RNA–Protein interactions for RNA: ENST00000394817.6

SIL1-202, Transcript of SIL1 nucleotide exchange factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIL1, Length 1,923 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIL1-202ENST00000394817 GPS2Q13227 327 aa20.27■□□□□ 0.84
SIL1-202ENST00000394817 ARHGEF16Q5VV41 709 aa20.27■□□□□ 0.84
SIL1-202ENST00000394817 NSMFQ6X4W1 530 aa20.27■□□□□ 0.84
SIL1-202ENST00000394817 REPS2Q8NFH8 660 aa20.27■□□□□ 0.84
SIL1-202ENST00000394817 ACCSQ96QU6 501 aa20.27■□□□□ 0.84
SIL1-202ENST00000394817 STK33Q9BYT3 514 aa20.27■□□□□ 0.84
SIL1-202ENST00000394817 H3BQF6 201 aa20.27■□□□□ 0.84
SIL1-202ENST00000394817 ATP9AO75110 1047 aa20.27■□□□□ 0.84
SIL1-202ENST00000394817 LCTP09848 1927 aa20.27■□□□□ 0.84
SIL1-202ENST00000394817 TRIM49P0CI25 452 aa20.27■□□□□ 0.84
SIL1-202ENST00000394817 TRIM49CP0CI26 452 aa20.27■□□□□ 0.84
SIL1-202ENST00000394817 SOX5P35711 763 aa20.27■□□□□ 0.84
SIL1-202ENST00000394817 OAZ1P54368 228 aa20.27■□□□□ 0.84
SIL1-202ENST00000394817 PSMC5P62195 406 aa20.27■□□□□ 0.84
SIL1-202ENST00000394817 MAEAQ7L5Y9 396 aa20.27■□□□□ 0.84
SIL1-202ENST00000394817 FMNL3Q8IVF7 1028 aa20.27■□□□□ 0.84
SIL1-202ENST00000394817 RDM1Q8NG50 284 aa20.27■□□□□ 0.84
SIL1-202ENST00000394817 CCDC43Q96MW1 224 aaKnown RBP20.27■□□□□ 0.84
SIL1-202ENST00000394817 OTOFQ9HC10 1997 aa20.26■□□□□ 0.83
SIL1-202ENST00000394817 EVI5O60447 810 aa20.26■□□□□ 0.83
SIL1-202ENST00000394817 FTCDO95954 541 aa20.26■□□□□ 0.83
SIL1-202ENST00000394817 CCNE2O96020 404 aa20.26■□□□□ 0.83
SIL1-202ENST00000394817 INTS2Q9H0H0 1204 aaKnown RBP20.26■□□□□ 0.83
SIL1-202ENST00000394817 VIPAS39Q9H9C1 493 aa20.26■□□□□ 0.83
SIL1-202ENST00000394817 PDE11AQ9HCR9 933 aa20.26■□□□□ 0.83
SIL1-202ENST00000394817 ANKEF1Q9NU02 776 aa20.26■□□□□ 0.83
SIL1-202ENST00000394817 APEX2Q9UBZ4 518 aa20.26■□□□□ 0.83
SIL1-202ENST00000394817 INTUQ9ULD6 942 aa20.26■□□□□ 0.83
SIL1-202ENST00000394817 RIPK3Q9Y572 518 aa20.26■□□□□ 0.83
SIL1-202ENST00000394817 TESPA1A2RU30 521 aaPredicted RBP20.25■□□□□ 0.83
SIL1-202ENST00000394817 BACH1O14867 736 aa20.25■□□□□ 0.83
SIL1-202ENST00000394817 RFX1P22670 979 aa20.25■□□□□ 0.83
SIL1-202ENST00000394817 CCND2P30279 289 aa20.25■□□□□ 0.83
SIL1-202ENST00000394817 SNRPFP62306 86 aaKnown RBP20.25■□□□□ 0.83
SIL1-202ENST00000394817 GTF2BQ00403 316 aa20.25■□□□□ 0.83
SIL1-202ENST00000394817 BAATQ14032 418 aaPredicted RBP20.25■□□□□ 0.83
SIL1-202ENST00000394817 PLS1Q14651 629 aa20.25■□□□□ 0.83
SIL1-202ENST00000394817 IFI16Q16666 785 aaKnown RBP20.25■□□□□ 0.83
SIL1-202ENST00000394817 CFAP221Q4G0U5 840 aa20.25■□□□□ 0.83
SIL1-202ENST00000394817 INTS8Q75QN2 995 aaKnown RBP20.25■□□□□ 0.83
SIL1-202ENST00000394817 OLIG1Q8TAK6 271 aa20.25■□□□□ 0.83
SIL1-202ENST00000394817 GPRASP2Q96D09 838 aa20.25■□□□□ 0.83
SIL1-202ENST00000394817 TCEAL9Q9UHQ7 104 aa20.25■□□□□ 0.83
SIL1-202ENST00000394817 ADAMTS5Q9UNA0 930 aa20.25■□□□□ 0.83
SIL1-202ENST00000394817 PAPPA2Q9BXP8 1791 aa20.25■□□□□ 0.83
SIL1-202ENST00000394817 LRRIQ3A6PVS8 624 aaPredicted RBP20.25■□□□□ 0.83
SIL1-202ENST00000394817 POLR3GO15318 223 aaPredicted RBP20.25■□□□□ 0.83
SIL1-202ENST00000394817 KRT13P13646 458 aa20.25■□□□□ 0.83
SIL1-202ENST00000394817 HMGCS2P54868 508 aa20.25■□□□□ 0.83
SIL1-202ENST00000394817 NCKAP1LP55160 1127 aa20.25■□□□□ 0.83
SIL1-202ENST00000394817 ZNF746Q6NUN9 644 aaPredicted RBP20.25■□□□□ 0.83
SIL1-202ENST00000394817 VSIG10LQ86VR7 867 aa20.25■□□□□ 0.83
SIL1-202ENST00000394817 SLC17A8Q8NDX2 589 aa20.25■□□□□ 0.83
SIL1-202ENST00000394817 GPR88Q9GZN0 384 aa20.25■□□□□ 0.83
SIL1-202ENST00000394817 ZMYND15Q9H091 742 aa20.25■□□□□ 0.83
SIL1-202ENST00000394817 SMARCAL1Q9NZC9 954 aa20.25■□□□□ 0.83
SIL1-202ENST00000394817 EHD2Q9NZN4 543 aa20.25■□□□□ 0.83
SIL1-202ENST00000394817 DNAJC12Q9UKB3 198 aa20.25■□□□□ 0.83
SIL1-202ENST00000394817 A0A0A6YYK5 440 aaPredicted RBP20.24■□□□□ 0.83
SIL1-202ENST00000394817 DDX3XO00571 662 aaKnown RBP eCLIP20.24■□□□□ 0.839e-13■■■■□ 22
SIL1-202ENST00000394817 CES2O00748 559 aa20.24■□□□□ 0.83
SIL1-202ENST00000394817 MAPK13O15264 365 aa20.24■□□□□ 0.83
SIL1-202ENST00000394817 USP2O75604 605 aaPredicted RBP20.24■□□□□ 0.83
SIL1-202ENST00000394817 DRAP1Q14919 205 aaPredicted RBP20.24■□□□□ 0.83
SIL1-202ENST00000394817 SUPT20HL1Q3ZLR7 823 aa20.24■□□□□ 0.83
SIL1-202ENST00000394817 CCNI2Q6ZMN8 369 aaPredicted RBP20.24■□□□□ 0.83
SIL1-202ENST00000394817 ILDR2Q71H61 639 aa20.24■□□□□ 0.83
SIL1-202ENST00000394817 HAUS6Q7Z4H7 955 aa20.24■□□□□ 0.83
SIL1-202ENST00000394817 SENP7Q9BQF6 1050 aa20.24■□□□□ 0.83
SIL1-202ENST00000394817 ACBD3Q9H3P7 528 aa20.24■□□□□ 0.83
SIL1-202ENST00000394817 ZNF214Q9UL59 606 aaPredicted RBP20.24■□□□□ 0.83
SIL1-202ENST00000394817 TMEM150BA6NC51 233 aa20.23■□□□□ 0.83
SIL1-202ENST00000394817 N4BP1O75113 896 aaKnown RBP20.23■□□□□ 0.83
SIL1-202ENST00000394817 DSG3P32926 999 aa20.23■□□□□ 0.83
SIL1-202ENST00000394817 SNRNP48Q6IEG0 339 aaKnown RBP20.23■□□□□ 0.83
SIL1-202ENST00000394817 ZNF771Q7L3S4 317 aaPredicted RBP20.23■□□□□ 0.83
SIL1-202ENST00000394817 LRRC57Q8N9N7 239 aa20.23■□□□□ 0.83
SIL1-202ENST00000394817 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.23■□□□□ 0.83
SIL1-202ENST00000394817 SLC30A5Q8TAD4 765 aa20.23■□□□□ 0.83
SIL1-202ENST00000394817 LMO3Q8TAP4 145 aa20.23■□□□□ 0.83
SIL1-202ENST00000394817 INPP4AQ96PE3 977 aaPredicted RBP20.23■□□□□ 0.83
SIL1-202ENST00000394817 IWS1Q96ST2 819 aa20.23■□□□□ 0.83
SIL1-202ENST00000394817 SYT11Q9BT88 431 aa20.23■□□□□ 0.83
SIL1-202ENST00000394817 LRRC1Q9BTT6 524 aa20.23■□□□□ 0.83
SIL1-202ENST00000394817 MYH9P35579 1960 aaKnown RBP20.23■□□□□ 0.83
SIL1-202ENST00000394817 PTPRFP10586 1907 aa20.23■□□□□ 0.83
SIL1-202ENST00000394817 TISP43B9A030 160 aa20.23■□□□□ 0.83
SIL1-202ENST00000394817 C19orf81C9J6K1 198 aa20.23■□□□□ 0.83
SIL1-202ENST00000394817 P4HA2O15460 535 aa20.23■□□□□ 0.83
SIL1-202ENST00000394817 MAFGO15525 162 aa20.23■□□□□ 0.83
SIL1-202ENST00000394817 ZMYND10O75800 440 aa20.23■□□□□ 0.83
SIL1-202ENST00000394817 NR3C2P08235 984 aa20.23■□□□□ 0.83
SIL1-202ENST00000394817 H2AFZP0C0S5 128 aa20.23■□□□□ 0.83
SIL1-202ENST00000394817 MYBL2P10244 700 aa20.23■□□□□ 0.83
SIL1-202ENST00000394817 NOL9Q5SY16 702 aaKnown RBP20.23■□□□□ 0.83
SIL1-202ENST00000394817 H2AFVQ71UI9 128 aa20.23■□□□□ 0.83
SIL1-202ENST00000394817 LNX1Q8TBB1 728 aaPredicted RBP20.23■□□□□ 0.83
SIL1-202ENST00000394817 DCPSQ96C86 337 aaKnown RBP20.23■□□□□ 0.83
SIL1-202ENST00000394817 CBWD1Q9BRT8 395 aa20.23■□□□□ 0.83
SIL1-202ENST00000394817 RBM12Q9NTZ6 932 aaKnown RBP20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms