RNA–Protein interactions for RNA: ENST00000390485.1

TRAJ53-201, Transcript of T cell receptor alpha joining 53, humanhuman

APPRIS P1 BASIC

Gene TRAJ53, Length 66 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ53-201ENST00000390485 KRIT1O00522 736 aa0.6□□□□□ -2.31
TRAJ53-201ENST00000390485 SLC27A2O14975 620 aa0.6□□□□□ -2.31
TRAJ53-201ENST00000390485 GRID2O43424 1007 aa0.6□□□□□ -2.31
TRAJ53-201ENST00000390485 TP53P04637 393 aaPredicted RBP0.6□□□□□ -2.31
TRAJ53-201ENST00000390485 CD1AP06126 327 aa0.6□□□□□ -2.31
TRAJ53-201ENST00000390485 TGFB3P10600 412 aa0.6□□□□□ -2.31
TRAJ53-201ENST00000390485 ITGAMP11215 1152 aa0.6□□□□□ -2.31
TRAJ53-201ENST00000390485 HK1P19367 917 aa0.6□□□□□ -2.31
TRAJ53-201ENST00000390485 GPD1P21695 349 aa0.6□□□□□ -2.31
TRAJ53-201ENST00000390485 GARTP22102 1010 aa0.6□□□□□ -2.31
TRAJ53-201ENST00000390485 DDX6P26196 483 aaKnown RBP eCLIP0.6□□□□□ -2.31
TRAJ53-201ENST00000390485 TFF2Q03403 129 aa0.6□□□□□ -2.31
TRAJ53-201ENST00000390485 TUSC3Q13454 348 aa0.6□□□□□ -2.31
TRAJ53-201ENST00000390485 NPY5RQ15761 445 aa0.6□□□□□ -2.31
TRAJ53-201ENST00000390485 CWF19L2Q2TBE0 894 aaKnown RBP0.6□□□□□ -2.31
TRAJ53-201ENST00000390485 SEZ6Q53EL9 994 aa0.6□□□□□ -2.31
TRAJ53-201ENST00000390485 AKNAD1Q5T1N1 836 aa0.6□□□□□ -2.31
TRAJ53-201ENST00000390485 OTUD3Q5T2D3 398 aaPredicted RBP0.6□□□□□ -2.31
TRAJ53-201ENST00000390485 IRF2BP2Q7Z5L9 587 aa0.6□□□□□ -2.31
TRAJ53-201ENST00000390485 APBB1IPQ7Z5R6 666 aaPredicted RBP0.6□□□□□ -2.31
TRAJ53-201ENST00000390485 PLXDC1Q8IUK5 500 aa0.6□□□□□ -2.31
TRAJ53-201ENST00000390485 NPLOC4Q8TAT6 608 aa0.6□□□□□ -2.31
TRAJ53-201ENST00000390485 RCC1LQ96I51 464 aaKnown RBP0.6□□□□□ -2.31
TRAJ53-201ENST00000390485 ZNF414Q96IQ9 312 aa0.6□□□□□ -2.31
TRAJ53-201ENST00000390485 FRMD6Q96NE9 622 aa0.6□□□□□ -2.31
TRAJ53-201ENST00000390485 DCLRE1CQ96SD1 692 aaKnown RBP0.6□□□□□ -2.31
TRAJ53-201ENST00000390485 NDC1Q9BTX1 674 aa0.6□□□□□ -2.31
TRAJ53-201ENST00000390485 VPS16Q9H269 839 aa0.6□□□□□ -2.31
TRAJ53-201ENST00000390485 CDIP1Q9H305 208 aa0.6□□□□□ -2.31
TRAJ53-201ENST00000390485 TRPM5Q9NZQ8 1165 aa0.6□□□□□ -2.31
TRAJ53-201ENST00000390485 CGGBP1Q9UFW8 167 aaPredicted RBP0.6□□□□□ -2.31
TRAJ53-201ENST00000390485 CRCT1Q9UGL9 99 aa0.6□□□□□ -2.31
TRAJ53-201ENST00000390485 VWA7Q9Y334 891 aa0.6□□□□□ -2.31
TRAJ53-201ENST00000390485 ENTPD2Q9Y5L3 495 aa0.6□□□□□ -2.31
TRAJ53-201ENST00000390485 TTC3P53804 2025 aa0.6□□□□□ -2.31
TRAJ53-201ENST00000390485 LINC01565O15544 149 aa0.59□□□□□ -2.31
TRAJ53-201ENST00000390485 MYO1BO43795 1136 aa0.59□□□□□ -2.31
TRAJ53-201ENST00000390485 ZSCAN20P17040 1043 aaPredicted RBP0.59□□□□□ -2.31
TRAJ53-201ENST00000390485 EPHB2P29323 1055 aa0.59□□□□□ -2.31
TRAJ53-201ENST00000390485 APOBEC3AP31941 199 aaPredicted RBP0.59□□□□□ -2.31
TRAJ53-201ENST00000390485 PLCD1P51178 756 aa0.59□□□□□ -2.31
TRAJ53-201ENST00000390485 NPEPPSP55786 919 aa0.59□□□□□ -2.31
TRAJ53-201ENST00000390485 MRPS35P82673 323 aaKnown RBP0.59□□□□□ -2.31
TRAJ53-201ENST00000390485 EXOSC10Q01780 885 aaKnown RBP0.59□□□□□ -2.31
TRAJ53-201ENST00000390485 DBPQ10586 325 aaPredicted RBP0.59□□□□□ -2.31
TRAJ53-201ENST00000390485 ADAM15Q13444 863 aa0.59□□□□□ -2.31
TRAJ53-201ENST00000390485 LSAMPQ13449 338 aa0.59□□□□□ -2.31
TRAJ53-201ENST00000390485 MRGPRG-AS1Q2M3A8 158 aa0.59□□□□□ -2.31
TRAJ53-201ENST00000390485 GAGE13Q4V321 117 aa0.59□□□□□ -2.31
TRAJ53-201ENST00000390485 KANK2Q63ZY3 851 aa0.59□□□□□ -2.31
TRAJ53-201ENST00000390485 E4F1Q66K89 784 aaPredicted RBP0.59□□□□□ -2.31
TRAJ53-201ENST00000390485 ZNF782Q6ZMW2 699 aaPredicted RBP0.59□□□□□ -2.31
TRAJ53-201ENST00000390485 OTOP2Q7RTS6 562 aa0.59□□□□□ -2.31
TRAJ53-201ENST00000390485 YTHDF3Q7Z739 585 aaKnown RBP0.59□□□□□ -2.31
TRAJ53-201ENST00000390485 CCDC103Q8IW40 242 aa0.59□□□□□ -2.31
TRAJ53-201ENST00000390485 RBM12BQ8IXT5 1001 aaKnown RBP0.59□□□□□ -2.31
TRAJ53-201ENST00000390485 ZBTB38Q8NAP3 1195 aaPredicted RBP0.59□□□□□ -2.31
TRAJ53-201ENST00000390485 ADCY4Q8NFM4 1077 aa0.59□□□□□ -2.31
TRAJ53-201ENST00000390485 PBXIP1Q96AQ6 731 aa0.59□□□□□ -2.31
TRAJ53-201ENST00000390485 SLC7A6OSQ96CW6 309 aaPredicted RBP0.59□□□□□ -2.31
TRAJ53-201ENST00000390485 RPL10LQ96L21 214 aaKnown RBP0.59□□□□□ -2.31
TRAJ53-201ENST00000390485 Q96MF0 132 aa0.59□□□□□ -2.31
TRAJ53-201ENST00000390485 GATA5Q9BWX5 397 aaPredicted RBP0.59□□□□□ -2.31
TRAJ53-201ENST00000390485 KLHL25Q9H0H3 589 aa0.59□□□□□ -2.31
TRAJ53-201ENST00000390485 SMURF1Q9HCE7 757 aa0.59□□□□□ -2.31
TRAJ53-201ENST00000390485 LRIT1Q9P2V4 623 aa0.59□□□□□ -2.31
TRAJ53-201ENST00000390485 CBLCQ9ULV8 474 aa0.59□□□□□ -2.31
TRAJ53-201ENST00000390485 TIMELESSQ9UNS1 1208 aa0.59□□□□□ -2.31
TRAJ53-201ENST00000390485 TELO2Q9Y4R8 837 aa0.59□□□□□ -2.31
TRAJ53-201ENST00000390485 AFG3L2Q9Y4W6 797 aa0.59□□□□□ -2.31
TRAJ53-201ENST00000390485 SOCS2O14508 198 aa0.58□□□□□ -2.32
TRAJ53-201ENST00000390485 GNAT2P19087 354 aa0.58□□□□□ -2.32
TRAJ53-201ENST00000390485 SFPQP23246 707 aaKnown RBP eCLIP0.58□□□□□ -2.32
TRAJ53-201ENST00000390485 CERS1P27544 350 aa0.58□□□□□ -2.32
TRAJ53-201ENST00000390485 MMP13P45452 471 aa0.58□□□□□ -2.32
TRAJ53-201ENST00000390485 STAT5BP51692 787 aa0.58□□□□□ -2.32
TRAJ53-201ENST00000390485 EPHA5P54756 1037 aa0.58□□□□□ -2.32
TRAJ53-201ENST00000390485 SOX10P56693 466 aa0.58□□□□□ -2.32
TRAJ53-201ENST00000390485 CYP4F3Q08477 520 aa0.58□□□□□ -2.32
TRAJ53-201ENST00000390485 RABEP1Q15276 862 aa0.58□□□□□ -2.32
TRAJ53-201ENST00000390485 TESK1Q15569 626 aa0.58□□□□□ -2.32
TRAJ53-201ENST00000390485 SYT12Q8IV01 421 aa0.58□□□□□ -2.32
TRAJ53-201ENST00000390485 BCL6BQ8N143 479 aaPredicted RBP0.58□□□□□ -2.32
TRAJ53-201ENST00000390485 ANKRD53Q8N9V6 530 aa0.58□□□□□ -2.32
TRAJ53-201ENST00000390485 GOLM1Q8NBJ4 401 aa0.58□□□□□ -2.32
TRAJ53-201ENST00000390485 OR52N2Q8NGI0 321 aa0.58□□□□□ -2.32
TRAJ53-201ENST00000390485 PIP4K2CQ8TBX8 421 aa0.58□□□□□ -2.32
TRAJ53-201ENST00000390485 ACTRT2Q8TDY3 377 aa0.58□□□□□ -2.32
TRAJ53-201ENST00000390485 RNF34Q969K3 372 aa0.58□□□□□ -2.32
TRAJ53-201ENST00000390485 THOC3Q96J01 351 aaKnown RBP0.58□□□□□ -2.32
TRAJ53-201ENST00000390485 FAM84BQ96KN1 310 aaPredicted RBP0.58□□□□□ -2.32
TRAJ53-201ENST00000390485 HEPHQ9BQS7 1158 aa0.58□□□□□ -2.32
TRAJ53-201ENST00000390485 PDCD2LQ9BRP1 358 aa0.58□□□□□ -2.32
TRAJ53-201ENST00000390485 GALNT8Q9NY28 637 aa0.58□□□□□ -2.32
TRAJ53-201ENST00000390485 WWC3Q9ULE0 1092 aa0.58□□□□□ -2.32
TRAJ53-201ENST00000390485 AHNAK2Q8IVF2 5795 aa0.58□□□□□ -2.32
TRAJ53-201ENST00000390485 IGKV6D-41A0A0C4DH26 115 aa0.57□□□□□ -2.32
TRAJ53-201ENST00000390485 C2orf78A6NCI8 922 aa0.57□□□□□ -2.32
TRAJ53-201ENST00000390485 FAM86C2PA6NEL3 165 aa0.57□□□□□ -2.32
TRAJ53-201ENST00000390485 CD8B2A6NJW9 211 aa0.57□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms