RNA–Protein interactions for RNA: ENST00000392185.7

SNX9-201, Transcript of sorting nexin 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX9, Length 4,198 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9-201ENST00000392185 MAIP1Q8WWC4 291 aa17.79■□□□□ 0.44
SNX9-201ENST00000392185 KIAA1586Q9HCI6 787 aa17.79■□□□□ 0.44
SNX9-201ENST00000392185 ADAM22Q9P0K1 906 aa17.79■□□□□ 0.44
SNX9-201ENST00000392185 CNOT8Q9UFF9 292 aaKnown RBP17.79■□□□□ 0.44
SNX9-201ENST00000392185 INPP5FQ9Y2H2 1132 aa17.79■□□□□ 0.44
SNX9-201ENST00000392185 CD2APQ9Y5K6 639 aa17.79■□□□□ 0.44
SNX9-201ENST00000392185 WNT7AO00755 349 aa17.79■□□□□ 0.44
SNX9-201ENST00000392185 ACTR2P61160 394 aa17.79■□□□□ 0.44
SNX9-201ENST00000392185 RNASELQ05823 741 aaKnown RBP17.79■□□□□ 0.44
SNX9-201ENST00000392185 NKX2-3Q8TAU0 364 aa17.79■□□□□ 0.44
SNX9-201ENST00000392185 MRPL4Q9BYD3 311 aaKnown RBP17.79■□□□□ 0.44
SNX9-201ENST00000392185 TRIM10Q9UDY6 481 aa17.79■□□□□ 0.44
SNX9-201ENST00000392185 ZNF699Q32M78 642 aa17.79■□□□□ 0.44
SNX9-201ENST00000392185 PDXDC1Q6P996 788 aa17.79■□□□□ 0.44
SNX9-201ENST00000392185 FBXL13Q8NEE6 735 aa17.79■□□□□ 0.44
SNX9-201ENST00000392185 IL17RAQ96F46 866 aa17.79■□□□□ 0.44
SNX9-201ENST00000392185 VPS37BQ9H9H4 285 aa17.79■□□□□ 0.44
SNX9-201ENST00000392185 TFR2Q9UP52 801 aa17.79■□□□□ 0.44
SNX9-201ENST00000392185 MYO1EQ12965 1108 aa17.78■□□□□ 0.44
SNX9-201ENST00000392185 DGKZQ13574 1117 aa17.78■□□□□ 0.44
SNX9-201ENST00000392185 GPD1LQ8N335 351 aa17.78■□□□□ 0.44
SNX9-201ENST00000392185 CALN1Q9BXU9 219 aa17.78■□□□□ 0.44
SNX9-201ENST00000392185 KIAA1683Q9H0B3 1180 aa17.78■□□□□ 0.44
SNX9-201ENST00000392185 SUCLA2Q9P2R7 463 aaPredicted RBP17.78■□□□□ 0.44
SNX9-201ENST00000392185 ANAPC7Q9UJX3 599 aa17.78■□□□□ 0.44
SNX9-201ENST00000392185 PDE4DIPQ5VU43 2346 aa17.78■□□□□ 0.44
SNX9-201ENST00000392185 VIMP08670 466 aaKnown RBP17.78■□□□□ 0.44
SNX9-201ENST00000392185 PLS3P13797 630 aa17.78■□□□□ 0.44
SNX9-201ENST00000392185 CHST13Q8NET6 341 aa17.78■□□□□ 0.44
SNX9-201ENST00000392185 TARS2Q9BW92 718 aaKnown RBP17.78■□□□□ 0.44
SNX9-201ENST00000392185 TACC3Q9Y6A5 838 aa17.78■□□□□ 0.44
SNX9-201ENST00000392185 PITPNM2Q9BZ72 1349 aa17.78■□□□□ 0.44
SNX9-201ENST00000392185 SURF1Q15526 300 aa17.78■□□□□ 0.44
SNX9-201ENST00000392185 GPRC5AQ8NFJ5 357 aa17.78■□□□□ 0.44
SNX9-201ENST00000392185 OR6J1Q8NGC5 347 aa17.78■□□□□ 0.44
SNX9-201ENST00000392185 POLR3CQ9BUI4 534 aaPredicted RBP17.78■□□□□ 0.44
SNX9-201ENST00000392185 LRRD1A4D1F6 860 aa17.77■□□□□ 0.44
SNX9-201ENST00000392185 FTLP02792 175 aaPredicted RBP17.77■□□□□ 0.44
SNX9-201ENST00000392185 ARL1P40616 181 aaPredicted RBP17.77■□□□□ 0.44
SNX9-201ENST00000392185 EMC2Q15006 297 aa17.77■□□□□ 0.44
SNX9-201ENST00000392185 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP17.77■□□□□ 0.44
SNX9-201ENST00000392185 FHOD1Q9Y613 1164 aa17.77■□□□□ 0.44
SNX9-201ENST00000392185 YDJCA8MPS7 323 aa17.77■□□□□ 0.44
SNX9-201ENST00000392185 NCAPHQ15003 741 aa17.77■□□□□ 0.44
SNX9-201ENST00000392185 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.77■□□□□ 0.43
SNX9-201ENST00000392185 C6orf222P0C671 652 aaPredicted RBP17.77■□□□□ 0.43
SNX9-201ENST00000392185 UCHL3P15374 230 aa17.77■□□□□ 0.43
SNX9-201ENST00000392185 PLTPP55058 493 aa17.77■□□□□ 0.43
SNX9-201ENST00000392185 CDO1Q16878 200 aa17.77■□□□□ 0.43
SNX9-201ENST00000392185 DENND2CQ68D51 928 aa17.77■□□□□ 0.43
SNX9-201ENST00000392185 NFRKBQ6P4R8 1299 aa17.77■□□□□ 0.43
SNX9-201ENST00000392185 KCNK18Q7Z418 384 aa17.77■□□□□ 0.43
SNX9-201ENST00000392185 PNMA8AQ86V59 439 aaPredicted RBP17.77■□□□□ 0.43
SNX9-201ENST00000392185 ERICH1Q86X53 443 aa17.77■□□□□ 0.43
SNX9-201ENST00000392185 CTAGE3PQ8IX95 158 aa17.77■□□□□ 0.43
SNX9-201ENST00000392185 PDE11AQ9HCR9 933 aa17.77■□□□□ 0.43
SNX9-201ENST00000392185 PPANQ9NQ55 473 aaKnown RBP17.77■□□□□ 0.43
SNX9-201ENST00000392185 NKIRAS1Q9NYS0 192 aa17.77■□□□□ 0.43
SNX9-201ENST00000392185 ROBO1Q9Y6N7 1651 aa17.77■□□□□ 0.43
SNX9-201ENST00000392185 ZBTB39O15060 712 aa17.76■□□□□ 0.43
SNX9-201ENST00000392185 CYP26A1O43174 497 aa17.76■□□□□ 0.43
SNX9-201ENST00000392185 PRKCBP05771 671 aa17.76■□□□□ 0.43
SNX9-201ENST00000392185 PNMA6AP0CW24 399 aaPredicted RBP17.76■□□□□ 0.43
SNX9-201ENST00000392185 KRT15P19012 456 aa17.76■□□□□ 0.43
SNX9-201ENST00000392185 CIITAP33076 1130 aa17.76■□□□□ 0.43
SNX9-201ENST00000392185 COPB2P35606 906 aa17.76■□□□□ 0.43
SNX9-201ENST00000392185 FMO5P49326 533 aa17.76■□□□□ 0.43
SNX9-201ENST00000392185 CASP4P49662 377 aa17.76■□□□□ 0.43
SNX9-201ENST00000392185 ARPP19P56211 112 aa17.76■□□□□ 0.43
SNX9-201ENST00000392185 ZNF211Q13398 564 aaPredicted RBP17.76■□□□□ 0.43
SNX9-201ENST00000392185 TRIP13Q15645 432 aaPredicted RBP17.76■□□□□ 0.43
SNX9-201ENST00000392185 EDRF1Q3B7T1 1238 aa17.76■□□□□ 0.43
SNX9-201ENST00000392185 RUFY4Q6ZNE9 571 aa17.76■□□□□ 0.43
SNX9-201ENST00000392185 MRPL47Q9HD33 250 aaKnown RBP17.76■□□□□ 0.43
SNX9-201ENST00000392185 NGRNQ9NPE2 291 aaKnown RBP17.76■□□□□ 0.43
SNX9-201ENST00000392185 DAAM1Q9Y4D1 1078 aa17.76■□□□□ 0.43
SNX9-201ENST00000392185 PHLPP1O60346 1717 aa17.76■□□□□ 0.43
SNX9-201ENST00000392185 TMEM150BA6NC51 233 aa17.76■□□□□ 0.43
SNX9-201ENST00000392185 H7C0C1 242 aa17.76■□□□□ 0.43
SNX9-201ENST00000392185 ATP5OP48047 213 aa17.76■□□□□ 0.43
SNX9-201ENST00000392185 SNRNP35Q16560 246 aaKnown RBP17.76■□□□□ 0.43
SNX9-201ENST00000392185 SGO2Q562F6 1265 aa17.76■□□□□ 0.43
SNX9-201ENST00000392185 TRIM50Q86XT4 487 aa17.76■□□□□ 0.43
SNX9-201ENST00000392185 SCFD2Q8WU76 684 aa17.76■□□□□ 0.43
SNX9-201ENST00000392185 EIF3CLB5ME19 914 aaKnown RBP17.76■□□□□ 0.43
SNX9-201ENST00000392185 EBAG9O00559 213 aa17.76■□□□□ 0.43
SNX9-201ENST00000392185 SLC25A27O95847 323 aa17.76■□□□□ 0.43
SNX9-201ENST00000392185 FGGP02679 453 aa17.76■□□□□ 0.43
SNX9-201ENST00000392185 ATP1A2P50993 1020 aa17.76■□□□□ 0.43
SNX9-201ENST00000392185 PMS1P54277 932 aaKnown RBP17.76■□□□□ 0.43
SNX9-201ENST00000392185 C10orf76Q5T2E6 689 aa17.76■□□□□ 0.43
SNX9-201ENST00000392185 KCTD16Q68DU8 428 aa17.76■□□□□ 0.43
SNX9-201ENST00000392185 TTI2Q6NXR4 508 aa17.76■□□□□ 0.43
SNX9-201ENST00000392185 RSRC2Q7L4I2 434 aaKnown RBP17.76■□□□□ 0.43
SNX9-201ENST00000392185 FAM81BQ96LP2 452 aa17.76■□□□□ 0.43
SNX9-201ENST00000392185 EIF3CQ99613 913 aaKnown RBP17.76■□□□□ 0.43
SNX9-201ENST00000392185 TOPAZ1Q8N9V7 1692 aa17.76■□□□□ 0.43
SNX9-201ENST00000392185 MAFGO15525 162 aa17.76■□□□□ 0.43
SNX9-201ENST00000392185 FKBP1AP62942 108 aaKnown RBP17.76■□□□□ 0.43
SNX9-201ENST00000392185 ZBTB16Q05516 673 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms