RNA–Protein interactions for RNA: ENST00000395303.7

HLA-DMA-202, Transcript of major histocompatibility complex, class II, DM alpha, humanhuman

BASIC

Gene HLA-DMA, Length 1,007 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMA-202ENST00000395303 DGKIO75912 1065 aa14.87□□□□□ -0.03
HLA-DMA-202ENST00000395303 BMP15O95972 392 aa14.87□□□□□ -0.03
HLA-DMA-202ENST00000395303 LINC00271P0C7V0 271 aa14.87□□□□□ -0.03
HLA-DMA-202ENST00000395303 STAG3L1P0CL83 205 aa14.87□□□□□ -0.03
HLA-DMA-202ENST00000395303 ARL2P36404 184 aa14.87□□□□□ -0.03
HLA-DMA-202ENST00000395303 MRPS5P82675 430 aaKnown RBP14.87□□□□□ -0.03
HLA-DMA-202ENST00000395303 POU5F1BQ06416 359 aa14.87□□□□□ -0.03
HLA-DMA-202ENST00000395303 ECM1Q16610 540 aa14.87□□□□□ -0.03
HLA-DMA-202ENST00000395303 HYIQ5T013 277 aa14.87□□□□□ -0.03
HLA-DMA-202ENST00000395303 POTEGQ6S5H5 508 aa14.87□□□□□ -0.03
HLA-DMA-202ENST00000395303 SLC24A5Q71RS6 500 aa14.87□□□□□ -0.03
HLA-DMA-202ENST00000395303 SRGAP1Q7Z6B7 1085 aa14.87□□□□□ -0.03
HLA-DMA-202ENST00000395303 IFNLR1Q8IU57 520 aaPredicted RBP14.87□□□□□ -0.03
HLA-DMA-202ENST00000395303 KSR1Q8IVT5 923 aa14.87□□□□□ -0.03
HLA-DMA-202ENST00000395303 PRPF31Q8WWY3 499 aaKnown RBP14.87□□□□□ -0.03
HLA-DMA-202ENST00000395303 NLRP7Q8WX94 980 aa14.87□□□□□ -0.03
HLA-DMA-202ENST00000395303 TMEM143Q96AN5 459 aa14.87□□□□□ -0.03
HLA-DMA-202ENST00000395303 TGS1Q96RS0 853 aaKnown RBP14.87□□□□□ -0.03
HLA-DMA-202ENST00000395303 MMTAG2Q9BU76 263 aaKnown RBP14.87□□□□□ -0.03
HLA-DMA-202ENST00000395303 ELAC1Q9H777 363 aaKnown RBP14.87□□□□□ -0.03
HLA-DMA-202ENST00000395303 RNF216Q9NWF9 866 aaPredicted RBP14.87□□□□□ -0.03
HLA-DMA-202ENST00000395303 MTMR6Q9Y217 621 aa14.87□□□□□ -0.03
HLA-DMA-202ENST00000395303 TRIP11Q15643 1979 aa14.87□□□□□ -0.03
HLA-DMA-202ENST00000395303 PLXNA4Q9HCM2 1894 aa14.86□□□□□ -0.03
HLA-DMA-202ENST00000395303 TDRD15B5MCY1 1934 aaKnown RBP14.86□□□□□ -0.03
HLA-DMA-202ENST00000395303 A0A087WWV3 80 aa14.86□□□□□ -0.03
HLA-DMA-202ENST00000395303 EPOPA6NHQ4 379 aa14.86□□□□□ -0.03
HLA-DMA-202ENST00000395303 STX6O43752 255 aa14.86□□□□□ -0.03
HLA-DMA-202ENST00000395303 CCT6AP40227 531 aaKnown RBP14.86□□□□□ -0.03
HLA-DMA-202ENST00000395303 LAMTOR4Q0VGL1 99 aa14.86□□□□□ -0.03
HLA-DMA-202ENST00000395303 MXD4Q14582 209 aaPredicted RBP14.86□□□□□ -0.03
HLA-DMA-202ENST00000395303 SPRED2Q7Z698 418 aa14.86□□□□□ -0.03
HLA-DMA-202ENST00000395303 KCTD17Q8N5Z5 321 aa14.86□□□□□ -0.03
HLA-DMA-202ENST00000395303 SCLT1Q96NL6 688 aa14.86□□□□□ -0.03
HLA-DMA-202ENST00000395303 SAMD11Q96NU1 681 aa14.86□□□□□ -0.03
HLA-DMA-202ENST00000395303 YME1L1Q96TA2 773 aa14.86□□□□□ -0.03
HLA-DMA-202ENST00000395303 TRAIPQ9BWF2 469 aa14.86□□□□□ -0.03
HLA-DMA-202ENST00000395303 CHST12Q9NRB3 414 aa14.86□□□□□ -0.03
HLA-DMA-202ENST00000395303 MORC2Q9Y6X9 1032 aaPredicted RBP14.86□□□□□ -0.03
HLA-DMA-202ENST00000395303 ADGRA3Q8IWK6 1321 aa14.86□□□□□ -0.03
HLA-DMA-202ENST00000395303 DENND3A2RUS2 1198 aa14.85□□□□□ -0.03
HLA-DMA-202ENST00000395303 SLC26A4O43511 780 aa14.85□□□□□ -0.03
HLA-DMA-202ENST00000395303 PDIA4P13667 645 aaKnown RBP14.85□□□□□ -0.03
HLA-DMA-202ENST00000395303 SFPQP23246 707 aaKnown RBP eCLIP14.85□□□□□ -0.03
HLA-DMA-202ENST00000395303 PTENP60484 403 aa14.85□□□□□ -0.03
HLA-DMA-202ENST00000395303 SF3A1Q15459 793 aaKnown RBP14.85□□□□□ -0.03
HLA-DMA-202ENST00000395303 KRT79Q5XKE5 535 aa14.85□□□□□ -0.03
HLA-DMA-202ENST00000395303 CMTR2Q8IYT2 770 aaKnown RBP14.85□□□□□ -0.03
HLA-DMA-202ENST00000395303 MCPH1Q8NEM0 835 aa14.85□□□□□ -0.03
HLA-DMA-202ENST00000395303 SNX29Q8TEQ0 813 aa14.85□□□□□ -0.03
HLA-DMA-202ENST00000395303 CLP1Q92989 425 aaKnown RBP14.85□□□□□ -0.03
HLA-DMA-202ENST00000395303 CCDC43Q96MW1 224 aaKnown RBP14.85□□□□□ -0.03
HLA-DMA-202ENST00000395303 NFKBIZQ9BYH8 718 aa14.85□□□□□ -0.03
HLA-DMA-202ENST00000395303 BMP2KQ9NSY1 1161 aaPredicted RBP14.85□□□□□ -0.03
HLA-DMA-202ENST00000395303 TMEM161AQ9NX61 479 aa14.85□□□□□ -0.03
HLA-DMA-202ENST00000395303 PP2D1A8MPX8 630 aa14.84□□□□□ -0.03
HLA-DMA-202ENST00000395303 RFXAPO00287 272 aa14.84□□□□□ -0.03
HLA-DMA-202ENST00000395303 LPXNO60711 386 aa14.84□□□□□ -0.03
HLA-DMA-202ENST00000395303 USO1O60763 962 aaKnown RBP14.84□□□□□ -0.03
HLA-DMA-202ENST00000395303 CSDE1O75534 798 aaKnown RBP14.84□□□□□ -0.03
HLA-DMA-202ENST00000395303 EYA4O95677 639 aa14.84□□□□□ -0.03
HLA-DMA-202ENST00000395303 ZSCAN20P17040 1043 aaPredicted RBP14.84□□□□□ -0.03
HLA-DMA-202ENST00000395303 CYP11B2P19099 503 aa14.84□□□□□ -0.03
HLA-DMA-202ENST00000395303 FGFR4P22455 802 aa14.84□□□□□ -0.03
HLA-DMA-202ENST00000395303 GLRA2P23416 452 aa14.84□□□□□ -0.03
HLA-DMA-202ENST00000395303 PTPAQ15257 358 aa14.84□□□□□ -0.03
HLA-DMA-202ENST00000395303 PCBP1Q15365 356 aaKnown RBP eCLIP14.84□□□□□ -0.03
HLA-DMA-202ENST00000395303 PADI6Q6TGC4 694 aa14.84□□□□□ -0.03
HLA-DMA-202ENST00000395303 RNF149Q8NC42 400 aa14.84□□□□□ -0.03
HLA-DMA-202ENST00000395303 ASAP3Q8TDY4 903 aa14.84□□□□□ -0.03
HLA-DMA-202ENST00000395303 AK8Q96MA6 479 aa14.84□□□□□ -0.03
HLA-DMA-202ENST00000395303 NLRP4Q96MN2 994 aa14.84□□□□□ -0.03
HLA-DMA-202ENST00000395303 UHRF1Q96T88 793 aaPredicted RBP14.84□□□□□ -0.03
HLA-DMA-202ENST00000395303 ZSCAN16Q9H4T2 348 aaPredicted RBP14.84□□□□□ -0.03
HLA-DMA-202ENST00000395303 MINDY3Q9H8M7 445 aa14.84□□□□□ -0.03
HLA-DMA-202ENST00000395303 FOXD4L1Q9NU39 408 aa14.84□□□□□ -0.03
HLA-DMA-202ENST00000395303 DDX19AQ9NUU7 478 aaKnown RBP14.84□□□□□ -0.03
HLA-DMA-202ENST00000395303 DACT1Q9NYF0 836 aa14.84□□□□□ -0.03
HLA-DMA-202ENST00000395303 KIAA1024Q9UPX6 916 aa14.84□□□□□ -0.03
HLA-DMA-202ENST00000395303 PCDHB7Q9Y5E2 793 aa14.84□□□□□ -0.03
HLA-DMA-202ENST00000395303 A0A0U1RQF3 1178 aa14.83□□□□□ -0.04
HLA-DMA-202ENST00000395303 ARHGEF35A5YM69 484 aa14.83□□□□□ -0.04
HLA-DMA-202ENST00000395303 VWA3AA6NCI4 1184 aa14.83□□□□□ -0.04
HLA-DMA-202ENST00000395303 C5orf67F2Z3F1 127 aa14.83□□□□□ -0.04
HLA-DMA-202ENST00000395303 SRGAP2CP0DJJ0 459 aa14.83□□□□□ -0.04
HLA-DMA-202ENST00000395303 BMP1P13497 986 aa14.83□□□□□ -0.04
HLA-DMA-202ENST00000395303 COL9A1P20849 921 aa14.83□□□□□ -0.04
HLA-DMA-202ENST00000395303 CDC25AP30304 524 aa14.83□□□□□ -0.04
HLA-DMA-202ENST00000395303 TFF2Q03403 129 aa14.83□□□□□ -0.04
HLA-DMA-202ENST00000395303 CAPSQ13938 189 aa14.83□□□□□ -0.04
HLA-DMA-202ENST00000395303 TFDP1Q14186 410 aa14.83□□□□□ -0.04
HLA-DMA-202ENST00000395303 ZNF598Q86UK7 904 aaKnown RBP14.83□□□□□ -0.04
HLA-DMA-202ENST00000395303 ECHDC2Q86YB7 292 aa14.83□□□□□ -0.04
HLA-DMA-202ENST00000395303 FIBCD1Q8N539 461 aa14.83□□□□□ -0.04
HLA-DMA-202ENST00000395303 ARNTL2Q8WYA1 636 aa14.83□□□□□ -0.04
HLA-DMA-202ENST00000395303 PNMA5Q96PV4 448 aa14.83□□□□□ -0.04
HLA-DMA-202ENST00000395303 C17orf80Q9BSJ5 609 aa14.83□□□□□ -0.04
HLA-DMA-202ENST00000395303 CERS4Q9HA82 394 aa14.83□□□□□ -0.04
HLA-DMA-202ENST00000395303 AGPAT5Q9NUQ2 364 aa14.83□□□□□ -0.04
HLA-DMA-202ENST00000395303 RNF19AQ9NV58 838 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms