RNA–Protein interactions for RNA: ENST00000392346.6

CCDC57-205, Transcript of coiled-coil domain containing 57, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CCDC57, Length 2,964 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-205ENST00000392346 USP40Q9NVE5 1235 aa12.52□□□□□ -0.4
CCDC57-205ENST00000392346 MKS1Q9NXB0 559 aa12.52□□□□□ -0.4
CCDC57-205ENST00000392346 PPP1R9AQ9ULJ8 1098 aa12.52□□□□□ -0.4
CCDC57-205ENST00000392346 NRXN2Q9P2S2 1712 aa12.52□□□□□ -0.4
CCDC57-205ENST00000392346 PNMA6FA0A0J9YX94 578 aa12.52□□□□□ -0.41
CCDC57-205ENST00000392346 RBAK-RBAKDNI3L0D1 243 aa12.52□□□□□ -0.41
CCDC57-205ENST00000392346 CYP2J2P51589 502 aa12.52□□□□□ -0.41
CCDC57-205ENST00000392346 SLC12A3P55017 1021 aa12.52□□□□□ -0.41
CCDC57-205ENST00000392346 DCAF12L1Q5VU92 463 aa12.52□□□□□ -0.41
CCDC57-205ENST00000392346 DPY19L2P1Q6NXN4 242 aa12.52□□□□□ -0.41
CCDC57-205ENST00000392346 PEX26Q7Z412 305 aa12.52□□□□□ -0.41
CCDC57-205ENST00000392346 CCDC65Q8IXS2 484 aa12.52□□□□□ -0.41
CCDC57-205ENST00000392346 ZSWIM2Q8NEG5 633 aa12.52□□□□□ -0.41
CCDC57-205ENST00000392346 LNX1Q8TBB1 728 aaPredicted RBP12.52□□□□□ -0.41
CCDC57-205ENST00000392346 SREK1Q8WXA9 508 aaKnown RBP12.52□□□□□ -0.41
CCDC57-205ENST00000392346 ARMCX3Q9UH62 379 aaPredicted RBP12.52□□□□□ -0.41
CCDC57-205ENST00000392346 CENPFP49454 3210 aa12.52□□□□□ -0.41
CCDC57-205ENST00000392346 CETN3O15182 167 aa12.51□□□□□ -0.41
CCDC57-205ENST00000392346 C21orf2O43822 256 aa12.51□□□□□ -0.41
CCDC57-205ENST00000392346 FGFR1OPO95684 399 aaKnown RBP12.51□□□□□ -0.41
CCDC57-205ENST00000392346 FGGP02679 453 aa12.51□□□□□ -0.41
CCDC57-205ENST00000392346 MDH1P40925 334 aaKnown RBP12.51□□□□□ -0.41
CCDC57-205ENST00000392346 MAGOHP61326 146 aaKnown RBP12.51□□□□□ -0.41
CCDC57-205ENST00000392346 GIT2Q14161 759 aa12.51□□□□□ -0.41
CCDC57-205ENST00000392346 ALS2CLQ60I27 953 aa12.51□□□□□ -0.41
CCDC57-205ENST00000392346 ZCCHC8Q6NZY4 707 aaKnown RBP12.51□□□□□ -0.41
CCDC57-205ENST00000392346 TBC1D16Q8TBP0 767 aa12.51□□□□□ -0.41
CCDC57-205ENST00000392346 MAGOHBQ96A72 148 aaKnown RBP12.51□□□□□ -0.41
CCDC57-205ENST00000392346 JPH2Q9BR39 696 aaPredicted RBP12.51□□□□□ -0.41
CCDC57-205ENST00000392346 TAF1DQ9H5J8 278 aaPredicted RBP12.51□□□□□ -0.41
CCDC57-205ENST00000392346 SYNPO2Q9UMS6 1093 aa12.51□□□□□ -0.41
CCDC57-205ENST00000392346 PPP1R12AO14974 1030 aaPredicted RBP12.51□□□□□ -0.41
CCDC57-205ENST00000392346 TTLL1O95922 423 aa12.51□□□□□ -0.41
CCDC57-205ENST00000392346 CLK2P49760 499 aaKnown RBP12.51□□□□□ -0.41
CCDC57-205ENST00000392346 SKOR1P84550 965 aa12.51□□□□□ -0.41
CCDC57-205ENST00000392346 CCDC38Q502W7 563 aa12.51□□□□□ -0.41
CCDC57-205ENST00000392346 STYK1Q6J9G0 422 aa12.51□□□□□ -0.41
CCDC57-205ENST00000392346 MMS22LQ6ZRQ5 1243 aa12.51□□□□□ -0.41
CCDC57-205ENST00000392346 DPH6Q7L8W6 267 aa12.51□□□□□ -0.41
CCDC57-205ENST00000392346 LRRC57Q8N9N7 239 aa12.51□□□□□ -0.41
CCDC57-205ENST00000392346 TPCN2Q8NHX9 752 aa12.51□□□□□ -0.41
CCDC57-205ENST00000392346 DNAJC17Q9NVM6 304 aaKnown RBP12.51□□□□□ -0.41
CCDC57-205ENST00000392346 SERPINB13Q9UIV8 391 aa12.51□□□□□ -0.41
CCDC57-205ENST00000392346 SCAF8Q9UPN6 1271 aaKnown RBP12.51□□□□□ -0.41
CCDC57-205ENST00000392346 ASTN1O14525 1302 aa12.51□□□□□ -0.41
CCDC57-205ENST00000392346 DDX39AO00148 427 aaKnown RBP12.51□□□□□ -0.41
CCDC57-205ENST00000392346 ZBTB5O15062 677 aa12.51□□□□□ -0.41
CCDC57-205ENST00000392346 BUB1BO60566 1050 aaPredicted RBP12.51□□□□□ -0.41
CCDC57-205ENST00000392346 KIAA0754O94854 1291 aa12.51□□□□□ -0.41
CCDC57-205ENST00000392346 SPATA31C1P0DKV0 1188 aa12.51□□□□□ -0.41
CCDC57-205ENST00000392346 JAG1P78504 1218 aa12.51□□□□□ -0.41
CCDC57-205ENST00000392346 KRT71Q3SY84 523 aa12.51□□□□□ -0.41
CCDC57-205ENST00000392346 C4orf46Q504U0 113 aa12.51□□□□□ -0.41
CCDC57-205ENST00000392346 KDM7AQ6ZMT4 941 aa12.51□□□□□ -0.41
CCDC57-205ENST00000392346 KIAA0825Q8IV33 1275 aa12.51□□□□□ -0.41
CCDC57-205ENST00000392346 OGFOD1Q8N543 542 aa12.51□□□□□ -0.41
CCDC57-205ENST00000392346 BTBD6Q96KE9 485 aa12.51□□□□□ -0.41
CCDC57-205ENST00000392346 EPN3Q9H201 632 aa12.51□□□□□ -0.41
CCDC57-205ENST00000392346 DBNDD1Q9H9R9 158 aa12.51□□□□□ -0.41
CCDC57-205ENST00000392346 MLXIPLQ9NP71 852 aa12.51□□□□□ -0.41
CCDC57-205ENST00000392346 SIX2Q9NPC8 291 aa12.51□□□□□ -0.41
CCDC57-205ENST00000392346 LEMD3Q9Y2U8 911 aa12.51□□□□□ -0.41
CCDC57-205ENST00000392346 EPB41P11171 864 aaKnown RBP12.5□□□□□ -0.41
CCDC57-205ENST00000392346 XRCC5P13010 732 aaKnown RBP12.5□□□□□ -0.41
CCDC57-205ENST00000392346 EEF2P13639 858 aaKnown RBP12.5□□□□□ -0.41
CCDC57-205ENST00000392346 GALCP54803 685 aa12.5□□□□□ -0.41
CCDC57-205ENST00000392346 ITIH3Q06033 890 aa12.5□□□□□ -0.41
CCDC57-205ENST00000392346 SEPT2Q15019 361 aa12.5□□□□□ -0.41
CCDC57-205ENST00000392346 CBWD6Q4V339 395 aa12.5□□□□□ -0.41
CCDC57-205ENST00000392346 CBWD3Q5JTY5 395 aa12.5□□□□□ -0.41
CCDC57-205ENST00000392346 CBWD5Q5RIA9 395 aa12.5□□□□□ -0.41
CCDC57-205ENST00000392346 PHLDB2Q86SQ0 1253 aa12.5□□□□□ -0.41
CCDC57-205ENST00000392346 KIRREL3Q8IZU9 778 aa12.5□□□□□ -0.41
CCDC57-205ENST00000392346 RNF10Q8N5U6 811 aaKnown RBP12.5□□□□□ -0.41
CCDC57-205ENST00000392346 CYFIP2Q96F07 1278 aa12.5□□□□□ -0.41
CCDC57-205ENST00000392346 ZNF287Q9HBT7 754 aa12.5□□□□□ -0.41
CCDC57-205ENST00000392346 RBM47A0AV96 593 aaKnown RBP12.5□□□□□ -0.41
CCDC57-205ENST00000392346 ESYT2A0FGR8 921 aa12.5□□□□□ -0.41
CCDC57-205ENST00000392346 H0YGN5 161 aa12.5□□□□□ -0.41
CCDC57-205ENST00000392346 MEFVO15553 781 aaPredicted RBP12.5□□□□□ -0.41
CCDC57-205ENST00000392346 EVI5O60447 810 aa12.5□□□□□ -0.41
CCDC57-205ENST00000392346 AFPP02771 609 aaKnown RBP12.5□□□□□ -0.41
CCDC57-205ENST00000392346 NR3C1P04150 777 aa12.5□□□□□ -0.41
CCDC57-205ENST00000392346 NPR1P16066 1061 aa12.5□□□□□ -0.41
CCDC57-205ENST00000392346 ALDH1B1P30837 517 aa12.5□□□□□ -0.41
CCDC57-205ENST00000392346 USP11P51784 963 aa12.5□□□□□ -0.41
CCDC57-205ENST00000392346 TNNC1P63316 161 aa12.5□□□□□ -0.41
CCDC57-205ENST00000392346 GABPAQ06546 454 aa12.5□□□□□ -0.41
CCDC57-205ENST00000392346 PDIA5Q14554 519 aa12.5□□□□□ -0.41
CCDC57-205ENST00000392346 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.5□□□□□ -0.41
CCDC57-205ENST00000392346 SLC20A1Q8WUM9 679 aa12.5□□□□□ -0.41
CCDC57-205ENST00000392346 TMBIM4Q9HC24 238 aa12.5□□□□□ -0.41
CCDC57-205ENST00000392346 NFS1Q9Y697 457 aa12.5□□□□□ -0.41
CCDC57-205ENST00000392346 IVNS1ABPQ9Y6Y0 642 aa12.5□□□□□ -0.41
CCDC57-205ENST00000392346 DDTLA6NHG4 134 aaPredicted RBP12.49□□□□□ -0.41
CCDC57-205ENST00000392346 MEIS2O14770 477 aa12.49□□□□□ -0.41
CCDC57-205ENST00000392346 FNTAP49354 379 aa12.49□□□□□ -0.41
CCDC57-205ENST00000392346 ARHGAP4P98171 946 aa12.49□□□□□ -0.41
CCDC57-205ENST00000392346 ADCY1Q08828 1119 aa12.49□□□□□ -0.41
CCDC57-205ENST00000392346 ASPRV1Q53RT3 343 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms