RNA–Protein interactions for RNA: ENST00000393119.6

MKS1-202, Transcript of Meckel syndrome, type 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MKS1, Length 2,397 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-202ENST00000393119 ZNF263O14978 683 aa16.38■□□□□ 0.21
MKS1-202ENST00000393119 TLR2O60603 784 aa16.38■□□□□ 0.21
MKS1-202ENST00000393119 GNA14O95837 355 aa16.38■□□□□ 0.21
MKS1-202ENST00000393119 GJB1P08034 283 aa16.38■□□□□ 0.21
MKS1-202ENST00000393119 TXNP10599 105 aaKnown RBP16.38■□□□□ 0.21
MKS1-202ENST00000393119 EPB41P11171 864 aaKnown RBP16.38■□□□□ 0.21
MKS1-202ENST00000393119 NCKAP1LP55160 1127 aa16.38■□□□□ 0.21
MKS1-202ENST00000393119 GTF2BQ00403 316 aa16.38■□□□□ 0.21
MKS1-202ENST00000393119 XKR3Q5GH77 459 aa16.38■□□□□ 0.21
MKS1-202ENST00000393119 SLC39A4Q6P5W5 647 aa16.38■□□□□ 0.21
MKS1-202ENST00000393119 CCDC62Q6P9F0 684 aa16.38■□□□□ 0.21
MKS1-202ENST00000393119 HS2ST1Q7LGA3 356 aa16.38■□□□□ 0.21
MKS1-202ENST00000393119 NEK11Q8NG66 645 aa16.38■□□□□ 0.21
MKS1-202ENST00000393119 ZIC5Q96T25 663 aa16.38■□□□□ 0.21
MKS1-202ENST00000393119 GPR20Q99678 358 aa16.38■□□□□ 0.21
MKS1-202ENST00000393119 PNMA3Q9UL41 463 aa16.38■□□□□ 0.21
MKS1-202ENST00000393119 PAXBP1Q9Y5B6 917 aa16.38■□□□□ 0.21
MKS1-202ENST00000393119 DUSP10Q9Y6W6 482 aa16.38■□□□□ 0.21
MKS1-202ENST00000393119 NDUFA10O95299 355 aa16.37■□□□□ 0.21
MKS1-202ENST00000393119 AFPP02771 609 aaKnown RBP16.37■□□□□ 0.21
MKS1-202ENST00000393119 EDN1P05305 212 aa16.37■□□□□ 0.21
MKS1-202ENST00000393119 CCDC175P0C221 793 aa16.37■□□□□ 0.21
MKS1-202ENST00000393119 RPL13P26373 211 aaKnown RBP16.37■□□□□ 0.21
MKS1-202ENST00000393119 PSMC2P35998 433 aaKnown RBP16.37■□□□□ 0.21
MKS1-202ENST00000393119 ZNF157P51786 506 aaPredicted RBP16.37■□□□□ 0.21
MKS1-202ENST00000393119 POLGP54098 1239 aaPredicted RBP16.37■□□□□ 0.21
MKS1-202ENST00000393119 GRM1Q13255 1194 aa16.37■□□□□ 0.21
MKS1-202ENST00000393119 EMC2Q15006 297 aa16.37■□□□□ 0.21
MKS1-202ENST00000393119 METTL7BQ6UX53 244 aa16.37■□□□□ 0.21
MKS1-202ENST00000393119 GLG1Q92896 1179 aa16.37■□□□□ 0.21
MKS1-202ENST00000393119 SPATA33Q96N06 139 aa16.37■□□□□ 0.21
MKS1-202ENST00000393119 POP1Q99575 1024 aaKnown RBP16.37■□□□□ 0.21
MKS1-202ENST00000393119 NAA15Q9BXJ9 866 aaKnown RBP16.37■□□□□ 0.21
MKS1-202ENST00000393119 TBX20Q9UMR3 447 aa16.37■□□□□ 0.21
MKS1-202ENST00000393119 MYH11P35749 1972 aa16.37■□□□□ 0.21
MKS1-202ENST00000393119 ZSCAN12O43309 604 aa16.37■□□□□ 0.21
MKS1-202ENST00000393119 PON1P27169 355 aa16.37■□□□□ 0.21
MKS1-202ENST00000393119 ADCYAP1R1P41586 468 aa16.37■□□□□ 0.21
MKS1-202ENST00000393119 GNG11P61952 73 aa16.37■□□□□ 0.21
MKS1-202ENST00000393119 IRX5P78411 483 aaPredicted RBP16.37■□□□□ 0.21
MKS1-202ENST00000393119 MEA1Q16626 185 aa16.37■□□□□ 0.21
MKS1-202ENST00000393119 ZNF792Q3KQV3 632 aa16.37■□□□□ 0.21
MKS1-202ENST00000393119 PRAMEF19Q5SWL8 479 aa16.37■□□□□ 0.21
MKS1-202ENST00000393119 CELF3Q5SZQ8 465 aaKnown RBP16.37■□□□□ 0.21
MKS1-202ENST00000393119 CACNA2D4Q7Z3S7 1137 aa16.37■□□□□ 0.21
MKS1-202ENST00000393119 GPR142Q7Z601 462 aa16.37■□□□□ 0.21
MKS1-202ENST00000393119 KIF18AQ8NI77 898 aa16.37■□□□□ 0.21
MKS1-202ENST00000393119 ACCSQ96QU6 501 aa16.37■□□□□ 0.21
MKS1-202ENST00000393119 NUP58Q9BVL2 599 aa16.37■□□□□ 0.21
MKS1-202ENST00000393119 TMEM51Q9NW97 253 aa16.37■□□□□ 0.21
MKS1-202ENST00000393119 TTLL13PA6NNM8 815 aa16.36■□□□□ 0.21
MKS1-202ENST00000393119 TFRCP02786 760 aaKnown RBP16.36■□□□□ 0.21
MKS1-202ENST00000393119 ARHGAP25P42331 645 aa16.36■□□□□ 0.21
MKS1-202ENST00000393119 DMP1Q13316 513 aaPredicted RBP16.36■□□□□ 0.21
MKS1-202ENST00000393119 NEDD9Q14511 834 aa16.36■□□□□ 0.21
MKS1-202ENST00000393119 ANKRD23Q86SG2 305 aa16.36■□□□□ 0.21
MKS1-202ENST00000393119 CBWD2Q8IUF1 395 aa16.36■□□□□ 0.21
MKS1-202ENST00000393119 DHX37Q8IY37 1157 aaKnown RBP16.36■□□□□ 0.21
MKS1-202ENST00000393119 LRRC71Q8N4P6 559 aa16.36■□□□□ 0.21
MKS1-202ENST00000393119 SEPT1Q8WYJ6 367 aa16.36■□□□□ 0.21
MKS1-202ENST00000393119 GANQ9H2C0 597 aa16.36■□□□□ 0.21
MKS1-202ENST00000393119 ATP6V0A4Q9HBG4 840 aa16.36■□□□□ 0.21
MKS1-202ENST00000393119 HSPBP1Q9NZL4 362 aa16.36■□□□□ 0.21
MKS1-202ENST00000393119 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.36■□□□□ 0.21
MKS1-202ENST00000393119 FHOD1Q9Y613 1164 aa16.36■□□□□ 0.21
MKS1-202ENST00000393119 V9GYY5 206 aaPredicted RBP16.36■□□□□ 0.21
MKS1-202ENST00000393119 HTTP42858 3142 aa16.36■□□□□ 0.21
MKS1-202ENST00000393119 DGAT1O75907 488 aa16.36■□□□□ 0.21
MKS1-202ENST00000393119 ADRB2P07550 413 aa16.36■□□□□ 0.21
MKS1-202ENST00000393119 ETF1P62495 437 aaKnown RBP16.36■□□□□ 0.21
MKS1-202ENST00000393119 TAPT1Q6NXT6 567 aa16.36■□□□□ 0.21
MKS1-202ENST00000393119 MAMDC4Q6UXC1 1216 aa16.36■□□□□ 0.21
MKS1-202ENST00000393119 NPLOC4Q8TAT6 608 aa16.36■□□□□ 0.21
MKS1-202ENST00000393119 WDR81Q562E7 1941 aa16.35■□□□□ 0.21
MKS1-202ENST00000393119 NOP56O00567 594 aaKnown RBP16.35■□□□□ 0.21
MKS1-202ENST00000393119 ADCY6O43306 1168 aa16.35■□□□□ 0.21
MKS1-202ENST00000393119 SNAI1O95863 264 aaPredicted RBP16.35■□□□□ 0.21
MKS1-202ENST00000393119 MAPTP10636 758 aaKnown RBP16.35■□□□□ 0.21
MKS1-202ENST00000393119 GLRA2P23416 452 aa16.35■□□□□ 0.21
MKS1-202ENST00000393119 EIF4A3P38919 411 aaKnown RBP16.35■□□□□ 0.21
MKS1-202ENST00000393119 FIGNQ5HY92 759 aa16.35■□□□□ 0.21
MKS1-202ENST00000393119 PDXDC1Q6P996 788 aa16.35■□□□□ 0.21
MKS1-202ENST00000393119 RETREG2Q8NC44 543 aa16.35■□□□□ 0.21
MKS1-202ENST00000393119 ZBTB45Q96K62 511 aaPredicted RBP16.35■□□□□ 0.21
MKS1-202ENST00000393119 LACRTQ9GZZ8 138 aa16.35■□□□□ 0.21
MKS1-202ENST00000393119 SUGCTQ9HAC7 445 aa16.35■□□□□ 0.21
MKS1-202ENST00000393119 SIX2Q9NPC8 291 aa16.35■□□□□ 0.21
MKS1-202ENST00000393119 A0A1W2PQJ5 194 aa16.35■□□□□ 0.21
MKS1-202ENST00000393119 CNGA1P29973 690 aa16.35■□□□□ 0.21
MKS1-202ENST00000393119 PPP3CAQ08209 521 aa16.35■□□□□ 0.21
MKS1-202ENST00000393119 MKRN4PQ13434 485 aaPredicted RBP16.35■□□□□ 0.21
MKS1-202ENST00000393119 EXOC3L4Q17RC7 722 aa16.35■□□□□ 0.21
MKS1-202ENST00000393119 TSR1Q2NL82 804 aaKnown RBP16.35■□□□□ 0.21
MKS1-202ENST00000393119 C1orf220Q5T0J3 134 aa16.35■□□□□ 0.21
MKS1-202ENST00000393119 STXBP4Q6ZWJ1 553 aa16.35■□□□□ 0.21
MKS1-202ENST00000393119 RNPEPQ9H4A4 650 aa16.35■□□□□ 0.21
MKS1-202ENST00000393119 TOPORSQ9NS56 1045 aaPredicted RBP16.35■□□□□ 0.21
MKS1-202ENST00000393119 GCNT4Q9P109 453 aa16.35■□□□□ 0.21
MKS1-202ENST00000393119 PLAGL2Q9UPG8 496 aa16.35■□□□□ 0.21
MKS1-202ENST00000393119 FRMD4BQ9Y2L6 1034 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms