RNA–Protein interactions for RNA: ENST00000395354.1

LMNB1-202, Transcript of lamin B1, humanhuman

TSL 1 (best) BASIC

Gene LMNB1, Length 1,572 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-202ENST00000395354 CCP110O43303 1012 aa21.21■□□□□ 0.99
LMNB1-202ENST00000395354 CALUO43852 315 aaPredicted RBP21.21■□□□□ 0.99
LMNB1-202ENST00000395354 KPNA6O60684 536 aa21.21■□□□□ 0.99
LMNB1-202ENST00000395354 MFAP3LO75121 409 aa21.21■□□□□ 0.99
LMNB1-202ENST00000395354 SGPL1O95470 568 aa21.21■□□□□ 0.99
LMNB1-202ENST00000395354 LGALS2P05162 132 aa21.21■□□□□ 0.99
LMNB1-202ENST00000395354 MYL3P08590 195 aa21.21■□□□□ 0.99
LMNB1-202ENST00000395354 CST5P28325 142 aaPredicted RBP21.21■□□□□ 0.99
LMNB1-202ENST00000395354 RARRES1P49788 294 aa21.21■□□□□ 0.99
LMNB1-202ENST00000395354 KCNA10Q16322 511 aa21.21■□□□□ 0.99
LMNB1-202ENST00000395354 MIIPQ5JXC2 388 aa21.21■□□□□ 0.99
LMNB1-202ENST00000395354 FKBP15Q5T1M5 1219 aa21.21■□□□□ 0.99
LMNB1-202ENST00000395354 FAM160B1Q5W0V3 765 aa21.21■□□□□ 0.99
LMNB1-202ENST00000395354 TMEM139Q8IV31 216 aa21.21■□□□□ 0.99
LMNB1-202ENST00000395354 MYCT1Q8N699 235 aa21.21■□□□□ 0.99
LMNB1-202ENST00000395354 PCSK9Q8NBP7 692 aaKnown RBP21.21■□□□□ 0.99
LMNB1-202ENST00000395354 RETREG2Q8NC44 543 aa21.21■□□□□ 0.99
LMNB1-202ENST00000395354 C16orf70Q9BSU1 422 aa21.21■□□□□ 0.99
LMNB1-202ENST00000395354 NUP58Q9BVL2 599 aa21.21■□□□□ 0.99
LMNB1-202ENST00000395354 SMARCAD1Q9H4L7 1026 aa21.21■□□□□ 0.99
LMNB1-202ENST00000395354 MAFBQ9Y5Q3 323 aaPredicted RBP21.21■□□□□ 0.99
LMNB1-202ENST00000395354 KIAA0100Q14667 2235 aaKnown RBP21.2■□□□□ 0.98
LMNB1-202ENST00000395354 GYPCP04921 128 aa21.2■□□□□ 0.98
LMNB1-202ENST00000395354 ZNF286BP0CG31 522 aa21.2■□□□□ 0.98
LMNB1-202ENST00000395354 MAPTP10636 758 aaKnown RBP21.2■□□□□ 0.98
LMNB1-202ENST00000395354 YWHABP31946 246 aaKnown RBP21.2■□□□□ 0.98
LMNB1-202ENST00000395354 CASP5P51878 434 aa21.2■□□□□ 0.98
LMNB1-202ENST00000395354 ADKP55263 362 aaKnown RBP21.2■□□□□ 0.98
LMNB1-202ENST00000395354 TBC1D8BQ0IIM8 1120 aa21.2■□□□□ 0.98
LMNB1-202ENST00000395354 UGCGQ16739 394 aa21.2■□□□□ 0.98
LMNB1-202ENST00000395354 VWA3BQ502W6 1294 aa21.2■□□□□ 0.98
LMNB1-202ENST00000395354 CCSAPQ6IQ19 270 aaPredicted RBP21.2■□□□□ 0.98
LMNB1-202ENST00000395354 PLPPR4Q7Z2D5 763 aa21.2■□□□□ 0.98
LMNB1-202ENST00000395354 TRIM50Q86XT4 487 aa21.2■□□□□ 0.98
LMNB1-202ENST00000395354 NELFCDQ8IXH7 590 aa21.2■□□□□ 0.98
LMNB1-202ENST00000395354 CCAR2Q8N163 923 aaKnown RBP21.2■□□□□ 0.98
LMNB1-202ENST00000395354 AFAP1L1Q8TED9 768 aa21.2■□□□□ 0.98
LMNB1-202ENST00000395354 U2AF1L4Q8WU68 220 aaKnown RBP21.2■□□□□ 0.98
LMNB1-202ENST00000395354 ATP6V0A1Q93050 837 aa21.2■□□□□ 0.98
LMNB1-202ENST00000395354 ERGIC2Q96RQ1 377 aa21.2■□□□□ 0.98
LMNB1-202ENST00000395354 TMEM106CQ9BVX2 250 aa21.2■□□□□ 0.98
LMNB1-202ENST00000395354 TYW1Q9NV66 732 aaKnown RBP21.2■□□□□ 0.98
LMNB1-202ENST00000395354 OGDHLQ9ULD0 1010 aa21.2■□□□□ 0.98
LMNB1-202ENST00000395354 EMSYQ7Z589 1322 aa21.2■□□□□ 0.98
LMNB1-202ENST00000395354 TFRCP02786 760 aaKnown RBP21.19■□□□□ 0.98
LMNB1-202ENST00000395354 FECHP22830 423 aa21.19■□□□□ 0.98
LMNB1-202ENST00000395354 CRISPLD2Q9H0B8 497 aa21.19■□□□□ 0.98
LMNB1-202ENST00000395354 MYH9P35579 1960 aaKnown RBP21.19■□□□□ 0.98
LMNB1-202ENST00000395354 H3BRB1 525 aa21.19■□□□□ 0.98
LMNB1-202ENST00000395354 CETN3O15182 167 aa21.19■□□□□ 0.98
LMNB1-202ENST00000395354 GCNT3O95395 438 aa21.19■□□□□ 0.98
LMNB1-202ENST00000395354 ASGR1P07306 291 aa21.19■□□□□ 0.98
LMNB1-202ENST00000395354 MYBP10242 640 aa21.19■□□□□ 0.98
LMNB1-202ENST00000395354 PURAQ00577 322 aaKnown RBP21.19■□□□□ 0.98
LMNB1-202ENST00000395354 ALCAMQ13740 583 aa21.19■□□□□ 0.98
LMNB1-202ENST00000395354 NFIL3Q16649 462 aa21.19■□□□□ 0.98
LMNB1-202ENST00000395354 FIGNQ5HY92 759 aa21.19■□□□□ 0.98
LMNB1-202ENST00000395354 COL13A1Q5TAT6 717 aaPredicted RBP21.19■□□□□ 0.98
LMNB1-202ENST00000395354 CXCL17Q6UXB2 119 aa21.19■□□□□ 0.98
LMNB1-202ENST00000395354 OTUD6AQ7L8S5 288 aa21.19■□□□□ 0.98
LMNB1-202ENST00000395354 TSEN34Q9BSV6 310 aaKnown RBP21.19■□□□□ 0.98
LMNB1-202ENST00000395354 NDST4Q9H3R1 872 aa21.19■□□□□ 0.98
LMNB1-202ENST00000395354 TUT1Q9H6E5 874 aaKnown RBP21.19■□□□□ 0.98
LMNB1-202ENST00000395354 ERAP1Q9NZ08 941 aa21.19■□□□□ 0.98
LMNB1-202ENST00000395354 WDR81Q562E7 1941 aa21.18■□□□□ 0.98
LMNB1-202ENST00000395354 PES1O00541 588 aaKnown RBP21.18■□□□□ 0.98
LMNB1-202ENST00000395354 ZNF862O60290 1169 aa21.18■□□□□ 0.98
LMNB1-202ENST00000395354 HIP1RO75146 1068 aa21.18■□□□□ 0.98
LMNB1-202ENST00000395354 RPL13P26373 211 aaKnown RBP21.18■□□□□ 0.98
LMNB1-202ENST00000395354 CASP14P31944 242 aa21.18■□□□□ 0.98
LMNB1-202ENST00000395354 HOXD13P35453 343 aa21.18■□□□□ 0.98
LMNB1-202ENST00000395354 SLC26A2P50443 739 aa21.18■□□□□ 0.98
LMNB1-202ENST00000395354 MAPK7Q13164 816 aa21.18■□□□□ 0.98
LMNB1-202ENST00000395354 ADAM9Q13443 819 aa21.18■□□□□ 0.98
LMNB1-202ENST00000395354 DNTTIP2Q5QJE6 756 aaKnown RBP21.18■□□□□ 0.98
LMNB1-202ENST00000395354 CEP135Q66GS9 1140 aa21.18■□□□□ 0.98
LMNB1-202ENST00000395354 E4F1Q66K89 784 aaPredicted RBP21.18■□□□□ 0.98
LMNB1-202ENST00000395354 ZNF720Q7Z2F6 126 aa21.18■□□□□ 0.98
LMNB1-202ENST00000395354 TRMT1LQ7Z2T5 733 aaKnown RBP21.18■□□□□ 0.98
LMNB1-202ENST00000395354 FAM178BQ8IXR5 827 aa21.18■□□□□ 0.98
LMNB1-202ENST00000395354 EEF2KMTQ96G04 330 aa21.18■□□□□ 0.98
LMNB1-202ENST00000395354 CCDC43Q96MW1 224 aaKnown RBP21.18■□□□□ 0.98
LMNB1-202ENST00000395354 FIZ1Q96SL8 496 aa21.18■□□□□ 0.98
LMNB1-202ENST00000395354 LARSQ9P2J5 1176 aaKnown RBP21.18■□□□□ 0.98
LMNB1-202ENST00000395354 ZNF215Q9UL58 517 aaPredicted RBP21.18■□□□□ 0.98
LMNB1-202ENST00000395354 PCDHB13Q9Y5F0 798 aa21.18■□□□□ 0.98
LMNB1-202ENST00000395354 IGSF9BQ9UPX0 1349 aa21.17■□□□□ 0.98
LMNB1-202ENST00000395354 PRPF6O94906 941 aaKnown RBP21.17■□□□□ 0.98
LMNB1-202ENST00000395354 ATP4AP20648 1035 aa21.17■□□□□ 0.98
LMNB1-202ENST00000395354 MARK3P27448 753 aa21.17■□□□□ 0.98
LMNB1-202ENST00000395354 GJA8P48165 433 aa21.17■□□□□ 0.98
LMNB1-202ENST00000395354 GOLGA8FQ08AF8 430 aa21.17■□□□□ 0.98
LMNB1-202ENST00000395354 GOLGA8DPQ0D2H9 430 aa21.17■□□□□ 0.98
LMNB1-202ENST00000395354 ODR4Q5SWX8 454 aa21.17■□□□□ 0.98
LMNB1-202ENST00000395354 SLC17A8Q8NDX2 589 aa21.17■□□□□ 0.98
LMNB1-202ENST00000395354 KAT2BQ92831 832 aa21.17■□□□□ 0.98
LMNB1-202ENST00000395354 MTG1Q9BT17 334 aaPredicted RBP21.17■□□□□ 0.98
LMNB1-202ENST00000395354 FRMPD3Q5JV73 1810 aa21.17■□□□□ 0.98
LMNB1-202ENST00000395354 SFI1A8K8P3 1242 aa21.16■□□□□ 0.98
LMNB1-202ENST00000395354 F2P00734 622 aa21.16■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms