RNA–Protein interactions for RNA: ENST00000395358.7

RAPGEF3-202, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 2 BASIC

Gene RAPGEF3, Length 4,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-202ENST00000395358 PRELID1Q9Y255 219 aa12.19□□□□□ -0.46
RAPGEF3-202ENST00000395358 STAMBPO95630 424 aa12.19□□□□□ -0.46
RAPGEF3-202ENST00000395358 ATP5DP30049 168 aa12.19□□□□□ -0.46
RAPGEF3-202ENST00000395358 NEK2P51955 445 aa12.19□□□□□ -0.46
RAPGEF3-202ENST00000395358 TRIM67Q6ZTA4 783 aa12.19□□□□□ -0.46
RAPGEF3-202ENST00000395358 MS4A14Q96JA4 679 aa12.19□□□□□ -0.46
RAPGEF3-202ENST00000395358 TDRD3Q9H7E2 651 aaKnown RBP12.19□□□□□ -0.46
RAPGEF3-202ENST00000395358 METTL5Q9NRN9 209 aaKnown RBP12.19□□□□□ -0.46
RAPGEF3-202ENST00000395358 ARHGEF38Q9NXL2 777 aa12.19□□□□□ -0.46
RAPGEF3-202ENST00000395358 ARL2BPQ9Y2Y0 163 aa12.19□□□□□ -0.46
RAPGEF3-202ENST00000395358 TCP11X1B4DZS4 312 aa12.19□□□□□ -0.46
RAPGEF3-202ENST00000395358 GFPT2O94808 682 aa12.19□□□□□ -0.46
RAPGEF3-202ENST00000395358 KRT16P08779 473 aa12.19□□□□□ -0.46
RAPGEF3-202ENST00000395358 CCNFP41002 786 aa12.19□□□□□ -0.46
RAPGEF3-202ENST00000395358 PDE1BQ01064 536 aa12.19□□□□□ -0.46
RAPGEF3-202ENST00000395358 ITGB3BPQ13352 177 aaPredicted RBP12.19□□□□□ -0.46
RAPGEF3-202ENST00000395358 KRT40Q6A162 431 aa12.19□□□□□ -0.46
RAPGEF3-202ENST00000395358 ANO7Q6IWH7 933 aa12.19□□□□□ -0.46
RAPGEF3-202ENST00000395358 CCNJLQ8IV13 435 aa12.19□□□□□ -0.46
RAPGEF3-202ENST00000395358 RBBP8NLQ8NC74 664 aaPredicted RBP12.19□□□□□ -0.46
RAPGEF3-202ENST00000395358 CAVIN3Q969G5 261 aa12.19□□□□□ -0.46
RAPGEF3-202ENST00000395358 MMTAG2Q9BU76 263 aaKnown RBP12.19□□□□□ -0.46
RAPGEF3-202ENST00000395358 RNPEPL1Q9HAU8 725 aa12.19□□□□□ -0.46
RAPGEF3-202ENST00000395358 TUBE1Q9UJT0 475 aa12.19□□□□□ -0.46
RAPGEF3-202ENST00000395358 NUP98P52948 1817 aa12.19□□□□□ -0.46
RAPGEF3-202ENST00000395358 PDE2AO00408 941 aaPredicted RBP12.18□□□□□ -0.46
RAPGEF3-202ENST00000395358 ACTN4O43707 911 aaKnown RBP12.18□□□□□ -0.46
RAPGEF3-202ENST00000395358 EIF3BP55884 814 aaKnown RBP12.18□□□□□ -0.46
RAPGEF3-202ENST00000395358 PAPD7Q5XG87 772 aaKnown RBP12.18□□□□□ -0.46
RAPGEF3-202ENST00000395358 HHIPL2Q6UWX4 724 aa12.18□□□□□ -0.46
RAPGEF3-202ENST00000395358 RFX8Q6ZV50 586 aa12.18□□□□□ -0.46
RAPGEF3-202ENST00000395358 STK32AQ8WU08 396 aa12.18□□□□□ -0.46
RAPGEF3-202ENST00000395358 CSRNP1Q96S65 589 aa12.18□□□□□ -0.46
RAPGEF3-202ENST00000395358 NOC4LQ9BVI4 516 aaKnown RBP12.18□□□□□ -0.46
RAPGEF3-202ENST00000395358 MXD3Q9BW11 206 aa12.18□□□□□ -0.46
RAPGEF3-202ENST00000395358 BLZF1Q9H2G9 400 aa12.18□□□□□ -0.46
RAPGEF3-202ENST00000395358 SERPINB13Q9UIV8 391 aa12.18□□□□□ -0.46
RAPGEF3-202ENST00000395358 ANGPTL2Q9UKU9 493 aa12.18□□□□□ -0.46
RAPGEF3-202ENST00000395358 TJP1Q07157 1748 aa12.18□□□□□ -0.46
RAPGEF3-202ENST00000395358 PAPPAQ13219 1627 aa12.18□□□□□ -0.46
RAPGEF3-202ENST00000395358 ZSCAN5CA6NGD5 496 aaPredicted RBP12.18□□□□□ -0.46
RAPGEF3-202ENST00000395358 ATP5HO75947 161 aa12.18□□□□□ -0.46
RAPGEF3-202ENST00000395358 CCDC166P0CW27 439 aa12.18□□□□□ -0.46
RAPGEF3-202ENST00000395358 LENG1Q96BZ8 264 aaPredicted RBP12.18□□□□□ -0.46
RAPGEF3-202ENST00000395358 PPP1R14BQ96C90 147 aa12.18□□□□□ -0.46
RAPGEF3-202ENST00000395358 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.18□□□□□ -0.46
RAPGEF3-202ENST00000395358 FAM207AQ9NSI2 230 aaPredicted RBP12.18□□□□□ -0.46
RAPGEF3-202ENST00000395358 SEPT11Q9NVA2 429 aaKnown RBP12.18□□□□□ -0.46
RAPGEF3-202ENST00000395358 THEGQ9P2T0 379 aa12.18□□□□□ -0.46
RAPGEF3-202ENST00000395358 BARX2Q9UMQ3 279 aaPredicted RBP12.18□□□□□ -0.46
RAPGEF3-202ENST00000395358 DAGLAQ9Y4D2 1042 aa12.18□□□□□ -0.46
RAPGEF3-202ENST00000395358 FAM205AQ6ZU69 1335 aa12.18□□□□□ -0.46
RAPGEF3-202ENST00000395358 TTC26A0AVF1 554 aa12.18□□□□□ -0.46
RAPGEF3-202ENST00000395358 GALK1P51570 392 aa12.18□□□□□ -0.46
RAPGEF3-202ENST00000395358 ALX1Q15699 326 aa12.18□□□□□ -0.46
RAPGEF3-202ENST00000395358 TBC1D10BQ4KMP7 808 aaPredicted RBP12.18□□□□□ -0.46
RAPGEF3-202ENST00000395358 FYB2Q5VWT5 728 aa12.18□□□□□ -0.46
RAPGEF3-202ENST00000395358 DCAF15Q66K64 600 aa12.18□□□□□ -0.46
RAPGEF3-202ENST00000395358 ZNF280DQ6N043 979 aa12.18□□□□□ -0.46
RAPGEF3-202ENST00000395358 LRIG3Q6UXM1 1119 aa12.18□□□□□ -0.46
RAPGEF3-202ENST00000395358 ANO5Q75V66 913 aa12.18□□□□□ -0.46
RAPGEF3-202ENST00000395358 AGGF1Q8N302 714 aaeCLIP12.18□□□□□ -0.46
RAPGEF3-202ENST00000395358 GFM2Q969S9 779 aaKnown RBP12.18□□□□□ -0.46
RAPGEF3-202ENST00000395358 TTC1Q99614 292 aa12.18□□□□□ -0.46
RAPGEF3-202ENST00000395358 HSD17B3P37058 310 aa12.17□□□□□ -0.46
RAPGEF3-202ENST00000395358 TMEM62Q0P6H9 643 aa12.17□□□□□ -0.46
RAPGEF3-202ENST00000395358 CUL1Q13616 776 aa12.17□□□□□ -0.46
RAPGEF3-202ENST00000395358 FAM47AQ5JRC9 791 aa12.17□□□□□ -0.46
RAPGEF3-202ENST00000395358 METTL16Q86W50 562 aaKnown RBP12.17□□□□□ -0.46
RAPGEF3-202ENST00000395358 AGBL3Q8NEM8 1001 aa12.17□□□□□ -0.46
RAPGEF3-202ENST00000395358 PIP4K2CQ8TBX8 421 aa12.17□□□□□ -0.46
RAPGEF3-202ENST00000395358 PLVAPQ9BX97 442 aa12.17□□□□□ -0.46
RAPGEF3-202ENST00000395358 SH2D4AQ9H788 454 aa12.17□□□□□ -0.46
RAPGEF3-202ENST00000395358 DCP1AQ9NPI6 582 aaPredicted RBP12.17□□□□□ -0.46
RAPGEF3-202ENST00000395358 INTS13Q9NVM9 706 aa12.17□□□□□ -0.46
RAPGEF3-202ENST00000395358 PI4KBQ9UBF8 816 aa12.17□□□□□ -0.46
RAPGEF3-202ENST00000395358 RNF14Q9UBS8 474 aa12.17□□□□□ -0.46
RAPGEF3-202ENST00000395358 FBXO9Q9UK97 447 aaPredicted RBP12.17□□□□□ -0.46
RAPGEF3-202ENST00000395358 ZBTB21Q9ULJ3 1066 aa12.17□□□□□ -0.46
RAPGEF3-202ENST00000395358 SCINQ9Y6U3 715 aa12.17□□□□□ -0.46
RAPGEF3-202ENST00000395358 GSG1L2A8MUP6 293 aa12.17□□□□□ -0.46
RAPGEF3-202ENST00000395358 RPS12P25398 132 aaKnown RBP12.17□□□□□ -0.46
RAPGEF3-202ENST00000395358 AGBL2Q5U5Z8 902 aa12.17□□□□□ -0.46
RAPGEF3-202ENST00000395358 LRRC37BQ96QE4 947 aa12.17□□□□□ -0.46
RAPGEF3-202ENST00000395358 AZI2Q9H6S1 392 aa12.17□□□□□ -0.46
RAPGEF3-202ENST00000395358 NLRC4Q9NPP4 1024 aa12.17□□□□□ -0.46
RAPGEF3-202ENST00000395358 PYGMP11217 842 aa12.17□□□□□ -0.46
RAPGEF3-202ENST00000395358 TUFMP49411 452 aaKnown RBP12.17□□□□□ -0.46
RAPGEF3-202ENST00000395358 CACNB3P54284 484 aa12.17□□□□□ -0.46
RAPGEF3-202ENST00000395358 ZNF268Q14587 947 aaPredicted RBP12.17□□□□□ -0.46
RAPGEF3-202ENST00000395358 HAUS3Q68CZ6 603 aa12.17□□□□□ -0.46
RAPGEF3-202ENST00000395358 SESTD1Q86VW0 696 aa12.17□□□□□ -0.46
RAPGEF3-202ENST00000395358 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.17□□□□□ -0.46
RAPGEF3-202ENST00000395358 DKK3Q9UBP4 350 aa12.17□□□□□ -0.46
RAPGEF3-202ENST00000395358 CNOT7Q9UIV1 285 aaKnown RBP12.17□□□□□ -0.46
RAPGEF3-202ENST00000395358 COMMD3-BMI1R4GMX3 469 aa12.17□□□□□ -0.46
RAPGEF3-202ENST00000395358 A6NHS1 94 aa12.16□□□□□ -0.46
RAPGEF3-202ENST00000395358 SRRM3A6NNA2 597 aaPredicted RBP12.16□□□□□ -0.46
RAPGEF3-202ENST00000395358 PDIA3P30101 505 aaKnown RBP12.16□□□□□ -0.46
RAPGEF3-202ENST00000395358 SNX30Q5VWJ9 437 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms