RNA–Protein interactions for RNA: ENST00000395454.6

SCAF11-204, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF11, Length 1,931 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-204ENST00000395454 GUCY2CP25092 1073 aa16.62■□□□□ 0.25
SCAF11-204ENST00000395454 DNAJC7Q99615 494 aa16.62■□□□□ 0.25
SCAF11-204ENST00000395454 NUP58Q9BVL2 599 aa16.62■□□□□ 0.25
SCAF11-204ENST00000395454 ZNF302Q9NR11 478 aa16.62■□□□□ 0.25
SCAF11-204ENST00000395454 SEL1LQ9UBV2 794 aa16.62■□□□□ 0.25
SCAF11-204ENST00000395454 ODF2LQ9ULJ1 636 aa16.62■□□□□ 0.25
SCAF11-204ENST00000395454 CAPN11Q9UMQ6 739 aa16.62■□□□□ 0.25
SCAF11-204ENST00000395454 PAXBP1Q9Y5B6 917 aa16.62■□□□□ 0.25
SCAF11-204ENST00000395454 GOLGA6L9A6NEM1 432 aa16.62■□□□□ 0.25
SCAF11-204ENST00000395454 GNA14O95837 355 aa16.62■□□□□ 0.25
SCAF11-204ENST00000395454 PRKCSHP14314 528 aaPredicted RBP16.62■□□□□ 0.25
SCAF11-204ENST00000395454 MTIF2P46199 727 aaKnown RBP16.62■□□□□ 0.25
SCAF11-204ENST00000395454 QARSP47897 775 aaKnown RBP16.62■□□□□ 0.25
SCAF11-204ENST00000395454 STAT5BP51692 787 aa16.62■□□□□ 0.25
SCAF11-204ENST00000395454 UGCGQ16739 394 aa16.62■□□□□ 0.25
SCAF11-204ENST00000395454 SFR1Q86XK3 245 aa16.62■□□□□ 0.25
SCAF11-204ENST00000395454 NOC4LQ9BVI4 516 aaKnown RBP16.62■□□□□ 0.25
SCAF11-204ENST00000395454 TRMT1Q9NXH9 659 aaKnown RBP16.62■□□□□ 0.25
SCAF11-204ENST00000395454 IGKV6D-21A0A0A0MT36 114 aa16.61■□□□□ 0.25
SCAF11-204ENST00000395454 A0A1W2PQJ5 194 aa16.61■□□□□ 0.25
SCAF11-204ENST00000395454 RNF225M0QZC1 329 aaPredicted RBP16.61■□□□□ 0.25
SCAF11-204ENST00000395454 EIF3DO15371 548 aaKnown RBP eCLIP16.61■□□□□ 0.25
SCAF11-204ENST00000395454 ZEB2O60315 1214 aa16.61■□□□□ 0.25
SCAF11-204ENST00000395454 MYL3P08590 195 aa16.61■□□□□ 0.25
SCAF11-204ENST00000395454 MARK3P27448 753 aa16.61■□□□□ 0.25
SCAF11-204ENST00000395454 HOXD13P35453 343 aa16.61■□□□□ 0.25
SCAF11-204ENST00000395454 CASP5P51878 434 aa16.61■□□□□ 0.25
SCAF11-204ENST00000395454 CHMP4BP1P59074 171 aa16.61■□□□□ 0.25
SCAF11-204ENST00000395454 PSMC5P62195 406 aa16.61■□□□□ 0.25
SCAF11-204ENST00000395454 CACNB1Q02641 598 aaPredicted RBP16.61■□□□□ 0.25
SCAF11-204ENST00000395454 VWA3BQ502W6 1294 aa16.61■□□□□ 0.25
SCAF11-204ENST00000395454 FAM160B1Q5W0V3 765 aa16.61■□□□□ 0.25
SCAF11-204ENST00000395454 ATP6V0A1Q93050 837 aa16.61■□□□□ 0.25
SCAF11-204ENST00000395454 PCYT2Q99447 389 aa16.61■□□□□ 0.25
SCAF11-204ENST00000395454 DBR1Q9UK59 544 aaKnown RBP16.61■□□□□ 0.25
SCAF11-204ENST00000395454 PPP2R2CQ9Y2T4 447 aa16.61■□□□□ 0.25
SCAF11-204ENST00000395454 UBE4BO95155 1302 aa16.61■□□□□ 0.25
SCAF11-204ENST00000395454 EMSYQ7Z589 1322 aa16.61■□□□□ 0.25
SCAF11-204ENST00000395454 TTC26A0AVF1 554 aa16.6■□□□□ 0.25
SCAF11-204ENST00000395454 TBCAO75347 108 aaKnown RBP16.6■□□□□ 0.25
SCAF11-204ENST00000395454 HOXD8P13378 290 aaPredicted RBP16.6■□□□□ 0.25
SCAF11-204ENST00000395454 KCNA10Q16322 511 aa16.6■□□□□ 0.25
SCAF11-204ENST00000395454 NFIL3Q16649 462 aa16.6■□□□□ 0.25
SCAF11-204ENST00000395454 TMTC1Q8IUR5 882 aa16.6■□□□□ 0.25
SCAF11-204ENST00000395454 PCSK9Q8NBP7 692 aaKnown RBP16.6■□□□□ 0.25
SCAF11-204ENST00000395454 ARRDC4Q8NCT1 418 aa16.6■□□□□ 0.25
SCAF11-204ENST00000395454 KLHDC9Q8NEP7 349 aa16.6■□□□□ 0.25
SCAF11-204ENST00000395454 PIGOQ8TEQ8 1089 aa16.6■□□□□ 0.25
SCAF11-204ENST00000395454 U2AF1L4Q8WU68 220 aaKnown RBP16.6■□□□□ 0.25
SCAF11-204ENST00000395454 FIZ1Q96SL8 496 aa16.6■□□□□ 0.25
SCAF11-204ENST00000395454 NDST4Q9H3R1 872 aa16.6■□□□□ 0.25
SCAF11-204ENST00000395454 SMARCAD1Q9H4L7 1026 aa16.6■□□□□ 0.25
SCAF11-204ENST00000395454 ZSWIM4Q9H7M6 989 aa16.6■□□□□ 0.25
SCAF11-204ENST00000395454 ZNF215Q9UL58 517 aaPredicted RBP16.6■□□□□ 0.25
SCAF11-204ENST00000395454 SIK3Q9Y2K2 1263 aa16.6■□□□□ 0.25
SCAF11-204ENST00000395454 MAFBQ9Y5Q3 323 aaPredicted RBP16.6■□□□□ 0.25
SCAF11-204ENST00000395454 IGSF9BQ9UPX0 1349 aa16.6■□□□□ 0.25
SCAF11-204ENST00000395454 PDXKO00764 312 aa16.6■□□□□ 0.25
SCAF11-204ENST00000395454 LGR5O75473 907 aa16.6■□□□□ 0.25
SCAF11-204ENST00000395454 ASGR1P07306 291 aa16.6■□□□□ 0.25
SCAF11-204ENST00000395454 GJB1P08034 283 aa16.6■□□□□ 0.25
SCAF11-204ENST00000395454 CST5P28325 142 aaPredicted RBP16.6■□□□□ 0.25
SCAF11-204ENST00000395454 NKX3-2P78367 333 aa16.6■□□□□ 0.25
SCAF11-204ENST00000395454 TBC1D8BQ0IIM8 1120 aa16.6■□□□□ 0.25
SCAF11-204ENST00000395454 KNOP1Q1ED39 458 aaKnown RBP16.6■□□□□ 0.25
SCAF11-204ENST00000395454 AFAP1L1Q8TED9 768 aa16.6■□□□□ 0.25
SCAF11-204ENST00000395454 EEF2KMTQ96G04 330 aa16.6■□□□□ 0.25
SCAF11-204ENST00000395454 C16orf70Q9BSU1 422 aa16.6■□□□□ 0.25
SCAF11-204ENST00000395454 TMEM106CQ9BVX2 250 aa16.6■□□□□ 0.25
SCAF11-204ENST00000395454 ERAP1Q9NZ08 941 aa16.6■□□□□ 0.25
SCAF11-204ENST00000395454 RSPH10B2B2RC85 870 aa16.59■□□□□ 0.25
SCAF11-204ENST00000395454 H3BRB1 525 aa16.59■□□□□ 0.25
SCAF11-204ENST00000395454 SGPL1O95470 568 aa16.59■□□□□ 0.25
SCAF11-204ENST00000395454 RSPH10BP0C881 870 aa16.59■□□□□ 0.25
SCAF11-204ENST00000395454 KRT9P35527 623 aa16.59■□□□□ 0.25
SCAF11-204ENST00000395454 PURAQ00577 322 aaKnown RBP16.59■□□□□ 0.25
SCAF11-204ENST00000395454 PRKCEQ02156 737 aa16.59■□□□□ 0.25
SCAF11-204ENST00000395454 RAD51AP2Q09MP3 1159 aa16.59■□□□□ 0.25
SCAF11-204ENST00000395454 MEA1Q16626 185 aa16.59■□□□□ 0.25
SCAF11-204ENST00000395454 FKBP15Q5T1M5 1219 aa16.59■□□□□ 0.25
SCAF11-204ENST00000395454 COL13A1Q5TAT6 717 aaPredicted RBP16.59■□□□□ 0.25
SCAF11-204ENST00000395454 CXCL17Q6UXB2 119 aa16.59■□□□□ 0.25
SCAF11-204ENST00000395454 RAD9BQ6WBX8 426 aa16.59■□□□□ 0.25
SCAF11-204ENST00000395454 TOGARAM2Q6ZUX3 1019 aa16.59■□□□□ 0.25
SCAF11-204ENST00000395454 PLPPR4Q7Z2D5 763 aa16.59■□□□□ 0.25
SCAF11-204ENST00000395454 TRIM59Q8IWR1 403 aa16.59■□□□□ 0.25
SCAF11-204ENST00000395454 TUT1Q9H6E5 874 aaKnown RBP16.59■□□□□ 0.25
SCAF11-204ENST00000395454 TBC1D7Q9P0N9 293 aa16.59■□□□□ 0.25
SCAF11-204ENST00000395454 OGDHLQ9ULD0 1010 aa16.59■□□□□ 0.25
SCAF11-204ENST00000395454 ZNF862O60290 1169 aa16.58■□□□□ 0.25
SCAF11-204ENST00000395454 DKC1O60832 514 aaKnown RBP eCLIP16.58■□□□□ 0.25
SCAF11-204ENST00000395454 TFRCP02786 760 aaKnown RBP16.58■□□□□ 0.25
SCAF11-204ENST00000395454 SYCP1Q15431 976 aa16.58■□□□□ 0.25
SCAF11-204ENST00000395454 CCSAPQ6IQ19 270 aaPredicted RBP16.58■□□□□ 0.25
SCAF11-204ENST00000395454 TRIM65Q6PJ69 517 aa16.58■□□□□ 0.25
SCAF11-204ENST00000395454 C4orf19Q8IY42 314 aa16.58■□□□□ 0.25
SCAF11-204ENST00000395454 OR8K1Q8NGG5 319 aa16.58■□□□□ 0.25
SCAF11-204ENST00000395454 PARVGQ9HBI0 331 aa16.58■□□□□ 0.25
SCAF11-204ENST00000395454 LUC7L2Q9Y383 392 aaKnown RBP16.58■□□□□ 0.25
SCAF11-204ENST00000395454 ARID2Q68CP9 1835 aa16.58■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 121.9 ms