RNA–Protein interactions for RNA: ENST00000395722.7

PTPN20-206, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 1,995 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-206ENST00000395722 LMBR1Q8WVP7 490 aa16.66■□□□□ 0.26
PTPN20-206ENST00000395722 ADGRA3Q8IWK6 1321 aa16.66■□□□□ 0.26
PTPN20-206ENST00000395722 SIP14410 1827 aa16.66■□□□□ 0.26
PTPN20-206ENST00000395722 SLC16A4O15374 487 aa16.66■□□□□ 0.26
PTPN20-206ENST00000395722 IGBP1P78318 339 aa16.66■□□□□ 0.26
PTPN20-206ENST00000395722 EFCAB12Q6NXP0 572 aa16.66■□□□□ 0.26
PTPN20-206ENST00000395722 ZC3H3Q8IXZ2 948 aaKnown RBP16.66■□□□□ 0.26
PTPN20-206ENST00000395722 LRRC71Q8N4P6 559 aa16.66■□□□□ 0.26
PTPN20-206ENST00000395722 PCSK9Q8NBP7 692 aaKnown RBP16.66■□□□□ 0.26
PTPN20-206ENST00000395722 RETREG2Q8NC44 543 aa16.66■□□□□ 0.26
PTPN20-206ENST00000395722 PRPF31Q8WWY3 499 aaKnown RBP16.66■□□□□ 0.26
PTPN20-206ENST00000395722 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.66■□□□□ 0.26
PTPN20-206ENST00000395722 KMT5AQ9NQR1 393 aa16.66■□□□□ 0.26
PTPN20-206ENST00000395722 SETD4Q9NVD3 440 aa16.66■□□□□ 0.26
PTPN20-206ENST00000395722 TRAF3IP3Q9Y228 551 aa16.66■□□□□ 0.26
PTPN20-206ENST00000395722 KAT6AQ92794 2004 aa16.65■□□□□ 0.26
PTPN20-206ENST00000395722 H0YCG3 227 aa16.65■□□□□ 0.26
PTPN20-206ENST00000395722 PDXKO00764 312 aa16.65■□□□□ 0.26
PTPN20-206ENST00000395722 KCNA1Q09470 495 aa16.65■□□□□ 0.26
PTPN20-206ENST00000395722 MXD4Q14582 209 aaPredicted RBP16.65■□□□□ 0.26
PTPN20-206ENST00000395722 KCNA10Q16322 511 aa16.65■□□□□ 0.26
PTPN20-206ENST00000395722 CXCL17Q6UXB2 119 aa16.65■□□□□ 0.26
PTPN20-206ENST00000395722 PPP4R3CPQ6ZMV5 832 aa16.65■□□□□ 0.26
PTPN20-206ENST00000395722 CTU1Q7Z7A3 348 aaKnown RBP16.65■□□□□ 0.26
PTPN20-206ENST00000395722 NELFCDQ8IXH7 590 aa16.65■□□□□ 0.26
PTPN20-206ENST00000395722 PSPC1Q8WXF1 523 aaKnown RBP16.65■□□□□ 0.26
PTPN20-206ENST00000395722 ZBTB10Q96DT7 871 aa16.65■□□□□ 0.26
PTPN20-206ENST00000395722 SUGCTQ9HAC7 445 aa16.65■□□□□ 0.26
PTPN20-206ENST00000395722 SAMSN1Q9NSI8 373 aaKnown RBP16.65■□□□□ 0.26
PTPN20-206ENST00000395722 SUCLA2Q9P2R7 463 aaPredicted RBP16.65■□□□□ 0.26
PTPN20-206ENST00000395722 CCDC169A6NNP5 214 aa16.64■□□□□ 0.25
PTPN20-206ENST00000395722 AP5Z1O43299 807 aa16.64■□□□□ 0.25
PTPN20-206ENST00000395722 ASGR1P07306 291 aa16.64■□□□□ 0.25
PTPN20-206ENST00000395722 ABCD1P33897 745 aa16.64■□□□□ 0.25
PTPN20-206ENST00000395722 TPM4P67936 248 aa16.64■□□□□ 0.25
PTPN20-206ENST00000395722 LAMTOR4Q0VGL1 99 aa16.64■□□□□ 0.25
PTPN20-206ENST00000395722 CAPSQ13938 189 aa16.64■□□□□ 0.25
PTPN20-206ENST00000395722 HIC1Q14526 733 aa16.64■□□□□ 0.25
PTPN20-206ENST00000395722 EDRF1Q3B7T1 1238 aa16.64■□□□□ 0.25
PTPN20-206ENST00000395722 SARM1Q6SZW1 724 aa16.64■□□□□ 0.25
PTPN20-206ENST00000395722 RNF180Q86T96 592 aa16.64■□□□□ 0.25
PTPN20-206ENST00000395722 NOC3LQ8WTT2 800 aaKnown RBP16.64■□□□□ 0.25
PTPN20-206ENST00000395722 KIFC3Q9BVG8 833 aa16.64■□□□□ 0.25
PTPN20-206ENST00000395722 PAK6Q9NQU5 681 aaPredicted RBP16.64■□□□□ 0.25
PTPN20-206ENST00000395722 TYW1Q9NV66 732 aaKnown RBP16.64■□□□□ 0.25
PTPN20-206ENST00000395722 HTTP42858 3142 aa16.64■□□□□ 0.25
PTPN20-206ENST00000395722 EVPLQ92817 2033 aa16.64■□□□□ 0.25
PTPN20-206ENST00000395722 ASAP2O43150 1006 aa16.64■□□□□ 0.25
PTPN20-206ENST00000395722 TGFB1I1O43294 461 aa16.64■□□□□ 0.25
PTPN20-206ENST00000395722 DNM2P50570 870 aa16.64■□□□□ 0.25
PTPN20-206ENST00000395722 CLCN3P51790 818 aa16.64■□□□□ 0.25
PTPN20-206ENST00000395722 NFIL3Q16649 462 aa16.64■□□□□ 0.25
PTPN20-206ENST00000395722 CDCA2Q69YH5 1023 aaPredicted RBP16.64■□□□□ 0.25
PTPN20-206ENST00000395722 LRRC55Q6ZSA7 311 aa16.64■□□□□ 0.25
PTPN20-206ENST00000395722 IRF2BP1Q8IU81 584 aa16.64■□□□□ 0.25
PTPN20-206ENST00000395722 MAP4K3Q8IVH8 894 aa16.64■□□□□ 0.25
PTPN20-206ENST00000395722 ACCSQ96QU6 501 aa16.64■□□□□ 0.25
PTPN20-206ENST00000395722 TSG101Q99816 390 aa16.64■□□□□ 0.25
PTPN20-206ENST00000395722 TSEN34Q9BSV6 310 aaKnown RBP16.64■□□□□ 0.25
PTPN20-206ENST00000395722 UNC93B1Q9H1C4 597 aa16.64■□□□□ 0.25
PTPN20-206ENST00000395722 THAP9Q9H5L6 903 aa16.64■□□□□ 0.25
PTPN20-206ENST00000395722 CABYRO75952 493 aa16.63■□□□□ 0.25
PTPN20-206ENST00000395722 POU5F1BQ06416 359 aa16.63■□□□□ 0.25
PTPN20-206ENST00000395722 SLC9C1Q4G0N8 1177 aa16.63■□□□□ 0.25
PTPN20-206ENST00000395722 TAS1R3Q7RTX0 852 aa16.63■□□□□ 0.25
PTPN20-206ENST00000395722 SESTD1Q86VW0 696 aa16.63■□□□□ 0.25
PTPN20-206ENST00000395722 KSR1Q8IVT5 923 aa16.63■□□□□ 0.25
PTPN20-206ENST00000395722 CSGALNACT2Q8N6G5 542 aa16.63■□□□□ 0.25
PTPN20-206ENST00000395722 METTL13Q8N6R0 699 aa16.63■□□□□ 0.25
PTPN20-206ENST00000395722 TMEM174Q8WUU8 243 aa16.63■□□□□ 0.25
PTPN20-206ENST00000395722 TMEM206Q9H813 350 aa16.63■□□□□ 0.25
PTPN20-206ENST00000395722 HDAC6Q9UBN7 1215 aa16.63■□□□□ 0.25
PTPN20-206ENST00000395722 TBX20Q9UMR3 447 aa16.63■□□□□ 0.25
PTPN20-206ENST00000395722 SMIM35A0A1B0GVV1 85 aa16.62■□□□□ 0.25
PTPN20-206ENST00000395722 DENND3A2RUS2 1198 aa16.62■□□□□ 0.25
PTPN20-206ENST00000395722 ATP1A3P13637 1013 aa16.62■□□□□ 0.25
PTPN20-206ENST00000395722 CTCFP49711 727 aaPredicted RBP16.62■□□□□ 0.25
PTPN20-206ENST00000395722 NBPF20Q3BBV1 942 aa16.62■□□□□ 0.25
PTPN20-206ENST00000395722 NFRKBQ6P4R8 1299 aa16.62■□□□□ 0.25
PTPN20-206ENST00000395722 KIAA0319LQ8IZA0 1049 aa16.62■□□□□ 0.25
PTPN20-206ENST00000395722 SRRTQ9BXP5 876 aaKnown RBP16.62■□□□□ 0.25
PTPN20-206ENST00000395722 TMEM134Q9H6X4 195 aa16.62■□□□□ 0.25
PTPN20-206ENST00000395722 C17orf102A2RUQ5 167 aa16.62■□□□□ 0.25
PTPN20-206ENST00000395722 MOXD2PA6NHM9 499 aa16.62■□□□□ 0.25
PTPN20-206ENST00000395722 HSPA1AP0DMV8 641 aaKnown RBP16.62■□□□□ 0.25
PTPN20-206ENST00000395722 HSPA1BP0DMV9 641 aaKnown RBP16.62■□□□□ 0.25
PTPN20-206ENST00000395722 TMOD1P28289 359 aa16.62■□□□□ 0.25
PTPN20-206ENST00000395722 SNRPFP62306 86 aaKnown RBP16.62■□□□□ 0.25
PTPN20-206ENST00000395722 FKBP3Q00688 224 aaKnown RBP16.62■□□□□ 0.25
PTPN20-206ENST00000395722 TPD52L1Q16890 204 aaPredicted RBP16.62■□□□□ 0.25
PTPN20-206ENST00000395722 FBXO46Q6PJ61 603 aaPredicted RBP16.62■□□□□ 0.25
PTPN20-206ENST00000395722 IFNLR1Q8IU57 520 aaPredicted RBP16.62■□□□□ 0.25
PTPN20-206ENST00000395722 C7orf31Q8N865 590 aa16.62■□□□□ 0.25
PTPN20-206ENST00000395722 DEPTORQ8TB45 409 aa16.62■□□□□ 0.25
PTPN20-206ENST00000395722 NFKBIZQ9BYH8 718 aa16.62■□□□□ 0.25
PTPN20-206ENST00000395722 GBP3Q9H0R5 595 aa16.62■□□□□ 0.25
PTPN20-206ENST00000395722 GRIN2DO15399 1336 aa16.61■□□□□ 0.25
PTPN20-206ENST00000395722 LRRIQ4A6NIV6 560 aa16.61■□□□□ 0.25
PTPN20-206ENST00000395722 CALUO43852 315 aaPredicted RBP16.61■□□□□ 0.25
PTPN20-206ENST00000395722 GNAT1P11488 350 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms