RNA–Protein interactions for RNA: ENST00000392871.6

GTDC1-205, Transcript of glycosyltransferase like domain containing 1, humanhuman

TSL 2

Gene GTDC1, Length 2,352 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTDC1-205ENST00000392871 GREB1LQ9C091 1923 aaPredicted RBP4.99□□□□□ -1.61
GTDC1-205ENST00000392871 SLX4Q8IY92 1834 aa4.99□□□□□ -1.61
GTDC1-205ENST00000392871 PLIN4Q96Q06 1357 aa4.99□□□□□ -1.61
GTDC1-205ENST00000392871 TTC24A2A3L6 582 aaPredicted RBP4.99□□□□□ -1.61
GTDC1-205ENST00000392871 PHF20L1A8MW92 1017 aa4.99□□□□□ -1.61
GTDC1-205ENST00000392871 MPHOSPH10O00566 681 aaKnown RBP4.99□□□□□ -1.61
GTDC1-205ENST00000392871 THBS1P07996 1170 aa4.99□□□□□ -1.61
GTDC1-205ENST00000392871 CCDC175P0C221 793 aa4.99□□□□□ -1.61
GTDC1-205ENST00000392871 CASQ1P31415 396 aa4.99□□□□□ -1.61
GTDC1-205ENST00000392871 GNAQP50148 359 aa4.99□□□□□ -1.61
GTDC1-205ENST00000392871 UBXN1Q04323 297 aa4.99□□□□□ -1.61
GTDC1-205ENST00000392871 PTPN11Q06124 597 aaPredicted RBP4.99□□□□□ -1.61
GTDC1-205ENST00000392871 PPP2R3AQ06190 1150 aa4.99□□□□□ -1.61
GTDC1-205ENST00000392871 TCP10Q12799 353 aa4.99□□□□□ -1.61
GTDC1-205ENST00000392871 GRB10Q13322 594 aa4.99□□□□□ -1.61
GTDC1-205ENST00000392871 CCDC96Q2M329 555 aa4.99□□□□□ -1.61
GTDC1-205ENST00000392871 C6orf118Q5T5N4 469 aa4.99□□□□□ -1.61
GTDC1-205ENST00000392871 LYSMD3Q7Z3D4 306 aa4.99□□□□□ -1.61
GTDC1-205ENST00000392871 PODNQ7Z5L7 613 aa4.99□□□□□ -1.61
GTDC1-205ENST00000392871 NCAPG2Q86XI2 1143 aa4.99□□□□□ -1.61
GTDC1-205ENST00000392871 KIAA0895Q8NCT3 520 aa4.99□□□□□ -1.61
GTDC1-205ENST00000392871 MNS1Q8NEH6 495 aa4.99□□□□□ -1.61
GTDC1-205ENST00000392871 STK35Q8TDR2 534 aa4.99□□□□□ -1.61
GTDC1-205ENST00000392871 CCDC34Q96HJ3 373 aa4.99□□□□□ -1.61
GTDC1-205ENST00000392871 NSUN5Q96P11 429 aaKnown RBP4.99□□□□□ -1.61
GTDC1-205ENST00000392871 PNMA5Q96PV4 448 aa4.99□□□□□ -1.61
GTDC1-205ENST00000392871 NUP88Q99567 741 aaPredicted RBP4.99□□□□□ -1.61
GTDC1-205ENST00000392871 SLF1Q9BQI6 1058 aa4.99□□□□□ -1.61
GTDC1-205ENST00000392871 FGFBP2Q9BYJ0 223 aa4.99□□□□□ -1.61
GTDC1-205ENST00000392871 TRIM9Q9C026 710 aa4.99□□□□□ -1.61
GTDC1-205ENST00000392871 PIM2Q9P1W9 311 aa4.99□□□□□ -1.61
GTDC1-205ENST00000392871 PUF60Q9UHX1 559 aaKnown RBP4.99□□□□□ -1.61
GTDC1-205ENST00000392871 MRFAP1Q9Y605 127 aa4.99□□□□□ -1.61
GTDC1-205ENST00000392871 ZNF646O15015 1829 aaPredicted RBP4.98□□□□□ -1.61
GTDC1-205ENST00000392871 IGKV6D-41A0A0C4DH26 115 aa4.98□□□□□ -1.61
GTDC1-205ENST00000392871 TTC26A0AVF1 554 aa4.98□□□□□ -1.61
GTDC1-205ENST00000392871 LGALS16A8MUM7 142 aa4.98□□□□□ -1.61
GTDC1-205ENST00000392871 ECE2O60344 883 aa4.98□□□□□ -1.61
GTDC1-205ENST00000392871 GRIN3BO60391 1043 aa4.98□□□□□ -1.61
GTDC1-205ENST00000392871 RHOBTB3O94955 611 aa4.98□□□□□ -1.61
GTDC1-205ENST00000392871 RARAP10276 462 aa4.98□□□□□ -1.61
GTDC1-205ENST00000392871 ITPKAP23677 461 aa4.98□□□□□ -1.61
GTDC1-205ENST00000392871 ARHGAP25P42331 645 aa4.98□□□□□ -1.61
GTDC1-205ENST00000392871 NOVP48745 357 aa4.98□□□□□ -1.61
GTDC1-205ENST00000392871 ADCY7P51828 1080 aa4.98□□□□□ -1.61
GTDC1-205ENST00000392871 CALCRLQ16602 461 aa4.98□□□□□ -1.61
GTDC1-205ENST00000392871 BRDTQ58F21 947 aaPredicted RBP4.98□□□□□ -1.61
GTDC1-205ENST00000392871 ZNF569Q5MCW4 686 aa4.98□□□□□ -1.61
GTDC1-205ENST00000392871 ANKRD40Q6AI12 368 aa4.98□□□□□ -1.61
GTDC1-205ENST00000392871 ADAMTSL4Q6UY14 1074 aa4.98□□□□□ -1.61
GTDC1-205ENST00000392871 DYMQ7RTS9 669 aa4.98□□□□□ -1.61
GTDC1-205ENST00000392871 RAB44Q7Z6P3 723 aaPredicted RBP4.98□□□□□ -1.61
GTDC1-205ENST00000392871 RTKN2Q8IZC4 609 aa4.98□□□□□ -1.61
GTDC1-205ENST00000392871 ADGRF4Q8IZF3 695 aa4.98□□□□□ -1.61
GTDC1-205ENST00000392871 SLC35F6Q8N357 371 aa4.98□□□□□ -1.61
GTDC1-205ENST00000392871 CEP120Q8N960 986 aa4.98□□□□□ -1.61
GTDC1-205ENST00000392871 GIMAP8Q8ND71 665 aaPredicted RBP4.98□□□□□ -1.61
GTDC1-205ENST00000392871 TBC1D22AQ8WUA7 517 aa4.98□□□□□ -1.61
GTDC1-205ENST00000392871 GATAD2BQ8WXI9 593 aa4.98□□□□□ -1.61
GTDC1-205ENST00000392871 P2RX7Q99572 595 aaKnown RBP4.98□□□□□ -1.61
GTDC1-205ENST00000392871 CCSER1Q9C0I3 900 aa4.98□□□□□ -1.61
GTDC1-205ENST00000392871 CRISPLD1Q9H336 500 aa4.98□□□□□ -1.61
GTDC1-205ENST00000392871 JMJD4Q9H9V9 463 aa4.98□□□□□ -1.61
GTDC1-205ENST00000392871 C6orf50Q9HD87 102 aa4.98□□□□□ -1.61
GTDC1-205ENST00000392871 SLC39A2Q9NP94 309 aa4.98□□□□□ -1.61
GTDC1-205ENST00000392871 BLOC1S4Q9NUP1 217 aa4.98□□□□□ -1.61
GTDC1-205ENST00000392871 USP40Q9NVE5 1235 aa4.98□□□□□ -1.61
GTDC1-205ENST00000392871 RMND1Q9NWS8 449 aa4.98□□□□□ -1.61
GTDC1-205ENST00000392871 ZHX1Q9UKY1 873 aaPredicted RBP4.98□□□□□ -1.61
GTDC1-205ENST00000392871 ZNRF3Q9ULT6 936 aa4.98□□□□□ -1.61
GTDC1-205ENST00000392871 GJA3Q9Y6H8 435 aa4.98□□□□□ -1.61
GTDC1-205ENST00000392871 ITIH6Q6UXX5 1313 aa4.98□□□□□ -1.61
GTDC1-205ENST00000392871 MYMKA6NI61 221 aa4.98□□□□□ -1.61
GTDC1-205ENST00000392871 RASSF10A6NK89 507 aa4.98□□□□□ -1.61
GTDC1-205ENST00000392871 FIGNL2A6NMB9 653 aa4.98□□□□□ -1.61
GTDC1-205ENST00000392871 YDJCA8MPS7 323 aa4.98□□□□□ -1.61
GTDC1-205ENST00000392871 EPHB6O15197 1021 aa4.98□□□□□ -1.61
GTDC1-205ENST00000392871 CCP110O43303 1012 aa4.98□□□□□ -1.61
GTDC1-205ENST00000392871 PPIP5K2O43314 1243 aa4.98□□□□□ -1.61
GTDC1-205ENST00000392871 GDF9O60383 454 aa4.98□□□□□ -1.61
GTDC1-205ENST00000392871 KIF4AO95239 1232 aa4.98□□□□□ -1.61
GTDC1-205ENST00000392871 KRT9P35527 623 aa4.98□□□□□ -1.61
GTDC1-205ENST00000392871 PRPHP41219 470 aa4.98□□□□□ -1.61
GTDC1-205ENST00000392871 HERVK_113P62684 666 aa4.98□□□□□ -1.61
GTDC1-205ENST00000392871 ZNF543Q08ER8 600 aa4.98□□□□□ -1.61
GTDC1-205ENST00000392871 LRRC41Q15345 812 aa4.98□□□□□ -1.61
GTDC1-205ENST00000392871 FILIP1LQ4L180 1135 aa4.98□□□□□ -1.61
GTDC1-205ENST00000392871 APOBEC3HQ6NTF7 200 aaKnown RBP4.98□□□□□ -1.61
GTDC1-205ENST00000392871 REC114Q7Z4M0 266 aa4.98□□□□□ -1.61
GTDC1-205ENST00000392871 SMAP1Q8IYB5 467 aaPredicted RBP4.98□□□□□ -1.61
GTDC1-205ENST00000392871 CSGALNACT2Q8N6G5 542 aa4.98□□□□□ -1.61
GTDC1-205ENST00000392871 SUPT20HQ8NEM7 779 aa4.98□□□□□ -1.61
GTDC1-205ENST00000392871 NLGN2Q8NFZ4 835 aa4.98□□□□□ -1.61
GTDC1-205ENST00000392871 GRIN3AQ8TCU5 1115 aa4.98□□□□□ -1.61
GTDC1-205ENST00000392871 CNOT6LQ96LI5 555 aaKnown RBP4.98□□□□□ -1.61
GTDC1-205ENST00000392871 LRRC3Q9BY71 257 aa4.98□□□□□ -1.61
GTDC1-205ENST00000392871 RIOX1Q9H6W3 641 aa4.98□□□□□ -1.61
GTDC1-205ENST00000392871 PRDM16Q9HAZ2 1276 aa4.98□□□□□ -1.61
GTDC1-205ENST00000392871 ZNF277Q9NRM2 450 aaPredicted RBP4.98□□□□□ -1.61
GTDC1-205ENST00000392871 AGPAT5Q9NUQ2 364 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms