBF1-204ENST00000395756 N4BP1O75113 896 aaKnown RBP19.45■□□□□ 0.7
SREBF1-204ENST00000395756 PAFAH1B1P43034 410 aa19.45■□□□□ 0.7
SREBF1-204ENST00000395756 MAP2K1Q02750 393 aaPredicted RBP19.45■□□□□ 0.7
SREBF1-204ENST00000395756 TTLL12Q14166 644 aaPredicted RBP19.45■□□□□ 0.7
SREBF1-204ENST00000395756 TMEM206Q9H813 350 aa19.45■□□□□ 0.7
SREBF1-204ENST00000395756 JPH1Q9HDC5 661 aaPredicted RBP19.45■□□□□ 0.7
SREBF1-204ENST00000395756 KMT5AQ9NQR1 393 aa19.45■□□□□ 0.7
SREBF1-204ENST00000395756 F8VZ95 297 aa19.45■□□□□ 0.7
SREBF1-204ENST00000395756 MYBL2P10244 700 aa19.45■□□□□ 0.7
SREBF1-204ENST00000395756 SUPT20HL1Q3ZLR7 823 aa19.45■□□□□ 0.7
SREBF1-204ENST00000395756 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.45■□□□□ 0.7
SREBF1-204ENST00000395756 XXYLT1Q8NBI6 393 aa19.45■□□□□ 0.7
SREBF1-204ENST00000395756 PLEKHO2Q8TD55 490 aa19.45■□□□□ 0.7
SREBF1-204ENST00000395756 HOXC10Q9NYD6 342 aa19.45■□□□□ 0.7
SREBF1-204ENST00000395756 DMGDHQ9UI17 866 aaKnown RBP19.45■□□□□ 0.7
SREBF1-204ENST00000395756 AFG3L2Q9Y4W6 797 aa19.45■□□□□ 0.7
SREBF1-204ENST00000395756 GRID2IPA4D2P6 1211 aa19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms